Experiment: Thallium(I) acetate 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_00060 and AO353_00065 are separated by 174 nucleotides AO353_00065 and AO353_00070 are separated by 297 nucleotides
AO353_00060: AO353_00060 - purine nucleoside permease, at 12,190 to 13,224
_00060
AO353_00065: AO353_00065 - oxidoreductase, at 13,399 to 14,355
_00065
AO353_00070: AO353_00070 - AraC family transcriptional regulator, at 14,653 to 15,441
_00070
Position (kb) 13
14
15 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 12.405 kb on + strand, within AO353_00060 at 12.405 kb on + strand, within AO353_00060 at 12.508 kb on + strand, within AO353_00060 at 12.508 kb on + strand, within AO353_00060 at 12.509 kb on - strand, within AO353_00060 at 12.509 kb on - strand, within AO353_00060 at 12.555 kb on + strand, within AO353_00060 at 12.580 kb on + strand, within AO353_00060 at 12.580 kb on + strand, within AO353_00060 at 12.580 kb on + strand, within AO353_00060 at 12.580 kb on + strand, within AO353_00060 at 12.581 kb on - strand, within AO353_00060 at 12.581 kb on - strand, within AO353_00060 at 12.581 kb on - strand, within AO353_00060 at 12.649 kb on + strand, within AO353_00060 at 12.650 kb on - strand, within AO353_00060 at 12.697 kb on + strand, within AO353_00060 at 12.697 kb on + strand, within AO353_00060 at 12.697 kb on + strand, within AO353_00060 at 12.697 kb on + strand, within AO353_00060 at 12.697 kb on + strand, within AO353_00060 at 12.698 kb on - strand, within AO353_00060 at 12.698 kb on - strand, within AO353_00060 at 12.698 kb on - strand, within AO353_00060 at 12.698 kb on - strand, within AO353_00060 at 12.808 kb on + strand, within AO353_00060 at 12.808 kb on + strand, within AO353_00060 at 12.808 kb on + strand, within AO353_00060 at 12.808 kb on + strand, within AO353_00060 at 12.808 kb on + strand, within AO353_00060 at 12.809 kb on - strand, within AO353_00060 at 12.809 kb on - strand, within AO353_00060 at 12.809 kb on - strand, within AO353_00060 at 12.809 kb on - strand, within AO353_00060 at 12.814 kb on + strand, within AO353_00060 at 12.814 kb on + strand, within AO353_00060 at 12.870 kb on + strand, within AO353_00060 at 12.870 kb on + strand, within AO353_00060 at 12.870 kb on + strand, within AO353_00060 at 12.947 kb on - strand, within AO353_00060 at 12.979 kb on + strand, within AO353_00060 at 12.979 kb on + strand, within AO353_00060 at 12.979 kb on + strand, within AO353_00060 at 12.980 kb on - strand, within AO353_00060 at 12.980 kb on - strand, within AO353_00060 at 12.980 kb on - strand at 12.980 kb on - strand, within AO353_00060 at 12.980 kb on - strand, within AO353_00060 at 12.980 kb on - strand, within AO353_00060 at 12.980 kb on - strand, within AO353_00060 at 12.980 kb on - strand, within AO353_00060 at 13.079 kb on - strand, within AO353_00060 at 13.105 kb on + strand, within AO353_00060 at 13.105 kb on + strand, within AO353_00060 at 13.106 kb on - strand, within AO353_00060 at 13.223 kb on - strand at 13.223 kb on - strand at 13.269 kb on + strand at 13.306 kb on + strand at 13.312 kb on + strand at 13.312 kb on + strand at 13.313 kb on - strand at 13.313 kb on - strand at 13.313 kb on - strand at 13.315 kb on + strand at 13.316 kb on - strand at 13.316 kb on - strand at 13.316 kb on - strand at 13.927 kb on + strand, within AO353_00065 at 13.982 kb on + strand, within AO353_00065 at 13.982 kb on + strand, within AO353_00065 at 13.982 kb on + strand, within AO353_00065 at 13.983 kb on - strand at 14.063 kb on + strand, within AO353_00065 at 14.063 kb on + strand, within AO353_00065 at 14.063 kb on + strand, within AO353_00065 at 14.064 kb on - strand, within AO353_00065 at 14.064 kb on - strand, within AO353_00065 at 14.199 kb on - strand, within AO353_00065 at 14.266 kb on + strand at 14.266 kb on + strand at 14.266 kb on + strand at 14.267 kb on - strand at 14.267 kb on - strand at 14.267 kb on - strand at 14.267 kb on - strand at 14.267 kb on - strand at 14.307 kb on - strand at 14.307 kb on - strand at 14.552 kb on + strand at 14.552 kb on + strand at 14.552 kb on + strand at 14.552 kb on + strand at 14.552 kb on + strand at 14.552 kb on + strand at 14.552 kb on + strand at 14.552 kb on + strand at 14.552 kb on + strand at 14.552 kb on + strand at 14.552 kb on + strand at 14.553 kb on - strand at 14.553 kb on - strand at 14.553 kb on - strand at 14.553 kb on - strand at 14.553 kb on - strand at 14.553 kb on - strand at 14.553 kb on - strand at 14.553 kb on - strand at 14.553 kb on - strand at 14.583 kb on + strand at 14.594 kb on + strand at 14.595 kb on - strand at 14.625 kb on + strand at 14.625 kb on + strand at 14.625 kb on + strand at 14.625 kb on + strand at 14.625 kb on + strand at 14.626 kb on - strand at 14.626 kb on - strand at 14.626 kb on - strand at 14.654 kb on + strand at 14.654 kb on + strand at 14.655 kb on - strand at 14.747 kb on + strand, within AO353_00070 at 15.062 kb on + strand, within AO353_00070 at 15.062 kb on + strand, within AO353_00070 at 15.062 kb on + strand, within AO353_00070 at 15.062 kb on + strand, within AO353_00070 at 15.062 kb on + strand, within AO353_00070 at 15.062 kb on + strand, within AO353_00070 at 15.063 kb on - strand, within AO353_00070 at 15.063 kb on - strand, within AO353_00070 at 15.063 kb on - strand, within AO353_00070 at 15.063 kb on - strand, within AO353_00070 at 15.063 kb on - strand, within AO353_00070 at 15.065 kb on + strand, within AO353_00070 at 15.065 kb on + strand, within AO353_00070 at 15.065 kb on + strand, within AO353_00070 at 15.065 kb on + strand, within AO353_00070 at 15.066 kb on - strand, within AO353_00070 at 15.066 kb on - strand, within AO353_00070 at 15.154 kb on - strand, within AO353_00070 at 15.185 kb on + strand, within AO353_00070 at 15.185 kb on + strand, within AO353_00070 at 15.185 kb on + strand, within AO353_00070 at 15.185 kb on + strand, within AO353_00070 at 15.185 kb on + strand, within AO353_00070 at 15.186 kb on - strand, within AO353_00070 at 15.186 kb on - strand, within AO353_00070 at 15.186 kb on - strand, within AO353_00070 at 15.186 kb on - strand, within AO353_00070 at 15.186 kb on - strand, within AO353_00070 at 15.186 kb on - strand, within AO353_00070 at 15.186 kb on - strand, within AO353_00070 at 15.186 kb on - strand, within AO353_00070 at 15.186 kb on - strand, within AO353_00070 at 15.189 kb on + strand, within AO353_00070 at 15.189 kb on + strand, within AO353_00070 at 15.189 kb on + strand, within AO353_00070 at 15.190 kb on - strand, within AO353_00070 at 15.190 kb on - strand, within AO353_00070 at 15.190 kb on - strand, within AO353_00070 at 15.190 kb on - strand, within AO353_00070 at 15.190 kb on - strand, within AO353_00070 at 15.190 kb on - strand, within AO353_00070 at 15.190 kb on - strand, within AO353_00070 at 15.321 kb on - strand, within AO353_00070 at 15.321 kb on - strand, within AO353_00070 at 15.321 kb on - strand, within AO353_00070
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.016 mg/ml remove 12,405 + AO353_00060 0.21 -0.9 12,405 + AO353_00060 0.21 +1.2 12,508 + AO353_00060 0.31 +0.7 12,508 + AO353_00060 0.31 +0.5 12,509 - AO353_00060 0.31 +1.5 12,509 - AO353_00060 0.31 +1.5 12,555 + AO353_00060 0.35 -0.1 12,580 + AO353_00060 0.38 -0.1 12,580 + AO353_00060 0.38 +0.4 12,580 + AO353_00060 0.38 +0.5 12,580 + AO353_00060 0.38 +1.2 12,581 - AO353_00060 0.38 -0.1 12,581 - AO353_00060 0.38 +0.9 12,581 - AO353_00060 0.38 +1.5 12,649 + AO353_00060 0.44 +1.5 12,650 - AO353_00060 0.44 +0.9 12,697 + AO353_00060 0.49 +1.5 12,697 + AO353_00060 0.49 +2.2 12,697 + AO353_00060 0.49 -0.4 12,697 + AO353_00060 0.49 -2.1 12,697 + AO353_00060 0.49 +0.3 12,698 - AO353_00060 0.49 -0.9 12,698 - AO353_00060 0.49 +1.2 12,698 - AO353_00060 0.49 -0.1 12,698 - AO353_00060 0.49 +0.9 12,808 + AO353_00060 0.60 +2.2 12,808 + AO353_00060 0.60 -0.1 12,808 + AO353_00060 0.60 -0.7 12,808 + AO353_00060 0.60 -2.9 12,808 + AO353_00060 0.60 -0.1 12,809 - AO353_00060 0.60 -2.1 12,809 - AO353_00060 0.60 +0.6 12,809 - AO353_00060 0.60 +2.2 12,809 - AO353_00060 0.60 +1.5 12,814 + AO353_00060 0.60 +0.5 12,814 + AO353_00060 0.60 +1.1 12,870 + AO353_00060 0.66 -1.1 12,870 + AO353_00060 0.66 +0.5 12,870 + AO353_00060 0.66 -0.7 12,947 - AO353_00060 0.73 -1.1 12,979 + AO353_00060 0.76 -0.7 12,979 + AO353_00060 0.76 -0.1 12,979 + AO353_00060 0.76 -0.1 12,980 - AO353_00060 0.76 +0.5 12,980 - AO353_00060 0.76 -2.1 12,980 - -0.1 12,980 - AO353_00060 0.76 -0.1 12,980 - AO353_00060 0.76 +0.9 12,980 - AO353_00060 0.76 -0.6 12,980 - AO353_00060 0.76 +0.5 12,980 - AO353_00060 0.76 +0.6 13,079 - AO353_00060 0.86 +2.0 13,105 + AO353_00060 0.88 +0.9 13,105 + AO353_00060 0.88 +2.5 13,106 - AO353_00060 0.89 -2.1 13,223 - -0.5 13,223 - +0.1 13,269 + -0.6 13,306 + +1.2 13,312 + -0.1 13,312 + +1.7 13,313 - +2.5 13,313 - -2.7 13,313 - -0.1 13,315 + -0.0 13,316 - +0.6 13,316 - +2.0 13,316 - +1.5 13,927 + AO353_00065 0.55 +2.0 13,982 + AO353_00065 0.61 +0.5 13,982 + AO353_00065 0.61 -0.7 13,982 + AO353_00065 0.61 +1.2 13,983 - -0.1 14,063 + AO353_00065 0.69 -0.1 14,063 + AO353_00065 0.69 +0.9 14,063 + AO353_00065 0.69 +0.1 14,064 - AO353_00065 0.69 +1.5 14,064 - AO353_00065 0.69 +1.9 14,199 - AO353_00065 0.84 +1.0 14,266 + -1.1 14,266 + +0.7 14,266 + +0.7 14,267 - +0.2 14,267 - +2.0 14,267 - +1.2 14,267 - -0.7 14,267 - +0.5 14,307 - -1.1 14,307 - +1.9 14,552 + +0.9 14,552 + -0.7 14,552 + +2.2 14,552 + +0.5 14,552 + -0.4 14,552 + -1.1 14,552 + -0.7 14,552 + -0.6 14,552 + +0.6 14,552 + +1.9 14,552 + -1.7 14,553 - -0.1 14,553 - -0.5 14,553 - +0.3 14,553 - +0.9 14,553 - -1.1 14,553 - -0.5 14,553 - -0.1 14,553 - +2.7 14,553 - -0.7 14,583 + +0.6 14,594 + +0.9 14,595 - -0.1 14,625 + -0.7 14,625 + -0.1 14,625 + -0.7 14,625 + +1.5 14,625 + +1.9 14,626 - -0.1 14,626 - +0.5 14,626 - +0.5 14,654 + -1.1 14,654 + -1.1 14,655 - -0.1 14,747 + AO353_00070 0.12 -1.5 15,062 + AO353_00070 0.52 +1.5 15,062 + AO353_00070 0.52 -1.7 15,062 + AO353_00070 0.52 +2.7 15,062 + AO353_00070 0.52 +0.5 15,062 + AO353_00070 0.52 +0.9 15,062 + AO353_00070 0.52 +0.9 15,063 - AO353_00070 0.52 +0.9 15,063 - AO353_00070 0.52 -0.9 15,063 - AO353_00070 0.52 -0.9 15,063 - AO353_00070 0.52 -0.1 15,063 - AO353_00070 0.52 -1.7 15,065 + AO353_00070 0.52 +1.7 15,065 + AO353_00070 0.52 -0.1 15,065 + AO353_00070 0.52 +0.4 15,065 + AO353_00070 0.52 -0.1 15,066 - AO353_00070 0.52 -0.5 15,066 - AO353_00070 0.52 -1.1 15,154 - AO353_00070 0.63 +0.5 15,185 + AO353_00070 0.67 -1.1 15,185 + AO353_00070 0.67 +0.5 15,185 + AO353_00070 0.67 -0.5 15,185 + AO353_00070 0.67 +0.3 15,185 + AO353_00070 0.67 +2.2 15,186 - AO353_00070 0.68 +1.6 15,186 - AO353_00070 0.68 +0.3 15,186 - AO353_00070 0.68 -0.4 15,186 - AO353_00070 0.68 +1.9 15,186 - AO353_00070 0.68 -0.9 15,186 - AO353_00070 0.68 +0.2 15,186 - AO353_00070 0.68 +0.9 15,186 - AO353_00070 0.68 +0.2 15,186 - AO353_00070 0.68 -0.1 15,189 + AO353_00070 0.68 +0.3 15,189 + AO353_00070 0.68 +0.5 15,189 + AO353_00070 0.68 -0.1 15,190 - AO353_00070 0.68 +0.5 15,190 - AO353_00070 0.68 +0.9 15,190 - AO353_00070 0.68 +0.0 15,190 - AO353_00070 0.68 +1.1 15,190 - AO353_00070 0.68 +1.0 15,190 - AO353_00070 0.68 -0.7 15,190 - AO353_00070 0.68 +1.2 15,321 - AO353_00070 0.85 +1.2 15,321 - AO353_00070 0.85 -1.7 15,321 - AO353_00070 0.85 -0.1
Or see this region's nucleotide sequence