Experiment: D-Maltose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS21775 and ABZR86_RS21780 are separated by 199 nucleotides ABZR86_RS21780 and ABZR86_RS21785 are separated by 210 nucleotides ABZR86_RS21785 and ABZR86_RS21790 are separated by 15 nucleotides ABZR86_RS21790 and ABZR86_RS21795 are separated by 13 nucleotides
ABZR86_RS21775: ABZR86_RS21775 - disulfide bond formation protein B, at 330,132 to 330,635
_RS21775
ABZR86_RS21780: ABZR86_RS21780 - 50S ribosomal protein L17, at 330,835 to 331,218
_RS21780
ABZR86_RS21785: ABZR86_RS21785 - DNA-directed RNA polymerase subunit alpha, at 331,429 to 332,427
_RS21785
ABZR86_RS21790: ABZR86_RS21790 - 30S ribosomal protein S4, at 332,443 to 333,069
_RS21790
ABZR86_RS21795: ABZR86_RS21795 - 30S ribosomal protein S11, at 333,083 to 333,469
_RS21795
Position (kb) 331
332
333 Strain fitness (log2 ratio) -1
0
1 at 330.710 kb on - strand at 330.812 kb on + strand at 330.812 kb on + strand at 330.836 kb on + strand at 330.836 kb on + strand at 330.836 kb on + strand at 330.837 kb on - strand at 331.233 kb on - strand at 331.245 kb on - strand at 331.301 kb on - strand at 331.301 kb on - strand at 331.301 kb on - strand at 331.301 kb on - strand at 331.301 kb on - strand at 331.315 kb on - strand at 331.315 kb on - strand at 331.317 kb on - strand at 331.317 kb on - strand at 331.317 kb on - strand at 331.355 kb on - strand at 332.445 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Maltose (C) remove 330,710 - -0.7 330,812 + -0.0 330,812 + +0.9 330,836 + -0.0 330,836 + -0.3 330,836 + -0.5 330,837 - -1.3 331,233 - -0.4 331,245 - -0.7 331,301 - +0.1 331,301 - +0.4 331,301 - -0.7 331,301 - -0.0 331,301 - +0.3 331,315 - -1.2 331,315 - -0.0 331,317 - +0.0 331,317 - -1.4 331,317 - +0.1 331,355 - +0.6 332,445 - -0.8
Or see this region's nucleotide sequence