Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS21765

Experiment: D-Maltose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR86_RS21755 and ABZR86_RS21760 overlap by 4 nucleotidesABZR86_RS21760 and ABZR86_RS21765 are separated by 74 nucleotidesABZR86_RS21765 and ABZR86_RS21770 are separated by 68 nucleotides ABZR86_RS21755: ABZR86_RS21755 - cytochrome c, at 324,922 to 326,211 _RS21755 ABZR86_RS21760: ABZR86_RS21760 - c-type cytochrome, at 326,208 to 326,966 _RS21760 ABZR86_RS21765: ABZR86_RS21765 - amidase, at 327,041 to 328,666 _RS21765 ABZR86_RS21770: ABZR86_RS21770 - class II 3-deoxy-7-phosphoheptulonate synthase, at 328,735 to 330,108 _RS21770 Position (kb) 327 328 329Strain fitness (log2 ratio) -2 -1 0 1at 326.051 kb on + strand, within ABZR86_RS21755at 326.051 kb on + strand, within ABZR86_RS21755at 326.052 kb on - strand, within ABZR86_RS21755at 326.428 kb on + strand, within ABZR86_RS21760at 326.428 kb on + strand, within ABZR86_RS21760at 326.429 kb on - strand, within ABZR86_RS21760at 326.429 kb on - strand, within ABZR86_RS21760at 326.435 kb on - strand, within ABZR86_RS21760at 326.435 kb on - strand, within ABZR86_RS21760at 326.623 kb on + strand, within ABZR86_RS21760at 326.623 kb on + strand, within ABZR86_RS21760at 326.624 kb on - strand, within ABZR86_RS21760at 326.644 kb on + strand, within ABZR86_RS21760at 326.644 kb on + strand, within ABZR86_RS21760at 326.644 kb on + strand, within ABZR86_RS21760at 326.644 kb on + strand, within ABZR86_RS21760at 326.644 kb on + strand, within ABZR86_RS21760at 326.644 kb on + strand, within ABZR86_RS21760at 326.644 kb on + strand, within ABZR86_RS21760at 326.645 kb on - strand, within ABZR86_RS21760at 326.645 kb on - strand, within ABZR86_RS21760at 326.645 kb on - strand, within ABZR86_RS21760at 326.671 kb on + strand, within ABZR86_RS21760at 326.671 kb on + strand, within ABZR86_RS21760at 326.671 kb on + strand, within ABZR86_RS21760at 326.671 kb on + strand, within ABZR86_RS21760at 326.671 kb on + strand, within ABZR86_RS21760at 326.672 kb on - strand, within ABZR86_RS21760at 326.672 kb on - strand, within ABZR86_RS21760at 326.672 kb on - strand, within ABZR86_RS21760at 326.672 kb on - strand, within ABZR86_RS21760at 326.686 kb on + strand, within ABZR86_RS21760at 326.686 kb on + strand, within ABZR86_RS21760at 326.687 kb on - strand, within ABZR86_RS21760at 326.810 kb on + strand, within ABZR86_RS21760at 326.810 kb on + strand, within ABZR86_RS21760at 326.960 kb on + strandat 326.961 kb on - strandat 326.975 kb on + strandat 326.975 kb on + strandat 326.975 kb on + strandat 326.976 kb on - strandat 326.976 kb on - strandat 326.976 kb on - strandat 326.977 kb on + strandat 326.977 kb on + strandat 326.977 kb on + strandat 326.977 kb on + strandat 326.977 kb on + strandat 326.977 kb on + strandat 326.977 kb on + strandat 326.978 kb on - strandat 326.978 kb on - strandat 327.005 kb on - strandat 328.082 kb on + strand, within ABZR86_RS21765at 328.082 kb on + strand, within ABZR86_RS21765at 328.082 kb on + strand, within ABZR86_RS21765at 328.082 kb on + strand, within ABZR86_RS21765at 328.083 kb on - strand, within ABZR86_RS21765at 328.083 kb on - strand, within ABZR86_RS21765at 328.083 kb on - strand, within ABZR86_RS21765at 328.099 kb on + strand, within ABZR86_RS21765at 328.099 kb on + strand, within ABZR86_RS21765at 328.100 kb on - strand, within ABZR86_RS21765at 328.100 kb on - strand, within ABZR86_RS21765at 328.109 kb on + strand, within ABZR86_RS21765at 328.256 kb on + strand, within ABZR86_RS21765at 328.256 kb on + strand, within ABZR86_RS21765at 328.256 kb on + strand, within ABZR86_RS21765at 328.256 kb on + strand, within ABZR86_RS21765at 328.257 kb on - strand, within ABZR86_RS21765at 328.257 kb on - strand, within ABZR86_RS21765at 328.257 kb on - strand, within ABZR86_RS21765at 328.556 kb on + strandat 328.557 kb on - strandat 328.563 kb on - strandat 328.563 kb on - strandat 328.563 kb on - strandat 328.606 kb on + strandat 328.607 kb on - strandat 328.672 kb on - strandat 328.672 kb on - strandat 328.672 kb on - strandat 328.679 kb on - strandat 328.679 kb on - strandat 328.736 kb on + strandat 328.737 kb on - strandat 328.799 kb on + strandat 328.799 kb on + strandat 328.800 kb on - strandat 328.800 kb on - strandat 328.800 kb on - strandat 328.830 kb on - strandat 328.978 kb on - strand, within ABZR86_RS21770at 329.001 kb on - strand, within ABZR86_RS21770at 329.022 kb on + strand, within ABZR86_RS21770at 329.023 kb on - strand, within ABZR86_RS21770at 329.252 kb on + strand, within ABZR86_RS21770at 329.366 kb on + strand, within ABZR86_RS21770at 329.366 kb on + strand, within ABZR86_RS21770at 329.366 kb on + strand, within ABZR86_RS21770at 329.366 kb on + strand, within ABZR86_RS21770at 329.367 kb on - strand, within ABZR86_RS21770at 329.532 kb on - strand, within ABZR86_RS21770

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Maltose (C)
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326,051 + ABZR86_RS21755 0.88 -0.4
326,051 + ABZR86_RS21755 0.88 -0.6
326,052 - ABZR86_RS21755 0.88 -0.1
326,428 + ABZR86_RS21760 0.29 -1.3
326,428 + ABZR86_RS21760 0.29 -0.1
326,429 - ABZR86_RS21760 0.29 -0.9
326,429 - ABZR86_RS21760 0.29 -0.4
326,435 - ABZR86_RS21760 0.30 -0.0
326,435 - ABZR86_RS21760 0.30 +1.0
326,623 + ABZR86_RS21760 0.55 +0.9
326,623 + ABZR86_RS21760 0.55 -0.3
326,624 - ABZR86_RS21760 0.55 -0.3
326,644 + ABZR86_RS21760 0.57 +0.3
326,644 + ABZR86_RS21760 0.57 +0.4
326,644 + ABZR86_RS21760 0.57 -2.0
326,644 + ABZR86_RS21760 0.57 -0.3
326,644 + ABZR86_RS21760 0.57 +1.1
326,644 + ABZR86_RS21760 0.57 +0.1
326,644 + ABZR86_RS21760 0.57 +0.1
326,645 - ABZR86_RS21760 0.58 -0.5
326,645 - ABZR86_RS21760 0.58 -0.2
326,645 - ABZR86_RS21760 0.58 -0.6
326,671 + ABZR86_RS21760 0.61 -0.6
326,671 + ABZR86_RS21760 0.61 -0.0
326,671 + ABZR86_RS21760 0.61 -0.4
326,671 + ABZR86_RS21760 0.61 -0.4
326,671 + ABZR86_RS21760 0.61 -1.0
326,672 - ABZR86_RS21760 0.61 -0.1
326,672 - ABZR86_RS21760 0.61 -1.7
326,672 - ABZR86_RS21760 0.61 -2.1
326,672 - ABZR86_RS21760 0.61 -0.8
326,686 + ABZR86_RS21760 0.63 -0.0
326,686 + ABZR86_RS21760 0.63 +0.3
326,687 - ABZR86_RS21760 0.63 -0.2
326,810 + ABZR86_RS21760 0.79 -1.0
326,810 + ABZR86_RS21760 0.79 -0.0
326,960 + -0.1
326,961 - -0.1
326,975 + -1.1
326,975 + +0.5
326,975 + -0.0
326,976 - +0.2
326,976 - -0.5
326,976 - +1.1
326,977 + +0.3
326,977 + +0.1
326,977 + +0.4
326,977 + -0.4
326,977 + +1.0
326,977 + -0.1
326,977 + +0.5
326,978 - +0.2
326,978 - -0.2
327,005 - +0.4
328,082 + ABZR86_RS21765 0.64 -0.6
328,082 + ABZR86_RS21765 0.64 -0.3
328,082 + ABZR86_RS21765 0.64 +0.7
328,082 + ABZR86_RS21765 0.64 +0.3
328,083 - ABZR86_RS21765 0.64 +1.1
328,083 - ABZR86_RS21765 0.64 +1.7
328,083 - ABZR86_RS21765 0.64 -1.0
328,099 + ABZR86_RS21765 0.65 -0.3
328,099 + ABZR86_RS21765 0.65 -1.4
328,100 - ABZR86_RS21765 0.65 -0.6
328,100 - ABZR86_RS21765 0.65 +0.4
328,109 + ABZR86_RS21765 0.66 +0.4
328,256 + ABZR86_RS21765 0.75 +0.4
328,256 + ABZR86_RS21765 0.75 -0.0
328,256 + ABZR86_RS21765 0.75 -1.3
328,256 + ABZR86_RS21765 0.75 +0.2
328,257 - ABZR86_RS21765 0.75 +0.1
328,257 - ABZR86_RS21765 0.75 +0.4
328,257 - ABZR86_RS21765 0.75 +1.0
328,556 + -1.2
328,557 - +0.4
328,563 - -0.5
328,563 - +0.3
328,563 - +0.1
328,606 + -0.5
328,607 - -0.1
328,672 - -0.4
328,672 - -0.2
328,672 - -0.4
328,679 - +0.5
328,679 - -0.0
328,736 + -0.0
328,737 - -0.4
328,799 + +0.1
328,799 + -1.1
328,800 - +0.2
328,800 - +0.1
328,800 - +0.4
328,830 - +0.5
328,978 - ABZR86_RS21770 0.18 -1.3
329,001 - ABZR86_RS21770 0.19 +0.4
329,022 + ABZR86_RS21770 0.21 +1.0
329,023 - ABZR86_RS21770 0.21 +0.4
329,252 + ABZR86_RS21770 0.38 -0.7
329,366 + ABZR86_RS21770 0.46 +0.4
329,366 + ABZR86_RS21770 0.46 -0.2
329,366 + ABZR86_RS21770 0.46 +0.3
329,366 + ABZR86_RS21770 0.46 -0.8
329,367 - ABZR86_RS21770 0.46 -0.4
329,532 - ABZR86_RS21770 0.58 +0.4

Or see this region's nucleotide sequence