Experiment: D-Maltose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS20570 and ABZR86_RS20575 are separated by 144 nucleotides ABZR86_RS20575 and ABZR86_RS20580 are separated by 154 nucleotides ABZR86_RS20580 and ABZR86_RS20585 are separated by 43 nucleotides
ABZR86_RS20570: ABZR86_RS20570 - acetyl-CoA C-acyltransferase, at 62,600 to 63,784
_RS20570
ABZR86_RS20575: ABZR86_RS20575 - hypothetical protein, at 63,929 to 64,291
_RS20575
ABZR86_RS20580: ABZR86_RS20580 - carboxyl transferase domain-containing protein, at 64,446 to 66,053
_RS20580
ABZR86_RS20585: ABZR86_RS20585 - molecular chaperone HscC, at 66,097 to 67,788
_RS20585
Position (kb) 64
65
66
67 Strain fitness (log2 ratio) -2
-1
0
1
2 at 63.846 kb on + strand at 63.847 kb on - strand at 63.881 kb on + strand at 63.881 kb on + strand at 63.884 kb on + strand at 63.884 kb on + strand at 63.884 kb on + strand at 63.884 kb on + strand at 63.884 kb on + strand at 63.888 kb on - strand at 63.888 kb on - strand at 63.888 kb on - strand at 63.948 kb on + strand at 63.949 kb on - strand at 63.949 kb on - strand at 64.290 kb on - strand at 64.689 kb on + strand, within ABZR86_RS20580 at 64.689 kb on + strand, within ABZR86_RS20580 at 64.690 kb on - strand, within ABZR86_RS20580 at 64.690 kb on - strand, within ABZR86_RS20580 at 64.690 kb on - strand, within ABZR86_RS20580 at 64.795 kb on - strand, within ABZR86_RS20580 at 64.795 kb on - strand, within ABZR86_RS20580 at 64.795 kb on - strand, within ABZR86_RS20580 at 64.866 kb on + strand, within ABZR86_RS20580 at 64.866 kb on + strand, within ABZR86_RS20580 at 64.866 kb on + strand, within ABZR86_RS20580 at 64.947 kb on + strand, within ABZR86_RS20580 at 64.947 kb on + strand, within ABZR86_RS20580 at 64.947 kb on + strand, within ABZR86_RS20580 at 64.948 kb on - strand, within ABZR86_RS20580 at 64.948 kb on - strand, within ABZR86_RS20580 at 65.025 kb on + strand, within ABZR86_RS20580 at 65.025 kb on + strand, within ABZR86_RS20580 at 65.025 kb on + strand, within ABZR86_RS20580 at 65.026 kb on - strand, within ABZR86_RS20580 at 65.076 kb on - strand, within ABZR86_RS20580 at 65.076 kb on - strand, within ABZR86_RS20580 at 65.159 kb on + strand, within ABZR86_RS20580 at 65.159 kb on + strand, within ABZR86_RS20580 at 65.159 kb on + strand, within ABZR86_RS20580 at 65.159 kb on + strand, within ABZR86_RS20580 at 65.160 kb on - strand, within ABZR86_RS20580 at 65.160 kb on - strand, within ABZR86_RS20580 at 65.295 kb on + strand, within ABZR86_RS20580 at 65.296 kb on - strand, within ABZR86_RS20580 at 65.599 kb on - strand, within ABZR86_RS20580 at 65.709 kb on + strand, within ABZR86_RS20580 at 65.709 kb on + strand, within ABZR86_RS20580 at 65.710 kb on - strand, within ABZR86_RS20580 at 65.899 kb on - strand at 65.899 kb on - strand at 65.919 kb on + strand at 65.920 kb on - strand at 65.920 kb on - strand at 65.920 kb on - strand at 66.051 kb on + strand at 66.051 kb on + strand at 66.051 kb on + strand at 66.051 kb on + strand at 66.052 kb on - strand at 66.104 kb on + strand at 66.104 kb on + strand at 66.105 kb on - strand at 66.105 kb on - strand at 66.105 kb on - strand at 66.105 kb on - strand at 66.109 kb on - strand at 66.146 kb on - strand at 66.451 kb on + strand, within ABZR86_RS20585 at 66.452 kb on - strand, within ABZR86_RS20585 at 66.717 kb on - strand, within ABZR86_RS20585
Per-strain Table
Position Strand Gene LocusTag Fraction D-Maltose (C) remove 63,846 + -1.9 63,847 - +0.3 63,881 + +0.4 63,881 + +1.8 63,884 + -0.4 63,884 + +0.8 63,884 + +1.2 63,884 + +0.6 63,884 + +1.0 63,888 - +0.0 63,888 - -0.0 63,888 - -0.3 63,948 + +0.1 63,949 - -0.3 63,949 - -0.1 64,290 - -0.2 64,689 + ABZR86_RS20580 0.15 -0.7 64,689 + ABZR86_RS20580 0.15 -1.6 64,690 - ABZR86_RS20580 0.15 +0.2 64,690 - ABZR86_RS20580 0.15 +2.0 64,690 - ABZR86_RS20580 0.15 -0.4 64,795 - ABZR86_RS20580 0.22 +0.2 64,795 - ABZR86_RS20580 0.22 +1.2 64,795 - ABZR86_RS20580 0.22 -0.3 64,866 + ABZR86_RS20580 0.26 +0.5 64,866 + ABZR86_RS20580 0.26 -0.4 64,866 + ABZR86_RS20580 0.26 -0.3 64,947 + ABZR86_RS20580 0.31 +0.0 64,947 + ABZR86_RS20580 0.31 -2.2 64,947 + ABZR86_RS20580 0.31 +0.4 64,948 - ABZR86_RS20580 0.31 -0.6 64,948 - ABZR86_RS20580 0.31 -0.2 65,025 + ABZR86_RS20580 0.36 -0.4 65,025 + ABZR86_RS20580 0.36 -0.1 65,025 + ABZR86_RS20580 0.36 -0.7 65,026 - ABZR86_RS20580 0.36 +0.5 65,076 - ABZR86_RS20580 0.39 +0.4 65,076 - ABZR86_RS20580 0.39 -0.5 65,159 + ABZR86_RS20580 0.44 +1.4 65,159 + ABZR86_RS20580 0.44 +2.2 65,159 + ABZR86_RS20580 0.44 -0.6 65,159 + ABZR86_RS20580 0.44 -0.1 65,160 - ABZR86_RS20580 0.44 +0.0 65,160 - ABZR86_RS20580 0.44 -0.5 65,295 + ABZR86_RS20580 0.53 -0.3 65,296 - ABZR86_RS20580 0.53 -0.2 65,599 - ABZR86_RS20580 0.72 +0.7 65,709 + ABZR86_RS20580 0.79 -0.3 65,709 + ABZR86_RS20580 0.79 -0.2 65,710 - ABZR86_RS20580 0.79 +0.5 65,899 - -0.2 65,899 - +0.3 65,919 + -0.1 65,920 - -0.6 65,920 - -1.4 65,920 - -0.0 66,051 + -0.6 66,051 + -1.0 66,051 + +0.3 66,051 + -0.3 66,052 - +0.1 66,104 + +2.0 66,104 + -0.1 66,105 - -0.6 66,105 - +0.6 66,105 - +1.0 66,105 - -1.5 66,109 - +0.3 66,146 - +0.5 66,451 + ABZR86_RS20585 0.21 -0.9 66,452 - ABZR86_RS20585 0.21 +0.2 66,717 - ABZR86_RS20585 0.37 +0.3
Or see this region's nucleotide sequence