Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS15580

Experiment: D-Maltose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR86_RS15575 and ABZR86_RS15580 are separated by 284 nucleotidesABZR86_RS15580 and ABZR86_RS15585 are separated by 235 nucleotides ABZR86_RS15575: ABZR86_RS15575 - polyamine aminopropyltransferase, at 3,504,581 to 3,505,432 _RS15575 ABZR86_RS15580: ABZR86_RS15580 - biosynthetic arginine decarboxylase, at 3,505,717 to 3,507,606 _RS15580 ABZR86_RS15585: ABZR86_RS15585 - 3-hydroxybutyrate dehydrogenase, at 3,507,842 to 3,508,630 _RS15585 Position (kb) 3505 3506 3507 3508Strain fitness (log2 ratio) -2 -1 0 1 2at 3505.482 kb on + strandat 3505.482 kb on + strandat 3505.483 kb on - strandat 3505.483 kb on - strandat 3505.540 kb on + strandat 3505.540 kb on + strandat 3505.540 kb on + strandat 3505.540 kb on + strandat 3505.540 kb on + strandat 3505.540 kb on + strandat 3505.540 kb on + strandat 3505.540 kb on + strandat 3505.540 kb on + strandat 3505.540 kb on + strandat 3505.540 kb on + strandat 3505.540 kb on + strandat 3505.541 kb on - strandat 3505.541 kb on - strandat 3505.541 kb on - strandat 3505.541 kb on - strandat 3505.541 kb on - strandat 3505.541 kb on - strandat 3505.545 kb on + strandat 3505.545 kb on + strandat 3505.545 kb on + strandat 3505.545 kb on + strandat 3505.546 kb on - strandat 3505.546 kb on - strandat 3505.546 kb on - strandat 3505.546 kb on - strandat 3505.584 kb on + strandat 3505.584 kb on + strandat 3505.584 kb on + strandat 3505.584 kb on + strandat 3505.584 kb on + strandat 3505.584 kb on + strandat 3505.585 kb on - strandat 3505.585 kb on - strandat 3505.585 kb on - strandat 3505.585 kb on - strandat 3505.585 kb on - strandat 3505.585 kb on - strandat 3507.655 kb on + strandat 3507.710 kb on - strandat 3507.841 kb on + strandat 3507.841 kb on + strandat 3507.920 kb on + strandat 3507.920 kb on + strandat 3507.921 kb on - strand, within ABZR86_RS15585at 3508.232 kb on + strand, within ABZR86_RS15585at 3508.232 kb on + strand, within ABZR86_RS15585at 3508.232 kb on + strand, within ABZR86_RS15585at 3508.232 kb on + strand, within ABZR86_RS15585at 3508.232 kb on + strand, within ABZR86_RS15585at 3508.232 kb on + strand, within ABZR86_RS15585at 3508.232 kb on + strand, within ABZR86_RS15585at 3508.232 kb on + strand, within ABZR86_RS15585at 3508.232 kb on + strand, within ABZR86_RS15585at 3508.232 kb on + strand, within ABZR86_RS15585at 3508.232 kb on + strand, within ABZR86_RS15585at 3508.232 kb on + strand, within ABZR86_RS15585at 3508.232 kb on + strand, within ABZR86_RS15585at 3508.232 kb on + strand, within ABZR86_RS15585at 3508.232 kb on + strand, within ABZR86_RS15585at 3508.232 kb on + strand, within ABZR86_RS15585at 3508.232 kb on + strand, within ABZR86_RS15585at 3508.232 kb on + strand, within ABZR86_RS15585at 3508.232 kb on + strand, within ABZR86_RS15585at 3508.232 kb on + strand, within ABZR86_RS15585at 3508.232 kb on + strand, within ABZR86_RS15585at 3508.233 kb on - strand, within ABZR86_RS15585at 3508.233 kb on - strand, within ABZR86_RS15585at 3508.233 kb on - strand, within ABZR86_RS15585at 3508.233 kb on - strand, within ABZR86_RS15585at 3508.233 kb on - strand, within ABZR86_RS15585at 3508.233 kb on - strand, within ABZR86_RS15585at 3508.233 kb on - strand, within ABZR86_RS15585at 3508.233 kb on - strand, within ABZR86_RS15585at 3508.233 kb on - strand, within ABZR86_RS15585at 3508.233 kb on - strand, within ABZR86_RS15585at 3508.233 kb on - strand, within ABZR86_RS15585at 3508.233 kb on - strand, within ABZR86_RS15585at 3508.233 kb on - strand, within ABZR86_RS15585at 3508.233 kb on - strand, within ABZR86_RS15585at 3508.233 kb on - strand, within ABZR86_RS15585at 3508.233 kb on - strand, within ABZR86_RS15585at 3508.233 kb on - strand, within ABZR86_RS15585at 3508.233 kb on - strand, within ABZR86_RS15585at 3508.233 kb on - strand, within ABZR86_RS15585at 3508.233 kb on - strand, within ABZR86_RS15585at 3508.233 kb on - strand, within ABZR86_RS15585at 3508.233 kb on - strand, within ABZR86_RS15585at 3508.233 kb on - strand, within ABZR86_RS15585at 3508.233 kb on - strand, within ABZR86_RS15585at 3508.233 kb on - strand, within ABZR86_RS15585at 3508.233 kb on - strand, within ABZR86_RS15585at 3508.233 kb on - strand, within ABZR86_RS15585at 3508.262 kb on + strand, within ABZR86_RS15585at 3508.262 kb on + strand, within ABZR86_RS15585at 3508.262 kb on + strand, within ABZR86_RS15585at 3508.262 kb on + strand, within ABZR86_RS15585at 3508.262 kb on + strand, within ABZR86_RS15585at 3508.262 kb on + strand, within ABZR86_RS15585at 3508.262 kb on + strand, within ABZR86_RS15585at 3508.262 kb on + strand, within ABZR86_RS15585at 3508.262 kb on + strand, within ABZR86_RS15585at 3508.262 kb on + strand, within ABZR86_RS15585at 3508.263 kb on - strand, within ABZR86_RS15585at 3508.263 kb on - strand, within ABZR86_RS15585at 3508.263 kb on - strand, within ABZR86_RS15585at 3508.263 kb on - strand, within ABZR86_RS15585at 3508.263 kb on - strand, within ABZR86_RS15585at 3508.263 kb on - strand, within ABZR86_RS15585at 3508.263 kb on - strand, within ABZR86_RS15585at 3508.263 kb on - strand, within ABZR86_RS15585at 3508.263 kb on - strand, within ABZR86_RS15585at 3508.263 kb on - strand, within ABZR86_RS15585at 3508.310 kb on + strand, within ABZR86_RS15585at 3508.310 kb on + strand, within ABZR86_RS15585at 3508.310 kb on + strand, within ABZR86_RS15585at 3508.311 kb on - strand, within ABZR86_RS15585at 3508.311 kb on - strand, within ABZR86_RS15585at 3508.315 kb on + strand, within ABZR86_RS15585

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Maltose (C)
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3,505,482 + +0.7
3,505,482 + -0.4
3,505,483 - +0.7
3,505,483 - +2.4
3,505,540 + +0.3
3,505,540 + -0.3
3,505,540 + +0.2
3,505,540 + -0.2
3,505,540 + -1.0
3,505,540 + +0.4
3,505,540 + +1.2
3,505,540 + +1.2
3,505,540 + -0.3
3,505,540 + +0.0
3,505,540 + +0.2
3,505,540 + +0.3
3,505,541 - +0.3
3,505,541 - +1.1
3,505,541 - +0.9
3,505,541 - +0.8
3,505,541 - +0.7
3,505,541 - +1.1
3,505,545 + +0.1
3,505,545 + +0.7
3,505,545 + -0.4
3,505,545 + -0.5
3,505,546 - +0.9
3,505,546 - +0.9
3,505,546 - +1.4
3,505,546 - +2.6
3,505,584 + -0.2
3,505,584 + -0.8
3,505,584 + -0.1
3,505,584 + +0.4
3,505,584 + -0.8
3,505,584 + +0.4
3,505,585 - -1.2
3,505,585 - +2.1
3,505,585 - -0.7
3,505,585 - +0.3
3,505,585 - +0.8
3,505,585 - +0.0
3,507,655 + -0.9
3,507,710 - +0.3
3,507,841 + -0.9
3,507,841 + -0.4
3,507,920 + +0.3
3,507,920 + -0.2
3,507,921 - ABZR86_RS15585 0.10 +0.8
3,508,232 + ABZR86_RS15585 0.49 +0.6
3,508,232 + ABZR86_RS15585 0.49 -0.1
3,508,232 + ABZR86_RS15585 0.49 -2.0
3,508,232 + ABZR86_RS15585 0.49 +0.8
3,508,232 + ABZR86_RS15585 0.49 +0.0
3,508,232 + ABZR86_RS15585 0.49 -0.4
3,508,232 + ABZR86_RS15585 0.49 +0.7
3,508,232 + ABZR86_RS15585 0.49 -0.6
3,508,232 + ABZR86_RS15585 0.49 -0.6
3,508,232 + ABZR86_RS15585 0.49 -1.9
3,508,232 + ABZR86_RS15585 0.49 -0.1
3,508,232 + ABZR86_RS15585 0.49 -1.1
3,508,232 + ABZR86_RS15585 0.49 +0.1
3,508,232 + ABZR86_RS15585 0.49 +0.1
3,508,232 + ABZR86_RS15585 0.49 +0.3
3,508,232 + ABZR86_RS15585 0.49 +0.8
3,508,232 + ABZR86_RS15585 0.49 -0.4
3,508,232 + ABZR86_RS15585 0.49 +0.9
3,508,232 + ABZR86_RS15585 0.49 -0.7
3,508,232 + ABZR86_RS15585 0.49 +0.9
3,508,232 + ABZR86_RS15585 0.49 -0.1
3,508,233 - ABZR86_RS15585 0.50 +0.9
3,508,233 - ABZR86_RS15585 0.50 +0.6
3,508,233 - ABZR86_RS15585 0.50 -1.7
3,508,233 - ABZR86_RS15585 0.50 +0.4
3,508,233 - ABZR86_RS15585 0.50 -0.4
3,508,233 - ABZR86_RS15585 0.50 -0.2
3,508,233 - ABZR86_RS15585 0.50 +0.6
3,508,233 - ABZR86_RS15585 0.50 +0.1
3,508,233 - ABZR86_RS15585 0.50 -0.4
3,508,233 - ABZR86_RS15585 0.50 +0.1
3,508,233 - ABZR86_RS15585 0.50 +1.0
3,508,233 - ABZR86_RS15585 0.50 +0.4
3,508,233 - ABZR86_RS15585 0.50 +0.5
3,508,233 - ABZR86_RS15585 0.50 +1.1
3,508,233 - ABZR86_RS15585 0.50 +1.0
3,508,233 - ABZR86_RS15585 0.50 +1.0
3,508,233 - ABZR86_RS15585 0.50 +0.0
3,508,233 - ABZR86_RS15585 0.50 -0.4
3,508,233 - ABZR86_RS15585 0.50 +0.2
3,508,233 - ABZR86_RS15585 0.50 +0.4
3,508,233 - ABZR86_RS15585 0.50 +0.6
3,508,233 - ABZR86_RS15585 0.50 +0.3
3,508,233 - ABZR86_RS15585 0.50 -1.9
3,508,233 - ABZR86_RS15585 0.50 +0.5
3,508,233 - ABZR86_RS15585 0.50 +0.2
3,508,233 - ABZR86_RS15585 0.50 +0.1
3,508,233 - ABZR86_RS15585 0.50 -0.4
3,508,262 + ABZR86_RS15585 0.53 +0.0
3,508,262 + ABZR86_RS15585 0.53 +0.5
3,508,262 + ABZR86_RS15585 0.53 +0.6
3,508,262 + ABZR86_RS15585 0.53 +0.1
3,508,262 + ABZR86_RS15585 0.53 -0.0
3,508,262 + ABZR86_RS15585 0.53 -0.5
3,508,262 + ABZR86_RS15585 0.53 +0.5
3,508,262 + ABZR86_RS15585 0.53 +1.1
3,508,262 + ABZR86_RS15585 0.53 -0.6
3,508,262 + ABZR86_RS15585 0.53 -0.5
3,508,263 - ABZR86_RS15585 0.53 -0.5
3,508,263 - ABZR86_RS15585 0.53 +0.5
3,508,263 - ABZR86_RS15585 0.53 -0.5
3,508,263 - ABZR86_RS15585 0.53 -0.0
3,508,263 - ABZR86_RS15585 0.53 +0.1
3,508,263 - ABZR86_RS15585 0.53 +0.5
3,508,263 - ABZR86_RS15585 0.53 -0.1
3,508,263 - ABZR86_RS15585 0.53 -0.2
3,508,263 - ABZR86_RS15585 0.53 -0.4
3,508,263 - ABZR86_RS15585 0.53 +1.1
3,508,310 + ABZR86_RS15585 0.59 +0.1
3,508,310 + ABZR86_RS15585 0.59 +0.2
3,508,310 + ABZR86_RS15585 0.59 +0.1
3,508,311 - ABZR86_RS15585 0.59 -0.4
3,508,311 - ABZR86_RS15585 0.59 +0.1
3,508,315 + ABZR86_RS15585 0.60 +0.4

Or see this region's nucleotide sequence