Experiment: D-Maltose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS14590 and ABZR86_RS14595 overlap by 4 nucleotides ABZR86_RS14595 and ABZR86_RS14600 are separated by 76 nucleotides ABZR86_RS14600 and ABZR86_RS14605 are separated by 1 nucleotides
ABZR86_RS14590: ABZR86_RS14590 - autotransporter outer membrane beta-barrel domain-containing protein, at 3,265,164 to 3,266,177
_RS14590
ABZR86_RS14595: ABZR86_RS14595 - hypothetical protein, at 3,266,174 to 3,266,641
_RS14595
ABZR86_RS14600: ABZR86_RS14600 - conjugative transfer signal peptidase TraF, at 3,266,718 to 3,267,305
_RS14600
ABZR86_RS14605: ABZR86_RS14605 - fimbrial protein, at 3,267,307 to 3,268,296
_RS14605
Position (kb)
3266
3267 Strain fitness (log2 ratio)
-1
0
1 at 3265.249 kb on + strand at 3265.249 kb on + strand at 3265.402 kb on + strand, within ABZR86_RS14590 at 3265.402 kb on + strand, within ABZR86_RS14590 at 3265.402 kb on + strand, within ABZR86_RS14590 at 3265.403 kb on - strand, within ABZR86_RS14590 at 3265.403 kb on - strand, within ABZR86_RS14590 at 3265.469 kb on + strand, within ABZR86_RS14590 at 3265.503 kb on - strand, within ABZR86_RS14590 at 3265.503 kb on - strand, within ABZR86_RS14590 at 3265.517 kb on - strand, within ABZR86_RS14590 at 3265.653 kb on + strand, within ABZR86_RS14590 at 3265.670 kb on - strand, within ABZR86_RS14590 at 3265.697 kb on - strand, within ABZR86_RS14590 at 3265.697 kb on - strand, within ABZR86_RS14590 at 3265.816 kb on + strand, within ABZR86_RS14590 at 3266.094 kb on + strand at 3266.094 kb on + strand at 3266.524 kb on + strand, within ABZR86_RS14595 at 3266.524 kb on + strand, within ABZR86_RS14595 at 3266.524 kb on + strand, within ABZR86_RS14595 at 3266.616 kb on - strand at 3266.661 kb on + strand at 3266.662 kb on - strand at 3266.804 kb on - strand, within ABZR86_RS14600 at 3266.848 kb on - strand, within ABZR86_RS14600 at 3266.848 kb on - strand, within ABZR86_RS14600 at 3267.115 kb on + strand, within ABZR86_RS14600 at 3267.115 kb on + strand, within ABZR86_RS14600 at 3267.116 kb on - strand, within ABZR86_RS14600 at 3267.116 kb on - strand, within ABZR86_RS14600 at 3267.116 kb on - strand, within ABZR86_RS14600 at 3267.116 kb on - strand, within ABZR86_RS14600 at 3267.178 kb on + strand, within ABZR86_RS14600 at 3267.178 kb on + strand, within ABZR86_RS14600 at 3267.179 kb on - strand, within ABZR86_RS14600 at 3267.398 kb on + strand at 3267.411 kb on + strand, within ABZR86_RS14605 at 3267.411 kb on + strand, within ABZR86_RS14605 at 3267.415 kb on + strand, within ABZR86_RS14605 at 3267.416 kb on - strand, within ABZR86_RS14605 at 3267.416 kb on - strand, within ABZR86_RS14605 at 3267.513 kb on + strand, within ABZR86_RS14605 at 3267.513 kb on + strand, within ABZR86_RS14605 at 3267.513 kb on + strand, within ABZR86_RS14605 at 3267.514 kb on - strand, within ABZR86_RS14605 at 3267.515 kb on + strand, within ABZR86_RS14605 at 3267.515 kb on + strand, within ABZR86_RS14605 at 3267.516 kb on - strand, within ABZR86_RS14605 at 3267.516 kb on - strand, within ABZR86_RS14605 at 3267.516 kb on - strand, within ABZR86_RS14605 at 3267.516 kb on - strand, within ABZR86_RS14605
Per-strain Table
Position Strand Gene LocusTag Fraction D-Maltose (C) remove 3,265,249 + -0.4 3,265,249 + -0.1 3,265,402 + ABZR86_RS14590 0.23 -0.5 3,265,402 + ABZR86_RS14590 0.23 +0.1 3,265,402 + ABZR86_RS14590 0.23 +0.6 3,265,403 - ABZR86_RS14590 0.24 -0.3 3,265,403 - ABZR86_RS14590 0.24 +0.2 3,265,469 + ABZR86_RS14590 0.30 -0.1 3,265,503 - ABZR86_RS14590 0.33 -0.1 3,265,503 - ABZR86_RS14590 0.33 +0.3 3,265,517 - ABZR86_RS14590 0.35 +0.7 3,265,653 + ABZR86_RS14590 0.48 -0.0 3,265,670 - ABZR86_RS14590 0.50 +0.1 3,265,697 - ABZR86_RS14590 0.53 +0.1 3,265,697 - ABZR86_RS14590 0.53 -0.5 3,265,816 + ABZR86_RS14590 0.64 +0.2 3,266,094 + -0.3 3,266,094 + -0.3 3,266,524 + ABZR86_RS14595 0.75 +0.8 3,266,524 + ABZR86_RS14595 0.75 +0.6 3,266,524 + ABZR86_RS14595 0.75 +0.5 3,266,616 - +0.3 3,266,661 + -0.2 3,266,662 - +0.1 3,266,804 - ABZR86_RS14600 0.15 -0.1 3,266,848 - ABZR86_RS14600 0.22 +0.8 3,266,848 - ABZR86_RS14600 0.22 +0.0 3,267,115 + ABZR86_RS14600 0.68 -0.1 3,267,115 + ABZR86_RS14600 0.68 +0.5 3,267,116 - ABZR86_RS14600 0.68 +0.7 3,267,116 - ABZR86_RS14600 0.68 +0.4 3,267,116 - ABZR86_RS14600 0.68 -0.2 3,267,116 - ABZR86_RS14600 0.68 +0.2 3,267,178 + ABZR86_RS14600 0.78 -0.2 3,267,178 + ABZR86_RS14600 0.78 +1.2 3,267,179 - ABZR86_RS14600 0.78 +0.3 3,267,398 + +0.7 3,267,411 + ABZR86_RS14605 0.11 -0.2 3,267,411 + ABZR86_RS14605 0.11 -0.0 3,267,415 + ABZR86_RS14605 0.11 -0.8 3,267,416 - ABZR86_RS14605 0.11 +0.0 3,267,416 - ABZR86_RS14605 0.11 +0.5 3,267,513 + ABZR86_RS14605 0.21 +0.1 3,267,513 + ABZR86_RS14605 0.21 -1.3 3,267,513 + ABZR86_RS14605 0.21 +0.3 3,267,514 - ABZR86_RS14605 0.21 +1.0 3,267,515 + ABZR86_RS14605 0.21 +1.0 3,267,515 + ABZR86_RS14605 0.21 -0.1 3,267,516 - ABZR86_RS14605 0.21 +0.9 3,267,516 - ABZR86_RS14605 0.21 +0.2 3,267,516 - ABZR86_RS14605 0.21 +0.2 3,267,516 - ABZR86_RS14605 0.21 +0.5
Or see this region's nucleotide sequence