Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS12985

Experiment: D-Maltose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR86_RS12980 and ABZR86_RS12985 are separated by 259 nucleotidesABZR86_RS12985 and ABZR86_RS12990 are separated by 304 nucleotidesABZR86_RS12990 and ABZR86_RS12995 are separated by 67 nucleotides ABZR86_RS12980: ABZR86_RS12980 - coniferyl aldehyde dehydrogenase, at 2,912,156 to 2,913,568 _RS12980 ABZR86_RS12985: ABZR86_RS12985 - outer membrane protein transport protein, at 2,913,828 to 2,915,267 _RS12985 ABZR86_RS12990: ABZR86_RS12990 - YcgL domain-containing protein, at 2,915,572 to 2,915,859 _RS12990 ABZR86_RS12995: ABZR86_RS12995 - ankyrin repeat domain-containing protein, at 2,915,927 to 2,919,391 _RS12995 Position (kb) 2913 2914 2915 2916Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2912.915 kb on + strand, within ABZR86_RS12980at 2912.915 kb on + strand, within ABZR86_RS12980at 2912.915 kb on + strand, within ABZR86_RS12980at 2912.915 kb on + strand, within ABZR86_RS12980at 2912.915 kb on + strand, within ABZR86_RS12980at 2912.915 kb on + strand, within ABZR86_RS12980at 2912.915 kb on + strand, within ABZR86_RS12980at 2912.915 kb on + strand, within ABZR86_RS12980at 2912.916 kb on - strand, within ABZR86_RS12980at 2912.916 kb on - strand, within ABZR86_RS12980at 2912.916 kb on - strand, within ABZR86_RS12980at 2913.011 kb on + strand, within ABZR86_RS12980at 2913.012 kb on - strand, within ABZR86_RS12980at 2913.248 kb on + strand, within ABZR86_RS12980at 2913.249 kb on - strand, within ABZR86_RS12980at 2913.281 kb on + strand, within ABZR86_RS12980at 2913.282 kb on - strand, within ABZR86_RS12980at 2913.282 kb on - strand, within ABZR86_RS12980at 2913.332 kb on - strand, within ABZR86_RS12980at 2913.332 kb on - strand, within ABZR86_RS12980at 2913.365 kb on + strand, within ABZR86_RS12980at 2913.366 kb on - strand, within ABZR86_RS12980at 2913.366 kb on - strand, within ABZR86_RS12980at 2913.425 kb on + strand, within ABZR86_RS12980at 2913.518 kb on + strandat 2913.594 kb on - strandat 2913.594 kb on - strandat 2913.691 kb on - strandat 2913.753 kb on - strandat 2913.820 kb on + strandat 2913.821 kb on - strandat 2913.829 kb on + strandat 2913.830 kb on - strandat 2913.830 kb on - strandat 2913.838 kb on + strandat 2913.839 kb on - strandat 2913.839 kb on - strandat 2913.868 kb on + strandat 2913.869 kb on - strandat 2913.923 kb on + strandat 2913.923 kb on + strandat 2913.923 kb on + strandat 2913.924 kb on - strandat 2913.924 kb on - strandat 2913.944 kb on + strandat 2913.944 kb on + strandat 2913.944 kb on + strandat 2913.944 kb on + strandat 2913.944 kb on + strandat 2913.944 kb on + strandat 2913.944 kb on + strandat 2913.944 kb on + strandat 2913.944 kb on + strandat 2913.944 kb on + strandat 2913.945 kb on - strandat 2913.945 kb on - strandat 2913.945 kb on - strandat 2913.945 kb on - strandat 2913.945 kb on - strandat 2913.953 kb on - strandat 2913.953 kb on - strandat 2913.953 kb on - strandat 2913.988 kb on + strand, within ABZR86_RS12985at 2913.988 kb on + strand, within ABZR86_RS12985at 2913.988 kb on + strand, within ABZR86_RS12985at 2913.989 kb on - strand, within ABZR86_RS12985at 2913.989 kb on - strand, within ABZR86_RS12985at 2913.989 kb on - strand, within ABZR86_RS12985at 2913.989 kb on - strand, within ABZR86_RS12985at 2914.111 kb on + strand, within ABZR86_RS12985at 2914.111 kb on + strand, within ABZR86_RS12985at 2914.111 kb on + strand, within ABZR86_RS12985at 2914.111 kb on + strand, within ABZR86_RS12985at 2914.111 kb on + strand, within ABZR86_RS12985at 2914.111 kb on + strand, within ABZR86_RS12985at 2914.112 kb on - strand, within ABZR86_RS12985at 2914.112 kb on - strand, within ABZR86_RS12985at 2914.112 kb on - strand, within ABZR86_RS12985at 2914.112 kb on - strand, within ABZR86_RS12985at 2914.114 kb on + strand, within ABZR86_RS12985at 2914.115 kb on - strand, within ABZR86_RS12985at 2914.135 kb on + strand, within ABZR86_RS12985at 2914.136 kb on - strand, within ABZR86_RS12985at 2914.136 kb on - strand, within ABZR86_RS12985at 2914.157 kb on - strand, within ABZR86_RS12985at 2914.192 kb on + strand, within ABZR86_RS12985at 2914.193 kb on - strand, within ABZR86_RS12985at 2914.496 kb on - strand, within ABZR86_RS12985at 2914.517 kb on - strand, within ABZR86_RS12985at 2914.733 kb on + strand, within ABZR86_RS12985at 2914.733 kb on + strand, within ABZR86_RS12985at 2914.733 kb on + strand, within ABZR86_RS12985at 2914.734 kb on - strand, within ABZR86_RS12985at 2914.825 kb on + strand, within ABZR86_RS12985at 2914.868 kb on + strand, within ABZR86_RS12985at 2915.032 kb on + strand, within ABZR86_RS12985at 2915.033 kb on - strand, within ABZR86_RS12985at 2915.033 kb on - strand, within ABZR86_RS12985at 2915.033 kb on - strand, within ABZR86_RS12985at 2915.033 kb on - strand, within ABZR86_RS12985at 2915.033 kb on - strand, within ABZR86_RS12985at 2915.113 kb on + strand, within ABZR86_RS12985at 2915.114 kb on - strand, within ABZR86_RS12985at 2915.283 kb on - strandat 2915.283 kb on - strandat 2915.289 kb on - strandat 2915.289 kb on - strandat 2915.310 kb on + strandat 2915.310 kb on + strandat 2915.311 kb on - strandat 2915.337 kb on + strandat 2915.376 kb on + strandat 2915.446 kb on + strandat 2915.446 kb on + strandat 2915.446 kb on + strandat 2915.446 kb on + strandat 2915.447 kb on - strandat 2915.447 kb on - strandat 2915.447 kb on - strandat 2915.447 kb on - strandat 2915.447 kb on - strandat 2915.447 kb on - strandat 2915.447 kb on - strandat 2915.557 kb on + strandat 2915.610 kb on + strand, within ABZR86_RS12990at 2915.611 kb on - strand, within ABZR86_RS12990at 2915.611 kb on - strand, within ABZR86_RS12990at 2915.614 kb on + strand, within ABZR86_RS12990at 2915.614 kb on + strand, within ABZR86_RS12990at 2915.614 kb on + strand, within ABZR86_RS12990at 2915.614 kb on + strand, within ABZR86_RS12990at 2915.614 kb on + strand, within ABZR86_RS12990at 2915.614 kb on + strand, within ABZR86_RS12990at 2915.614 kb on + strand, within ABZR86_RS12990at 2915.614 kb on + strand, within ABZR86_RS12990at 2915.614 kb on + strand, within ABZR86_RS12990at 2915.614 kb on + strand, within ABZR86_RS12990at 2915.614 kb on + strand, within ABZR86_RS12990at 2915.614 kb on + strand, within ABZR86_RS12990at 2915.614 kb on + strand, within ABZR86_RS12990at 2915.614 kb on + strand, within ABZR86_RS12990at 2915.614 kb on + strand, within ABZR86_RS12990at 2915.614 kb on + strand, within ABZR86_RS12990at 2915.614 kb on + strand, within ABZR86_RS12990at 2915.614 kb on + strand, within ABZR86_RS12990at 2915.614 kb on + strand, within ABZR86_RS12990at 2915.614 kb on + strand, within ABZR86_RS12990at 2915.614 kb on + strand, within ABZR86_RS12990at 2915.614 kb on + strand, within ABZR86_RS12990at 2915.614 kb on + strand, within ABZR86_RS12990at 2915.614 kb on + strand, within ABZR86_RS12990at 2915.615 kb on - strand, within ABZR86_RS12990at 2915.615 kb on - strand, within ABZR86_RS12990at 2915.615 kb on - strand, within ABZR86_RS12990at 2915.615 kb on - strand, within ABZR86_RS12990at 2915.615 kb on - strand, within ABZR86_RS12990at 2915.615 kb on - strand, within ABZR86_RS12990at 2915.615 kb on - strand, within ABZR86_RS12990at 2915.615 kb on - strand, within ABZR86_RS12990at 2915.615 kb on - strand, within ABZR86_RS12990at 2915.615 kb on - strand, within ABZR86_RS12990at 2915.615 kb on - strand, within ABZR86_RS12990at 2915.615 kb on - strand, within ABZR86_RS12990at 2915.615 kb on - strand, within ABZR86_RS12990at 2915.615 kb on - strand, within ABZR86_RS12990at 2915.615 kb on - strand, within ABZR86_RS12990at 2915.615 kb on - strand, within ABZR86_RS12990at 2915.615 kb on - strand, within ABZR86_RS12990at 2915.615 kb on - strand, within ABZR86_RS12990at 2915.615 kb on - strand, within ABZR86_RS12990at 2915.615 kb on - strand, within ABZR86_RS12990at 2915.615 kb on - strand, within ABZR86_RS12990at 2915.857 kb on + strandat 2915.857 kb on + strandat 2915.857 kb on + strandat 2915.857 kb on + strandat 2915.858 kb on - strandat 2915.858 kb on - strandat 2915.858 kb on - strandat 2915.858 kb on - strandat 2915.870 kb on + strandat 2915.871 kb on - strandat 2915.888 kb on + strandat 2915.888 kb on + strandat 2915.888 kb on + strandat 2915.888 kb on + strandat 2915.889 kb on - strandat 2915.889 kb on - strandat 2915.889 kb on - strandat 2915.889 kb on - strandat 2915.889 kb on - strandat 2915.913 kb on + strandat 2915.913 kb on + strandat 2915.913 kb on + strandat 2915.914 kb on - strandat 2915.914 kb on - strandat 2915.914 kb on - strandat 2915.914 kb on - strandat 2915.914 kb on - strandat 2915.914 kb on - strandat 2915.916 kb on - strandat 2915.916 kb on - strandat 2915.916 kb on - strandat 2915.933 kb on + strandat 2915.934 kb on - strandat 2916.170 kb on + strandat 2916.170 kb on + strandat 2916.171 kb on - strandat 2916.171 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Maltose (C)
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2,912,915 + ABZR86_RS12980 0.54 -0.6
2,912,915 + ABZR86_RS12980 0.54 +0.4
2,912,915 + ABZR86_RS12980 0.54 -0.0
2,912,915 + ABZR86_RS12980 0.54 +0.2
2,912,915 + ABZR86_RS12980 0.54 +0.7
2,912,915 + ABZR86_RS12980 0.54 +0.1
2,912,915 + ABZR86_RS12980 0.54 -0.0
2,912,915 + ABZR86_RS12980 0.54 -0.1
2,912,916 - ABZR86_RS12980 0.54 +0.3
2,912,916 - ABZR86_RS12980 0.54 +0.3
2,912,916 - ABZR86_RS12980 0.54 -0.6
2,913,011 + ABZR86_RS12980 0.61 +1.1
2,913,012 - ABZR86_RS12980 0.61 -0.7
2,913,248 + ABZR86_RS12980 0.77 +1.0
2,913,249 - ABZR86_RS12980 0.77 +0.9
2,913,281 + ABZR86_RS12980 0.80 +0.1
2,913,282 - ABZR86_RS12980 0.80 -0.2
2,913,282 - ABZR86_RS12980 0.80 -0.4
2,913,332 - ABZR86_RS12980 0.83 +0.3
2,913,332 - ABZR86_RS12980 0.83 +0.0
2,913,365 + ABZR86_RS12980 0.86 -0.2
2,913,366 - ABZR86_RS12980 0.86 +0.8
2,913,366 - ABZR86_RS12980 0.86 -0.2
2,913,425 + ABZR86_RS12980 0.90 +0.5
2,913,518 + +0.0
2,913,594 - +0.6
2,913,594 - -0.1
2,913,691 - +1.0
2,913,753 - -0.3
2,913,820 + -0.0
2,913,821 - -0.9
2,913,829 + +1.0
2,913,830 - +0.3
2,913,830 - -0.9
2,913,838 + +0.5
2,913,839 - +0.1
2,913,839 - +0.2
2,913,868 + -0.4
2,913,869 - +0.6
2,913,923 + +0.4
2,913,923 + -0.9
2,913,923 + +0.7
2,913,924 - -0.7
2,913,924 - -0.0
2,913,944 + +0.7
2,913,944 + +1.4
2,913,944 + +0.0
2,913,944 + -0.6
2,913,944 + +0.2
2,913,944 + +0.4
2,913,944 + +0.9
2,913,944 + -0.5
2,913,944 + +0.4
2,913,944 + +0.6
2,913,945 - +0.5
2,913,945 - +0.3
2,913,945 - +0.3
2,913,945 - -2.0
2,913,945 - +0.6
2,913,953 - +0.2
2,913,953 - -0.7
2,913,953 - -3.5
2,913,988 + ABZR86_RS12985 0.11 +0.5
2,913,988 + ABZR86_RS12985 0.11 +0.4
2,913,988 + ABZR86_RS12985 0.11 +0.4
2,913,989 - ABZR86_RS12985 0.11 +0.7
2,913,989 - ABZR86_RS12985 0.11 +0.8
2,913,989 - ABZR86_RS12985 0.11 +0.0
2,913,989 - ABZR86_RS12985 0.11 -0.1
2,914,111 + ABZR86_RS12985 0.20 +0.4
2,914,111 + ABZR86_RS12985 0.20 -0.1
2,914,111 + ABZR86_RS12985 0.20 +0.2
2,914,111 + ABZR86_RS12985 0.20 -0.2
2,914,111 + ABZR86_RS12985 0.20 +0.3
2,914,111 + ABZR86_RS12985 0.20 +0.5
2,914,112 - ABZR86_RS12985 0.20 -0.7
2,914,112 - ABZR86_RS12985 0.20 -0.1
2,914,112 - ABZR86_RS12985 0.20 -0.8
2,914,112 - ABZR86_RS12985 0.20 +0.5
2,914,114 + ABZR86_RS12985 0.20 +1.0
2,914,115 - ABZR86_RS12985 0.20 -0.5
2,914,135 + ABZR86_RS12985 0.21 +0.6
2,914,136 - ABZR86_RS12985 0.21 +0.5
2,914,136 - ABZR86_RS12985 0.21 +0.7
2,914,157 - ABZR86_RS12985 0.23 +0.5
2,914,192 + ABZR86_RS12985 0.25 +0.6
2,914,193 - ABZR86_RS12985 0.25 +0.5
2,914,496 - ABZR86_RS12985 0.46 +1.2
2,914,517 - ABZR86_RS12985 0.48 +0.0
2,914,733 + ABZR86_RS12985 0.63 +0.5
2,914,733 + ABZR86_RS12985 0.63 -0.6
2,914,733 + ABZR86_RS12985 0.63 +0.0
2,914,734 - ABZR86_RS12985 0.63 +0.1
2,914,825 + ABZR86_RS12985 0.69 +0.2
2,914,868 + ABZR86_RS12985 0.72 +0.8
2,915,032 + ABZR86_RS12985 0.84 +0.1
2,915,033 - ABZR86_RS12985 0.84 -0.2
2,915,033 - ABZR86_RS12985 0.84 +0.6
2,915,033 - ABZR86_RS12985 0.84 +0.7
2,915,033 - ABZR86_RS12985 0.84 +0.6
2,915,033 - ABZR86_RS12985 0.84 +0.4
2,915,113 + ABZR86_RS12985 0.89 -0.3
2,915,114 - ABZR86_RS12985 0.89 +1.2
2,915,283 - -0.6
2,915,283 - +0.2
2,915,289 - +0.2
2,915,289 - +0.4
2,915,310 + +0.2
2,915,310 + -0.3
2,915,311 - -0.3
2,915,337 + -0.3
2,915,376 + +0.2
2,915,446 + -0.2
2,915,446 + -2.6
2,915,446 + +0.4
2,915,446 + -0.4
2,915,447 - +0.3
2,915,447 - +0.2
2,915,447 - +0.1
2,915,447 - +0.0
2,915,447 - +0.4
2,915,447 - +0.8
2,915,447 - -0.7
2,915,557 + +1.1
2,915,610 + ABZR86_RS12990 0.13 -0.2
2,915,611 - ABZR86_RS12990 0.14 +0.8
2,915,611 - ABZR86_RS12990 0.14 +0.7
2,915,614 + ABZR86_RS12990 0.15 +0.8
2,915,614 + ABZR86_RS12990 0.15 +0.9
2,915,614 + ABZR86_RS12990 0.15 +1.4
2,915,614 + ABZR86_RS12990 0.15 +0.1
2,915,614 + ABZR86_RS12990 0.15 +0.4
2,915,614 + ABZR86_RS12990 0.15 -0.5
2,915,614 + ABZR86_RS12990 0.15 -0.5
2,915,614 + ABZR86_RS12990 0.15 +1.1
2,915,614 + ABZR86_RS12990 0.15 +0.3
2,915,614 + ABZR86_RS12990 0.15 -0.2
2,915,614 + ABZR86_RS12990 0.15 +0.0
2,915,614 + ABZR86_RS12990 0.15 -0.2
2,915,614 + ABZR86_RS12990 0.15 -0.4
2,915,614 + ABZR86_RS12990 0.15 -0.2
2,915,614 + ABZR86_RS12990 0.15 -0.8
2,915,614 + ABZR86_RS12990 0.15 -0.4
2,915,614 + ABZR86_RS12990 0.15 +0.7
2,915,614 + ABZR86_RS12990 0.15 -0.7
2,915,614 + ABZR86_RS12990 0.15 +0.0
2,915,614 + ABZR86_RS12990 0.15 -0.9
2,915,614 + ABZR86_RS12990 0.15 -0.5
2,915,614 + ABZR86_RS12990 0.15 -1.4
2,915,614 + ABZR86_RS12990 0.15 -0.3
2,915,614 + ABZR86_RS12990 0.15 -0.5
2,915,615 - ABZR86_RS12990 0.15 +0.4
2,915,615 - ABZR86_RS12990 0.15 +0.1
2,915,615 - ABZR86_RS12990 0.15 -0.2
2,915,615 - ABZR86_RS12990 0.15 -0.6
2,915,615 - ABZR86_RS12990 0.15 +0.3
2,915,615 - ABZR86_RS12990 0.15 +0.7
2,915,615 - ABZR86_RS12990 0.15 +0.1
2,915,615 - ABZR86_RS12990 0.15 -0.1
2,915,615 - ABZR86_RS12990 0.15 +0.4
2,915,615 - ABZR86_RS12990 0.15 -0.0
2,915,615 - ABZR86_RS12990 0.15 +0.5
2,915,615 - ABZR86_RS12990 0.15 +2.7
2,915,615 - ABZR86_RS12990 0.15 +0.1
2,915,615 - ABZR86_RS12990 0.15 -0.4
2,915,615 - ABZR86_RS12990 0.15 +0.9
2,915,615 - ABZR86_RS12990 0.15 -0.1
2,915,615 - ABZR86_RS12990 0.15 -0.5
2,915,615 - ABZR86_RS12990 0.15 -0.0
2,915,615 - ABZR86_RS12990 0.15 +0.1
2,915,615 - ABZR86_RS12990 0.15 +0.6
2,915,615 - ABZR86_RS12990 0.15 -0.8
2,915,857 + -0.4
2,915,857 + -1.4
2,915,857 + -0.1
2,915,857 + -2.4
2,915,858 - -0.0
2,915,858 - +2.6
2,915,858 - +0.4
2,915,858 - -0.0
2,915,870 + -0.5
2,915,871 - -1.6
2,915,888 + -2.9
2,915,888 + -1.6
2,915,888 + -2.9
2,915,888 + +0.4
2,915,889 - +0.1
2,915,889 - +0.0
2,915,889 - +0.3
2,915,889 - -0.2
2,915,889 - -0.9
2,915,913 + +0.7
2,915,913 + -0.0
2,915,913 + -0.1
2,915,914 - +0.7
2,915,914 - -0.2
2,915,914 - -0.7
2,915,914 - +0.4
2,915,914 - +0.0
2,915,914 - +0.1
2,915,916 - -0.2
2,915,916 - +0.6
2,915,916 - -0.2
2,915,933 + +0.9
2,915,934 - +0.9
2,916,170 + +1.2
2,916,170 + +0.8
2,916,171 - +1.1
2,916,171 - +0.1

Or see this region's nucleotide sequence