Experiment: D-Maltose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS12800 and ABZR86_RS12805 are separated by 55 nucleotides ABZR86_RS12805 and ABZR86_RS12810 are separated by 196 nucleotides ABZR86_RS12810 and ABZR86_RS12815 are separated by 13 nucleotides ABZR86_RS12815 and ABZR86_RS12820 are separated by 138 nucleotides ABZR86_RS12820 and ABZR86_RS12825 overlap by 4 nucleotides
ABZR86_RS12800: ABZR86_RS12800 - tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD, at 2,869,797 to 2,870,846
_RS12800
ABZR86_RS12805: ABZR86_RS12805 - 30S ribosomal protein S21, at 2,870,902 to 2,871,117
_RS12805
ABZR86_RS12810: ABZR86_RS12810 - GatB/YqeY domain-containing protein, at 2,871,314 to 2,871,760
_RS12810
ABZR86_RS12815: ABZR86_RS12815 - hypothetical protein, at 2,871,774 to 2,872,094
_RS12815
ABZR86_RS12820: ABZR86_RS12820 - DUF1328 domain-containing protein, at 2,872,233 to 2,872,403
_RS12820
ABZR86_RS12825: ABZR86_RS12825 - N-acetyltransferase, at 2,872,400 to 2,872,978
_RS12825
Position (kb)
2871
2872 Strain fitness (log2 ratio)
-1
0
1 at 2871.102 kb on + strand at 2871.112 kb on + strand at 2871.178 kb on + strand at 2871.185 kb on + strand at 2871.186 kb on - strand at 2871.272 kb on + strand at 2871.273 kb on - strand at 2871.512 kb on + strand, within ABZR86_RS12810 at 2871.513 kb on - strand, within ABZR86_RS12810 at 2871.578 kb on + strand, within ABZR86_RS12810 at 2871.579 kb on - strand, within ABZR86_RS12810 at 2871.579 kb on - strand, within ABZR86_RS12810 at 2871.579 kb on - strand, within ABZR86_RS12810 at 2871.919 kb on + strand, within ABZR86_RS12815 at 2871.919 kb on + strand, within ABZR86_RS12815 at 2871.919 kb on + strand, within ABZR86_RS12815 at 2871.920 kb on - strand, within ABZR86_RS12815 at 2871.920 kb on - strand, within ABZR86_RS12815 at 2871.967 kb on + strand, within ABZR86_RS12815 at 2871.967 kb on + strand, within ABZR86_RS12815 at 2872.022 kb on + strand, within ABZR86_RS12815 at 2872.110 kb on + strand at 2872.111 kb on - strand at 2872.111 kb on - strand at 2872.111 kb on - strand at 2872.111 kb on - strand at 2872.215 kb on + strand at 2872.216 kb on - strand at 2872.221 kb on - strand at 2872.293 kb on + strand, within ABZR86_RS12820 at 2872.294 kb on - strand, within ABZR86_RS12820 at 2872.501 kb on - strand, within ABZR86_RS12825 at 2872.650 kb on + strand, within ABZR86_RS12825 at 2872.650 kb on + strand, within ABZR86_RS12825 at 2872.650 kb on + strand, within ABZR86_RS12825 at 2872.650 kb on + strand, within ABZR86_RS12825 at 2872.651 kb on - strand, within ABZR86_RS12825 at 2872.651 kb on - strand, within ABZR86_RS12825
Per-strain Table
Position Strand Gene LocusTag Fraction D-Maltose (C) remove 2,871,102 + +1.0 2,871,112 + -0.5 2,871,178 + +0.3 2,871,185 + +0.3 2,871,186 - +1.0 2,871,272 + -0.6 2,871,273 - -1.1 2,871,512 + ABZR86_RS12810 0.44 +1.2 2,871,513 - ABZR86_RS12810 0.45 +0.3 2,871,578 + ABZR86_RS12810 0.59 +0.5 2,871,579 - ABZR86_RS12810 0.59 +0.0 2,871,579 - ABZR86_RS12810 0.59 +0.2 2,871,579 - ABZR86_RS12810 0.59 -1.4 2,871,919 + ABZR86_RS12815 0.45 +0.5 2,871,919 + ABZR86_RS12815 0.45 -0.5 2,871,919 + ABZR86_RS12815 0.45 -0.4 2,871,920 - ABZR86_RS12815 0.45 -0.1 2,871,920 - ABZR86_RS12815 0.45 -0.1 2,871,967 + ABZR86_RS12815 0.60 +1.1 2,871,967 + ABZR86_RS12815 0.60 +0.8 2,872,022 + ABZR86_RS12815 0.77 +0.0 2,872,110 + +0.7 2,872,111 - -0.5 2,872,111 - +1.1 2,872,111 - +0.1 2,872,111 - -0.4 2,872,215 + -1.3 2,872,216 - +0.7 2,872,221 - +0.1 2,872,293 + ABZR86_RS12820 0.35 +0.8 2,872,294 - ABZR86_RS12820 0.36 -0.6 2,872,501 - ABZR86_RS12825 0.17 -0.3 2,872,650 + ABZR86_RS12825 0.43 +0.4 2,872,650 + ABZR86_RS12825 0.43 +0.1 2,872,650 + ABZR86_RS12825 0.43 -0.0 2,872,650 + ABZR86_RS12825 0.43 -0.3 2,872,651 - ABZR86_RS12825 0.43 -0.6 2,872,651 - ABZR86_RS12825 0.43 +0.9
Or see this region's nucleotide sequence