Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS08665

Experiment: D-Maltose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR86_RS08655 and ABZR86_RS08660 are separated by 22 nucleotidesABZR86_RS08660 and ABZR86_RS08665 are separated by 101 nucleotidesABZR86_RS08665 and ABZR86_RS08670 are separated by 100 nucleotides ABZR86_RS08655: ABZR86_RS08655 - amidohydrolase family protein, at 1,938,466 to 1,939,479 _RS08655 ABZR86_RS08660: ABZR86_RS08660 - hypothetical protein, at 1,939,502 to 1,940,008 _RS08660 ABZR86_RS08665: ABZR86_RS08665 - kynureninase, at 1,940,110 to 1,941,396 _RS08665 ABZR86_RS08670: ABZR86_RS08670 - esterase-like activity of phytase family protein, at 1,941,497 to 1,942,891 _RS08670 Position (kb) 1940 1941 1942Strain fitness (log2 ratio) -2 -1 0 1 2at 1939.237 kb on + strand, within ABZR86_RS08655at 1939.238 kb on - strand, within ABZR86_RS08655at 1939.238 kb on - strand, within ABZR86_RS08655at 1939.252 kb on + strand, within ABZR86_RS08655at 1939.253 kb on - strand, within ABZR86_RS08655at 1939.291 kb on + strand, within ABZR86_RS08655at 1939.291 kb on + strand, within ABZR86_RS08655at 1939.291 kb on + strand, within ABZR86_RS08655at 1939.291 kb on + strand, within ABZR86_RS08655at 1939.339 kb on + strand, within ABZR86_RS08655at 1939.340 kb on - strand, within ABZR86_RS08655at 1939.757 kb on + strand, within ABZR86_RS08660at 1939.758 kb on - strand, within ABZR86_RS08660at 1939.758 kb on - strand, within ABZR86_RS08660at 1939.838 kb on + strand, within ABZR86_RS08660at 1939.838 kb on + strand, within ABZR86_RS08660at 1939.838 kb on + strand, within ABZR86_RS08660at 1939.838 kb on + strand, within ABZR86_RS08660at 1939.839 kb on - strand, within ABZR86_RS08660at 1939.839 kb on - strand, within ABZR86_RS08660at 1939.839 kb on - strand, within ABZR86_RS08660at 1939.839 kb on - strand, within ABZR86_RS08660at 1939.839 kb on - strand, within ABZR86_RS08660at 1939.871 kb on + strand, within ABZR86_RS08660at 1939.871 kb on + strand, within ABZR86_RS08660at 1939.871 kb on + strand, within ABZR86_RS08660at 1939.871 kb on + strand, within ABZR86_RS08660at 1939.871 kb on + strand, within ABZR86_RS08660at 1939.871 kb on + strand, within ABZR86_RS08660at 1939.872 kb on - strand, within ABZR86_RS08660at 1939.872 kb on - strand, within ABZR86_RS08660at 1939.872 kb on - strand, within ABZR86_RS08660at 1939.883 kb on + strand, within ABZR86_RS08660at 1940.007 kb on - strandat 1940.072 kb on + strandat 1940.073 kb on - strandat 1940.073 kb on - strandat 1940.073 kb on - strandat 1940.122 kb on + strandat 1940.122 kb on + strandat 1940.123 kb on - strandat 1940.329 kb on - strand, within ABZR86_RS08665at 1940.353 kb on + strand, within ABZR86_RS08665at 1940.354 kb on - strand, within ABZR86_RS08665at 1940.362 kb on + strand, within ABZR86_RS08665at 1940.362 kb on + strand, within ABZR86_RS08665at 1940.362 kb on + strand, within ABZR86_RS08665at 1940.362 kb on + strand, within ABZR86_RS08665at 1940.362 kb on + strand, within ABZR86_RS08665at 1940.362 kb on + strand, within ABZR86_RS08665at 1940.465 kb on - strand, within ABZR86_RS08665at 1940.527 kb on + strand, within ABZR86_RS08665at 1940.527 kb on + strand, within ABZR86_RS08665at 1940.527 kb on + strand, within ABZR86_RS08665at 1940.528 kb on - strand, within ABZR86_RS08665at 1940.843 kb on - strand, within ABZR86_RS08665at 1940.843 kb on - strand, within ABZR86_RS08665at 1940.843 kb on - strand, within ABZR86_RS08665at 1940.843 kb on - strand, within ABZR86_RS08665at 1940.849 kb on - strand, within ABZR86_RS08665at 1941.053 kb on + strand, within ABZR86_RS08665at 1941.121 kb on + strand, within ABZR86_RS08665at 1941.328 kb on + strandat 1941.328 kb on + strandat 1941.403 kb on + strandat 1941.493 kb on + strandat 1941.493 kb on + strandat 1941.494 kb on - strandat 1941.855 kb on + strand, within ABZR86_RS08670at 1941.855 kb on + strand, within ABZR86_RS08670at 1941.855 kb on + strand, within ABZR86_RS08670at 1941.856 kb on - strand, within ABZR86_RS08670at 1941.964 kb on - strand, within ABZR86_RS08670at 1941.964 kb on - strand, within ABZR86_RS08670at 1942.009 kb on - strand, within ABZR86_RS08670at 1942.174 kb on + strand, within ABZR86_RS08670at 1942.174 kb on + strand, within ABZR86_RS08670at 1942.174 kb on + strand, within ABZR86_RS08670at 1942.174 kb on + strand, within ABZR86_RS08670at 1942.174 kb on + strand, within ABZR86_RS08670at 1942.175 kb on - strand, within ABZR86_RS08670at 1942.221 kb on + strand, within ABZR86_RS08670at 1942.222 kb on - strand, within ABZR86_RS08670at 1942.242 kb on + strand, within ABZR86_RS08670at 1942.281 kb on + strand, within ABZR86_RS08670at 1942.281 kb on + strand, within ABZR86_RS08670at 1942.282 kb on - strand, within ABZR86_RS08670at 1942.282 kb on - strand, within ABZR86_RS08670at 1942.287 kb on + strand, within ABZR86_RS08670at 1942.287 kb on + strand, within ABZR86_RS08670at 1942.288 kb on - strand, within ABZR86_RS08670at 1942.288 kb on - strand, within ABZR86_RS08670at 1942.288 kb on - strand, within ABZR86_RS08670at 1942.288 kb on - strand, within ABZR86_RS08670at 1942.297 kb on - strand, within ABZR86_RS08670

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Maltose (C)
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1,939,237 + ABZR86_RS08655 0.76 +0.2
1,939,238 - ABZR86_RS08655 0.76 +0.5
1,939,238 - ABZR86_RS08655 0.76 -1.1
1,939,252 + ABZR86_RS08655 0.78 +0.2
1,939,253 - ABZR86_RS08655 0.78 +0.0
1,939,291 + ABZR86_RS08655 0.81 +1.4
1,939,291 + ABZR86_RS08655 0.81 -0.1
1,939,291 + ABZR86_RS08655 0.81 +1.0
1,939,291 + ABZR86_RS08655 0.81 +0.7
1,939,339 + ABZR86_RS08655 0.86 +0.2
1,939,340 - ABZR86_RS08655 0.86 -0.6
1,939,757 + ABZR86_RS08660 0.50 +0.7
1,939,758 - ABZR86_RS08660 0.50 +0.6
1,939,758 - ABZR86_RS08660 0.50 +0.3
1,939,838 + ABZR86_RS08660 0.66 +0.3
1,939,838 + ABZR86_RS08660 0.66 +0.0
1,939,838 + ABZR86_RS08660 0.66 +0.7
1,939,838 + ABZR86_RS08660 0.66 +0.7
1,939,839 - ABZR86_RS08660 0.66 -1.0
1,939,839 - ABZR86_RS08660 0.66 +0.4
1,939,839 - ABZR86_RS08660 0.66 +0.0
1,939,839 - ABZR86_RS08660 0.66 +0.4
1,939,839 - ABZR86_RS08660 0.66 +0.8
1,939,871 + ABZR86_RS08660 0.73 -0.1
1,939,871 + ABZR86_RS08660 0.73 -0.4
1,939,871 + ABZR86_RS08660 0.73 -0.1
1,939,871 + ABZR86_RS08660 0.73 -0.2
1,939,871 + ABZR86_RS08660 0.73 +1.0
1,939,871 + ABZR86_RS08660 0.73 +0.2
1,939,872 - ABZR86_RS08660 0.73 +0.1
1,939,872 - ABZR86_RS08660 0.73 +0.3
1,939,872 - ABZR86_RS08660 0.73 +0.4
1,939,883 + ABZR86_RS08660 0.75 +1.0
1,940,007 - +0.1
1,940,072 + +0.5
1,940,073 - -0.2
1,940,073 - -1.6
1,940,073 - -0.3
1,940,122 + -1.0
1,940,122 + +0.2
1,940,123 - +0.0
1,940,329 - ABZR86_RS08665 0.17 +0.3
1,940,353 + ABZR86_RS08665 0.19 +0.3
1,940,354 - ABZR86_RS08665 0.19 +0.6
1,940,362 + ABZR86_RS08665 0.20 +0.1
1,940,362 + ABZR86_RS08665 0.20 -0.9
1,940,362 + ABZR86_RS08665 0.20 -1.3
1,940,362 + ABZR86_RS08665 0.20 -0.0
1,940,362 + ABZR86_RS08665 0.20 +0.1
1,940,362 + ABZR86_RS08665 0.20 +0.0
1,940,465 - ABZR86_RS08665 0.28 -0.1
1,940,527 + ABZR86_RS08665 0.32 -2.3
1,940,527 + ABZR86_RS08665 0.32 +0.0
1,940,527 + ABZR86_RS08665 0.32 -0.4
1,940,528 - ABZR86_RS08665 0.32 -0.1
1,940,843 - ABZR86_RS08665 0.57 +0.4
1,940,843 - ABZR86_RS08665 0.57 +1.6
1,940,843 - ABZR86_RS08665 0.57 -0.6
1,940,843 - ABZR86_RS08665 0.57 +0.0
1,940,849 - ABZR86_RS08665 0.57 +1.8
1,941,053 + ABZR86_RS08665 0.73 +0.0
1,941,121 + ABZR86_RS08665 0.79 +0.4
1,941,328 + +0.1
1,941,328 + -0.2
1,941,403 + +0.0
1,941,493 + +0.2
1,941,493 + -0.4
1,941,494 - -0.8
1,941,855 + ABZR86_RS08670 0.26 -0.8
1,941,855 + ABZR86_RS08670 0.26 +0.4
1,941,855 + ABZR86_RS08670 0.26 +0.3
1,941,856 - ABZR86_RS08670 0.26 -0.7
1,941,964 - ABZR86_RS08670 0.33 -0.8
1,941,964 - ABZR86_RS08670 0.33 -0.6
1,942,009 - ABZR86_RS08670 0.37 +1.0
1,942,174 + ABZR86_RS08670 0.49 +0.5
1,942,174 + ABZR86_RS08670 0.49 -0.1
1,942,174 + ABZR86_RS08670 0.49 +0.2
1,942,174 + ABZR86_RS08670 0.49 +0.1
1,942,174 + ABZR86_RS08670 0.49 -1.9
1,942,175 - ABZR86_RS08670 0.49 -1.4
1,942,221 + ABZR86_RS08670 0.52 -0.2
1,942,222 - ABZR86_RS08670 0.52 -0.9
1,942,242 + ABZR86_RS08670 0.53 +0.2
1,942,281 + ABZR86_RS08670 0.56 -0.3
1,942,281 + ABZR86_RS08670 0.56 +0.8
1,942,282 - ABZR86_RS08670 0.56 +0.5
1,942,282 - ABZR86_RS08670 0.56 -0.6
1,942,287 + ABZR86_RS08670 0.57 +0.2
1,942,287 + ABZR86_RS08670 0.57 +0.2
1,942,288 - ABZR86_RS08670 0.57 +0.0
1,942,288 - ABZR86_RS08670 0.57 +0.2
1,942,288 - ABZR86_RS08670 0.57 +0.0
1,942,288 - ABZR86_RS08670 0.57 -1.3
1,942,297 - ABZR86_RS08670 0.57 -0.2

Or see this region's nucleotide sequence