Experiment: D-Maltose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS08330 and ABZR86_RS08335 are separated by 480 nucleotides ABZR86_RS08335 and ABZR86_RS08340 are separated by 207 nucleotides
ABZR86_RS08330: ABZR86_RS08330 - PIN domain-containing protein, at 1,856,266 to 1,856,832
_RS08330
ABZR86_RS08335: ABZR86_RS08335 - hypothetical protein, at 1,857,313 to 1,857,771
_RS08335
ABZR86_RS08340: ABZR86_RS08340 - adenylosuccinate synthase, at 1,857,979 to 1,859,271
_RS08340
Position (kb)
1857
1858 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 1856.523 kb on - strand, within ABZR86_RS08330 at 1856.630 kb on - strand, within ABZR86_RS08330 at 1856.630 kb on - strand, within ABZR86_RS08330 at 1856.766 kb on + strand, within ABZR86_RS08330 at 1856.766 kb on + strand, within ABZR86_RS08330 at 1856.767 kb on - strand, within ABZR86_RS08330 at 1856.767 kb on - strand, within ABZR86_RS08330 at 1856.828 kb on + strand at 1856.828 kb on + strand at 1856.829 kb on - strand at 1856.829 kb on - strand at 1856.829 kb on - strand at 1856.829 kb on - strand at 1856.829 kb on - strand at 1856.830 kb on + strand at 1856.830 kb on + strand at 1856.830 kb on + strand at 1856.830 kb on + strand at 1856.830 kb on + strand at 1856.830 kb on + strand at 1856.942 kb on + strand at 1856.942 kb on + strand at 1856.943 kb on - strand at 1856.943 kb on - strand at 1857.091 kb on + strand at 1857.091 kb on + strand at 1857.091 kb on + strand at 1857.092 kb on - strand at 1857.092 kb on - strand at 1857.092 kb on - strand at 1857.092 kb on - strand at 1857.092 kb on - strand at 1857.118 kb on - strand at 1857.165 kb on - strand at 1857.201 kb on + strand at 1857.201 kb on + strand at 1857.201 kb on + strand at 1857.201 kb on + strand at 1857.202 kb on - strand at 1857.302 kb on - strand at 1857.335 kb on + strand at 1857.335 kb on + strand at 1857.335 kb on + strand at 1857.336 kb on - strand at 1857.336 kb on - strand at 1857.339 kb on + strand at 1857.339 kb on + strand at 1857.339 kb on + strand at 1857.339 kb on + strand at 1857.340 kb on - strand at 1857.340 kb on - strand at 1858.080 kb on - strand at 1858.080 kb on - strand at 1858.463 kb on + strand, within ABZR86_RS08340 at 1858.464 kb on - strand, within ABZR86_RS08340 at 1858.464 kb on - strand, within ABZR86_RS08340 at 1858.488 kb on - strand, within ABZR86_RS08340 at 1858.565 kb on + strand, within ABZR86_RS08340 at 1858.566 kb on - strand, within ABZR86_RS08340 at 1858.610 kb on + strand, within ABZR86_RS08340 at 1858.610 kb on + strand, within ABZR86_RS08340 at 1858.611 kb on - strand, within ABZR86_RS08340
Per-strain Table
Position Strand Gene LocusTag Fraction D-Maltose (C) remove 1,856,523 - ABZR86_RS08330 0.45 +1.0 1,856,630 - ABZR86_RS08330 0.64 +0.5 1,856,630 - ABZR86_RS08330 0.64 -0.1 1,856,766 + ABZR86_RS08330 0.88 -0.3 1,856,766 + ABZR86_RS08330 0.88 -0.1 1,856,767 - ABZR86_RS08330 0.88 +0.2 1,856,767 - ABZR86_RS08330 0.88 +0.8 1,856,828 + -0.0 1,856,828 + +0.2 1,856,829 - -1.2 1,856,829 - -1.0 1,856,829 - +0.2 1,856,829 - +0.1 1,856,829 - +0.3 1,856,830 + -0.4 1,856,830 + +0.3 1,856,830 + -0.1 1,856,830 + -1.0 1,856,830 + -0.1 1,856,830 + -0.1 1,856,942 + -0.0 1,856,942 + +0.2 1,856,943 - -1.0 1,856,943 - -1.1 1,857,091 + -0.1 1,857,091 + -0.1 1,857,091 + -0.0 1,857,092 - +0.5 1,857,092 - +0.4 1,857,092 - +0.4 1,857,092 - -1.8 1,857,092 - +0.1 1,857,118 - +0.3 1,857,165 - -1.1 1,857,201 + +0.2 1,857,201 + -0.4 1,857,201 + +0.6 1,857,201 + +0.1 1,857,202 - +0.7 1,857,302 - +0.3 1,857,335 + +0.1 1,857,335 + +0.7 1,857,335 + -0.1 1,857,336 - -1.3 1,857,336 - +0.4 1,857,339 + +0.3 1,857,339 + +0.4 1,857,339 + +0.3 1,857,339 + +0.3 1,857,340 - -0.2 1,857,340 - -1.3 1,858,080 - -3.3 1,858,080 - -2.3 1,858,463 + ABZR86_RS08340 0.37 -3.4 1,858,464 - ABZR86_RS08340 0.38 -4.3 1,858,464 - ABZR86_RS08340 0.38 -2.0 1,858,488 - ABZR86_RS08340 0.39 -4.0 1,858,565 + ABZR86_RS08340 0.45 -4.1 1,858,566 - ABZR86_RS08340 0.45 -3.8 1,858,610 + ABZR86_RS08340 0.49 -1.3 1,858,610 + ABZR86_RS08340 0.49 -3.3 1,858,611 - ABZR86_RS08340 0.49 -1.0
Or see this region's nucleotide sequence