Experiment: D-Maltose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS08130 and ABZR86_RS08135 are separated by 355 nucleotides ABZR86_RS08135 and ABZR86_RS08140 are separated by 78 nucleotides
ABZR86_RS08130: ABZR86_RS08130 - dCTP deaminase, at 1,813,575 to 1,814,141
_RS08130
ABZR86_RS08135: ABZR86_RS08135 - hypothetical protein, at 1,814,497 to 1,815,096
_RS08135
ABZR86_RS08140: ABZR86_RS08140 - iron-sulfur cluster carrier protein ApbC, at 1,815,175 to 1,816,269
_RS08140
Position (kb) 1814
1815
1816 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 1813.500 kb on + strand at 1813.500 kb on + strand at 1813.501 kb on - strand at 1813.501 kb on - strand at 1813.612 kb on + strand at 1813.612 kb on + strand at 1813.612 kb on + strand at 1813.613 kb on - strand at 1813.613 kb on - strand at 1813.613 kb on - strand at 1813.696 kb on + strand, within ABZR86_RS08130 at 1813.696 kb on + strand, within ABZR86_RS08130 at 1813.697 kb on - strand, within ABZR86_RS08130 at 1813.697 kb on - strand, within ABZR86_RS08130 at 1813.801 kb on + strand, within ABZR86_RS08130 at 1813.801 kb on + strand, within ABZR86_RS08130 at 1813.802 kb on - strand, within ABZR86_RS08130 at 1813.802 kb on - strand, within ABZR86_RS08130 at 1813.852 kb on + strand, within ABZR86_RS08130 at 1813.853 kb on - strand, within ABZR86_RS08130 at 1813.853 kb on - strand, within ABZR86_RS08130 at 1813.853 kb on - strand, within ABZR86_RS08130 at 1813.967 kb on + strand, within ABZR86_RS08130 at 1813.967 kb on + strand, within ABZR86_RS08130 at 1813.967 kb on + strand, within ABZR86_RS08130 at 1813.968 kb on - strand, within ABZR86_RS08130 at 1813.968 kb on - strand, within ABZR86_RS08130 at 1814.009 kb on - strand, within ABZR86_RS08130 at 1814.014 kb on + strand, within ABZR86_RS08130 at 1814.015 kb on - strand, within ABZR86_RS08130 at 1814.029 kb on + strand, within ABZR86_RS08130 at 1814.029 kb on + strand, within ABZR86_RS08130 at 1814.030 kb on - strand, within ABZR86_RS08130 at 1814.077 kb on + strand, within ABZR86_RS08130 at 1814.077 kb on + strand, within ABZR86_RS08130 at 1814.077 kb on + strand, within ABZR86_RS08130 at 1814.078 kb on - strand, within ABZR86_RS08130 at 1814.078 kb on - strand, within ABZR86_RS08130 at 1814.207 kb on + strand at 1814.207 kb on + strand at 1814.397 kb on + strand at 1814.800 kb on + strand, within ABZR86_RS08135 at 1815.095 kb on - strand at 1815.157 kb on + strand at 1815.157 kb on + strand at 1815.158 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Maltose (C) remove 1,813,500 + +0.5 1,813,500 + -0.5 1,813,501 - -0.7 1,813,501 - +0.3 1,813,612 + -1.5 1,813,612 + -1.1 1,813,612 + -0.6 1,813,613 - -1.5 1,813,613 - -1.1 1,813,613 - -1.3 1,813,696 + ABZR86_RS08130 0.21 -1.0 1,813,696 + ABZR86_RS08130 0.21 -1.1 1,813,697 - ABZR86_RS08130 0.22 -2.2 1,813,697 - ABZR86_RS08130 0.22 -1.6 1,813,801 + ABZR86_RS08130 0.40 -0.9 1,813,801 + ABZR86_RS08130 0.40 -0.6 1,813,802 - ABZR86_RS08130 0.40 -1.7 1,813,802 - ABZR86_RS08130 0.40 -0.8 1,813,852 + ABZR86_RS08130 0.49 -0.5 1,813,853 - ABZR86_RS08130 0.49 -4.6 1,813,853 - ABZR86_RS08130 0.49 -1.0 1,813,853 - ABZR86_RS08130 0.49 -0.8 1,813,967 + ABZR86_RS08130 0.69 -1.3 1,813,967 + ABZR86_RS08130 0.69 -1.7 1,813,967 + ABZR86_RS08130 0.69 -2.7 1,813,968 - ABZR86_RS08130 0.69 -1.2 1,813,968 - ABZR86_RS08130 0.69 -0.9 1,814,009 - ABZR86_RS08130 0.77 -1.2 1,814,014 + ABZR86_RS08130 0.77 -1.9 1,814,015 - ABZR86_RS08130 0.78 -1.0 1,814,029 + ABZR86_RS08130 0.80 -1.3 1,814,029 + ABZR86_RS08130 0.80 -0.9 1,814,030 - ABZR86_RS08130 0.80 +1.0 1,814,077 + ABZR86_RS08130 0.89 +2.6 1,814,077 + ABZR86_RS08130 0.89 -0.7 1,814,077 + ABZR86_RS08130 0.89 -0.6 1,814,078 - ABZR86_RS08130 0.89 +1.0 1,814,078 - ABZR86_RS08130 0.89 -1.1 1,814,207 + -0.5 1,814,207 + +0.3 1,814,397 + -0.6 1,814,800 + ABZR86_RS08135 0.51 +0.6 1,815,095 - -0.2 1,815,157 + +0.0 1,815,157 + -1.3 1,815,158 - +0.2
Or see this region's nucleotide sequence