Experiment: D-Maltose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS07895 and ABZR86_RS07900 are separated by 104 nucleotides ABZR86_RS07900 and ABZR86_RS07905 are separated by 48 nucleotides ABZR86_RS07905 and ABZR86_RS07910 are separated by 15 nucleotides ABZR86_RS07910 and ABZR86_RS07915 are separated by 28 nucleotides ABZR86_RS07915 and ABZR86_RS07920 are separated by 118 nucleotides
ABZR86_RS07895: ABZR86_RS07895 - TonB-dependent receptor, at 1,754,362 to 1,756,362
_RS07895
ABZR86_RS07900: ABZR86_RS07900 - transcriptional repressor, at 1,756,467 to 1,756,949
_RS07900
ABZR86_RS07905: ABZR86_RS07905 - hypothetical protein, at 1,756,998 to 1,757,276
_RS07905
ABZR86_RS07910: ABZR86_RS07910 - glutamate--tRNA ligase, at 1,757,292 to 1,758,692
_RS07910
ABZR86_RS07915: ABZR86_RS07915 - hypothetical protein, at 1,758,721 to 1,759,491
_RS07915
ABZR86_RS07920: ABZR86_RS07920 - DUF4399 domain-containing protein, at 1,759,610 to 1,760,044
_RS07920
Position (kb) 1757
1758
1759 Strain fitness (log2 ratio) -1
0
1 at 1756.360 kb on + strand at 1756.360 kb on + strand at 1756.360 kb on + strand at 1756.360 kb on + strand at 1756.360 kb on + strand at 1756.360 kb on + strand at 1756.361 kb on - strand at 1756.361 kb on - strand at 1756.361 kb on - strand at 1756.361 kb on - strand at 1756.780 kb on + strand, within ABZR86_RS07900 at 1756.780 kb on + strand, within ABZR86_RS07900 at 1756.781 kb on - strand, within ABZR86_RS07900 at 1756.974 kb on - strand at 1756.987 kb on + strand at 1756.988 kb on - strand at 1758.874 kb on + strand, within ABZR86_RS07915 at 1758.940 kb on + strand, within ABZR86_RS07915 at 1758.940 kb on + strand, within ABZR86_RS07915 at 1758.940 kb on + strand, within ABZR86_RS07915 at 1758.940 kb on + strand, within ABZR86_RS07915 at 1758.941 kb on - strand, within ABZR86_RS07915 at 1758.941 kb on - strand, within ABZR86_RS07915 at 1759.003 kb on + strand, within ABZR86_RS07915 at 1759.003 kb on + strand, within ABZR86_RS07915 at 1759.004 kb on - strand, within ABZR86_RS07915 at 1759.004 kb on - strand, within ABZR86_RS07915 at 1759.094 kb on + strand, within ABZR86_RS07915 at 1759.094 kb on + strand, within ABZR86_RS07915 at 1759.094 kb on + strand, within ABZR86_RS07915 at 1759.094 kb on + strand, within ABZR86_RS07915 at 1759.094 kb on + strand, within ABZR86_RS07915 at 1759.094 kb on + strand, within ABZR86_RS07915 at 1759.094 kb on + strand, within ABZR86_RS07915 at 1759.094 kb on + strand, within ABZR86_RS07915 at 1759.094 kb on + strand, within ABZR86_RS07915 at 1759.094 kb on + strand, within ABZR86_RS07915 at 1759.095 kb on - strand, within ABZR86_RS07915 at 1759.095 kb on - strand, within ABZR86_RS07915 at 1759.095 kb on - strand, within ABZR86_RS07915 at 1759.095 kb on - strand, within ABZR86_RS07915 at 1759.095 kb on - strand, within ABZR86_RS07915 at 1759.095 kb on - strand, within ABZR86_RS07915 at 1759.095 kb on - strand, within ABZR86_RS07915 at 1759.095 kb on - strand, within ABZR86_RS07915 at 1759.168 kb on + strand, within ABZR86_RS07915 at 1759.226 kb on - strand, within ABZR86_RS07915 at 1759.226 kb on - strand, within ABZR86_RS07915 at 1759.285 kb on + strand, within ABZR86_RS07915 at 1759.286 kb on - strand, within ABZR86_RS07915 at 1759.312 kb on + strand, within ABZR86_RS07915 at 1759.313 kb on - strand, within ABZR86_RS07915 at 1759.313 kb on - strand, within ABZR86_RS07915 at 1759.313 kb on - strand, within ABZR86_RS07915 at 1759.313 kb on - strand, within ABZR86_RS07915 at 1759.313 kb on - strand, within ABZR86_RS07915 at 1759.477 kb on + strand at 1759.477 kb on + strand at 1759.477 kb on + strand at 1759.477 kb on + strand at 1759.477 kb on + strand at 1759.478 kb on - strand at 1759.500 kb on + strand at 1759.501 kb on - strand at 1759.501 kb on - strand at 1759.585 kb on + strand at 1759.585 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Maltose (C) remove 1,756,360 + +0.4 1,756,360 + +0.4 1,756,360 + -0.3 1,756,360 + -0.6 1,756,360 + +0.5 1,756,360 + +0.1 1,756,361 - +0.8 1,756,361 - -0.3 1,756,361 - +0.5 1,756,361 - +0.4 1,756,780 + ABZR86_RS07900 0.65 -0.1 1,756,780 + ABZR86_RS07900 0.65 -0.5 1,756,781 - ABZR86_RS07900 0.65 +1.3 1,756,974 - -0.8 1,756,987 + +1.0 1,756,988 - +0.3 1,758,874 + ABZR86_RS07915 0.20 -0.8 1,758,940 + ABZR86_RS07915 0.28 -0.1 1,758,940 + ABZR86_RS07915 0.28 +0.1 1,758,940 + ABZR86_RS07915 0.28 +0.2 1,758,940 + ABZR86_RS07915 0.28 +0.2 1,758,941 - ABZR86_RS07915 0.29 -1.2 1,758,941 - ABZR86_RS07915 0.29 -0.1 1,759,003 + ABZR86_RS07915 0.37 +0.1 1,759,003 + ABZR86_RS07915 0.37 +0.1 1,759,004 - ABZR86_RS07915 0.37 -0.0 1,759,004 - ABZR86_RS07915 0.37 -0.0 1,759,094 + ABZR86_RS07915 0.48 +0.5 1,759,094 + ABZR86_RS07915 0.48 -0.2 1,759,094 + ABZR86_RS07915 0.48 +0.6 1,759,094 + ABZR86_RS07915 0.48 -0.4 1,759,094 + ABZR86_RS07915 0.48 +1.6 1,759,094 + ABZR86_RS07915 0.48 +0.5 1,759,094 + ABZR86_RS07915 0.48 -0.1 1,759,094 + ABZR86_RS07915 0.48 +0.5 1,759,094 + ABZR86_RS07915 0.48 +0.7 1,759,094 + ABZR86_RS07915 0.48 +0.7 1,759,095 - ABZR86_RS07915 0.49 +0.1 1,759,095 - ABZR86_RS07915 0.49 -0.4 1,759,095 - ABZR86_RS07915 0.49 -1.3 1,759,095 - ABZR86_RS07915 0.49 +1.2 1,759,095 - ABZR86_RS07915 0.49 +1.7 1,759,095 - ABZR86_RS07915 0.49 +0.4 1,759,095 - ABZR86_RS07915 0.49 +0.3 1,759,095 - ABZR86_RS07915 0.49 -0.0 1,759,168 + ABZR86_RS07915 0.58 +0.5 1,759,226 - ABZR86_RS07915 0.65 +0.3 1,759,226 - ABZR86_RS07915 0.65 +0.5 1,759,285 + ABZR86_RS07915 0.73 -0.8 1,759,286 - ABZR86_RS07915 0.73 +1.0 1,759,312 + ABZR86_RS07915 0.77 -0.6 1,759,313 - ABZR86_RS07915 0.77 +0.5 1,759,313 - ABZR86_RS07915 0.77 +0.2 1,759,313 - ABZR86_RS07915 0.77 +0.9 1,759,313 - ABZR86_RS07915 0.77 -0.5 1,759,313 - ABZR86_RS07915 0.77 +0.1 1,759,477 + +0.6 1,759,477 + -0.6 1,759,477 + -0.2 1,759,477 + +0.0 1,759,477 + +0.1 1,759,478 - +0.4 1,759,500 + +0.4 1,759,501 - -0.3 1,759,501 - -0.3 1,759,585 + -0.1 1,759,585 + -0.8
Or see this region's nucleotide sequence