Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2926
Experiment: MoYLS4 with Sisomicin 0.03125 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Sisomicin 0.03125 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,695,153 | - | -0.4 | |||
3,695,153 | - | +0.2 | |||
3,695,178 | + | +0.9 | |||
3,695,360 | - | DvMF_2925 | 0.32 | -0.0 | |
3,695,365 | - | DvMF_2925 | 0.32 | -0.1 | |
3,695,434 | - | DvMF_2925 | 0.41 | +0.7 | |
3,695,509 | + | DvMF_2925 | 0.51 | -0.3 | |
3,695,697 | + | DvMF_2925 | 0.75 | -0.1 | |
3,695,912 | + | +0.1 | |||
3,696,174 | + | -0.3 | |||
3,696,258 | + | DvMF_2926 | 0.13 | +0.3 | |
3,696,266 | - | DvMF_2926 | 0.13 | -0.5 | |
3,696,369 | - | DvMF_2926 | 0.19 | +0.0 | |
3,696,423 | + | DvMF_2926 | 0.23 | +0.0 | |
3,696,442 | - | DvMF_2926 | 0.24 | +1.3 | |
3,696,602 | + | DvMF_2926 | 0.34 | +2.4 | |
3,696,793 | + | DvMF_2926 | 0.45 | +0.2 | |
3,696,994 | + | DvMF_2926 | 0.57 | -0.7 | |
3,697,055 | + | DvMF_2926 | 0.61 | +0.5 | |
3,697,270 | - | DvMF_2926 | 0.74 | -0.7 | |
3,697,355 | + | DvMF_2926 | 0.79 | +0.1 | |
3,697,453 | + | DvMF_2926 | 0.85 | +0.0 | |
3,697,453 | + | DvMF_2926 | 0.85 | +0.2 | |
3,697,680 | + | -0.5 | |||
3,697,731 | + | -0.2 | |||
3,697,757 | + | -0.3 | |||
3,697,967 | - | -0.1 | |||
3,698,126 | - | +0.5 | |||
3,698,152 | + | -0.4 | |||
3,698,395 | + | garR | DvMF_2927 | 0.30 | -0.2 |
3,698,606 | - | garR | DvMF_2927 | 0.53 | -1.0 |
Or see this region's nucleotide sequence