Experiment: MoYLS4 with Sisomicin 0.03125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2775 and DvMF_2776 are separated by 58 nucleotides DvMF_2776 and DvMF_2777 are separated by 7 nucleotides DvMF_2777 and DvMF_2778 are separated by 3 nucleotides
DvMF_2775: DvMF_2775 - major facilitator superfamily MFS_1 (RefSeq), at 3,510,180 to 3,511,346
_2775
DvMF_2776: DvMF_2776 - hypothetical protein (RefSeq), at 3,511,405 to 3,511,956
_2776
DvMF_2777: DvMF_2777 - hypothetical protein (RefSeq), at 3,511,964 to 3,512,887
_2777
DvMF_2778: DvMF_2778 - PAS/PAC sensor signal transduction histidine kinase (RefSeq), at 3,512,891 to 3,515,362
_2778
Position (kb)
3511
3512 Strain fitness (log2 ratio)
-2
-1
0
1 at 3510.576 kb on - strand, within DvMF_2775 at 3510.923 kb on - strand, within DvMF_2775 at 3510.937 kb on - strand, within DvMF_2775 at 3511.040 kb on + strand, within DvMF_2775 at 3511.048 kb on - strand, within DvMF_2775 at 3511.050 kb on + strand, within DvMF_2775 at 3511.737 kb on - strand, within DvMF_2776 at 3511.796 kb on + strand, within DvMF_2776 at 3511.804 kb on - strand, within DvMF_2776 at 3512.071 kb on + strand, within DvMF_2777 at 3512.090 kb on + strand, within DvMF_2777 at 3512.166 kb on - strand, within DvMF_2777 at 3512.281 kb on - strand, within DvMF_2777 at 3512.326 kb on + strand, within DvMF_2777 at 3512.326 kb on + strand, within DvMF_2777 at 3512.524 kb on + strand, within DvMF_2777 at 3512.711 kb on - strand, within DvMF_2777 at 3512.782 kb on + strand, within DvMF_2777 at 3512.924 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Sisomicin 0.03125 mg/ml remove 3,510,576 - DvMF_2775 0.34 -0.3 3,510,923 - DvMF_2775 0.64 -0.7 3,510,937 - DvMF_2775 0.65 -1.9 3,511,040 + DvMF_2775 0.74 -0.3 3,511,048 - DvMF_2775 0.74 +0.0 3,511,050 + DvMF_2775 0.75 -0.2 3,511,737 - DvMF_2776 0.60 -0.3 3,511,796 + DvMF_2776 0.71 -0.9 3,511,804 - DvMF_2776 0.72 -2.2 3,512,071 + DvMF_2777 0.12 +0.1 3,512,090 + DvMF_2777 0.14 +0.0 3,512,166 - DvMF_2777 0.22 -0.0 3,512,281 - DvMF_2777 0.34 -0.0 3,512,326 + DvMF_2777 0.39 -0.1 3,512,326 + DvMF_2777 0.39 -1.0 3,512,524 + DvMF_2777 0.61 -0.5 3,512,711 - DvMF_2777 0.81 -1.4 3,512,782 + DvMF_2777 0.89 -0.0 3,512,924 + -0.4
Or see this region's nucleotide sequence