Experiment: MoYLS4 with Sisomicin 0.03125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2718 and DvMF_2719 are separated by 396 nucleotides DvMF_2719 and DvMF_2720 overlap by 4 nucleotides DvMF_2720 and DvMF_2721 are separated by 243 nucleotides
DvMF_2718: DvMF_2718 - signal peptidase I (RefSeq), at 3,442,323 to 3,442,919
_2718
DvMF_2719: DvMF_2719 - competence protein ComM, putative (RefSeq), at 3,443,316 to 3,444,026
_2719
DvMF_2720: DvMF_2720 - phosphatidylserine/phosphatidylglycerophosphate related protein (RefSeq), at 3,444,023 to 3,444,577
_2720
DvMF_2721: DvMF_2721 - hypothetical protein (RefSeq), at 3,444,821 to 3,445,171
_2721
Position (kb)
3443
3444
3445 Strain fitness (log2 ratio)
-2
-1
0
1 at 3442.908 kb on + strand at 3442.916 kb on - strand at 3442.916 kb on - strand at 3443.033 kb on - strand at 3443.122 kb on - strand at 3443.172 kb on + strand at 3443.343 kb on - strand at 3443.350 kb on + strand at 3443.396 kb on + strand, within DvMF_2719 at 3443.396 kb on + strand, within DvMF_2719 at 3443.485 kb on + strand, within DvMF_2719 at 3443.684 kb on + strand, within DvMF_2719 at 3443.785 kb on - strand, within DvMF_2719 at 3443.882 kb on + strand, within DvMF_2719 at 3443.890 kb on - strand, within DvMF_2719 at 3444.095 kb on + strand, within DvMF_2720 at 3444.109 kb on - strand, within DvMF_2720 at 3444.116 kb on - strand, within DvMF_2720 at 3444.209 kb on + strand, within DvMF_2720 at 3444.209 kb on + strand, within DvMF_2720 at 3444.387 kb on + strand, within DvMF_2720 at 3444.388 kb on - strand, within DvMF_2720
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Sisomicin 0.03125 mg/ml remove 3,442,908 + -0.5 3,442,916 - +0.5 3,442,916 - -0.7 3,443,033 - -2.6 3,443,122 - -0.4 3,443,172 + -0.2 3,443,343 - -0.6 3,443,350 + -0.1 3,443,396 + DvMF_2719 0.11 -0.9 3,443,396 + DvMF_2719 0.11 -0.6 3,443,485 + DvMF_2719 0.24 -2.4 3,443,684 + DvMF_2719 0.52 -0.1 3,443,785 - DvMF_2719 0.66 -0.8 3,443,882 + DvMF_2719 0.80 +0.1 3,443,890 - DvMF_2719 0.81 -0.3 3,444,095 + DvMF_2720 0.13 +0.7 3,444,109 - DvMF_2720 0.15 -1.0 3,444,116 - DvMF_2720 0.17 -0.5 3,444,209 + DvMF_2720 0.34 +0.6 3,444,209 + DvMF_2720 0.34 -0.3 3,444,387 + DvMF_2720 0.66 -0.1 3,444,388 - DvMF_2720 0.66 -0.6
Or see this region's nucleotide sequence