Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2715
Experiment: MoYLS4 with Sisomicin 0.03125 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Sisomicin 0.03125 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 3,437,234 | - | DvMF_2714 | 0.51 | -0.6 | |
| 3,437,323 | - | DvMF_2714 | 0.60 | -0.7 | |
| 3,437,463 | + | DvMF_2714 | 0.75 | -0.7 | |
| 3,437,495 | + | DvMF_2714 | 0.78 | +0.0 | |
| 3,437,528 | - | DvMF_2714 | 0.81 | -2.0 | |
| 3,437,544 | - | DvMF_2714 | 0.83 | -0.0 | |
| 3,437,544 | - | DvMF_2714 | 0.83 | -2.1 | |
| 3,437,833 | + | -0.7 | |||
| 3,437,937 | + | -1.0 | |||
| 3,437,937 | + | +1.2 | |||
| 3,438,103 | + | -0.1 | |||
| 3,438,253 | + | DvMF_2715 | 0.18 | +0.6 | |
| 3,438,314 | + | DvMF_2715 | 0.36 | +0.4 | |
| 3,438,411 | + | DvMF_2715 | 0.66 | -0.9 | |
| 3,438,836 | - | -0.6 | |||
| 3,438,880 | - | +0.2 | |||
| 3,438,933 | + | -2.5 | |||
| 3,438,941 | - | -0.0 | |||
| 3,438,982 | + | -2.0 | |||
| 3,438,995 | - | -0.5 | |||
| 3,439,032 | + | -1.0 | |||
| 3,439,097 | + | DvMF_2716 | 0.13 | -1.1 | |
| 3,439,231 | - | DvMF_2716 | 0.55 | -0.6 | |
| 3,439,317 | + | DvMF_2716 | 0.82 | -1.2 |
Or see this region's nucleotide sequence