Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2708
Experiment: MoYLS4 with Sisomicin 0.03125 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Sisomicin 0.03125 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 3,426,746 | + | DvMF_2707 | 0.66 | -2.0 | |
| 3,426,850 | - | DvMF_2707 | 0.71 | -1.2 | |
| 3,427,391 | + | -2.0 | |||
| 3,427,714 | + | DvMF_2708 | 0.13 | -3.7 | |
| 3,427,898 | - | DvMF_2708 | 0.27 | -2.3 | |
| 3,428,003 | + | DvMF_2708 | 0.36 | -1.0 | |
| 3,428,011 | - | DvMF_2708 | 0.36 | -1.3 | |
| 3,428,045 | + | DvMF_2708 | 0.39 | -2.0 | |
| 3,428,230 | - | DvMF_2708 | 0.54 | -3.2 | |
| 3,428,391 | - | DvMF_2708 | 0.67 | -2.7 | |
| 3,428,391 | - | DvMF_2708 | 0.67 | -1.0 | |
| 3,428,447 | - | DvMF_2708 | 0.72 | -4.5 | |
| 3,428,452 | - | DvMF_2708 | 0.72 | -2.0 | |
| 3,428,528 | + | DvMF_2708 | 0.78 | +0.7 | |
| 3,428,606 | - | DvMF_2708 | 0.84 | -0.5 | |
| 3,428,748 | - | -0.2 | |||
| 3,429,035 | - | DvMF_2709 | 0.18 | -0.7 | |
| 3,429,118 | - | DvMF_2709 | 0.29 | -0.8 | |
| 3,429,582 | - | DvMF_2709 | 0.89 | -0.2 | |
| 3,429,646 | + | +0.7 | |||
| 3,429,736 | - | +0.4 |
Or see this region's nucleotide sequence