Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2455
Experiment: MoYLS4 with Sisomicin 0.03125 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Sisomicin 0.03125 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,097,509 | - | DvMF_2454 | 0.66 | +0.4 | |
3,097,938 | + | DvMF_2454 | 0.87 | +0.6 | |
3,098,000 | + | +1.7 | |||
3,098,046 | - | +1.2 | |||
3,098,433 | - | DvMF_2455 | 0.19 | -1.1 | |
3,098,613 | + | DvMF_2455 | 0.59 | -0.6 | |
3,098,676 | - | DvMF_2455 | 0.73 | -2.5 | |
3,098,788 | + | +0.1 | |||
3,098,808 | + | -1.2 | |||
3,099,121 | - | DvMF_2456 | 0.21 | -1.0 | |
3,099,219 | - | DvMF_2456 | 0.34 | -2.8 | |
3,099,404 | + | DvMF_2456 | 0.58 | -0.4 | |
3,099,412 | - | DvMF_2456 | 0.59 | -1.4 | |
3,099,493 | - | DvMF_2456 | 0.69 | -0.4 | |
3,099,530 | - | DvMF_2456 | 0.74 | -0.2 | |
3,099,537 | + | DvMF_2456 | 0.75 | -2.5 | |
3,099,545 | - | DvMF_2456 | 0.76 | -0.5 | |
3,099,560 | - | DvMF_2456 | 0.78 | -0.7 |
Or see this region's nucleotide sequence