Experiment: MoYLS4 with Sisomicin 0.03125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2391 and DvMF_2392 are separated by 138 nucleotides DvMF_2392 and DvMF_2393 are separated by 155 nucleotides DvMF_2393 and DvMF_2394 are separated by 571 nucleotides
DvMF_2391: DvMF_2391 - Arsenical resistance operon trans-acting repressor ArsD (RefSeq), at 3,024,185 to 3,024,508
_2391
DvMF_2392: DvMF_2392 - transcriptional regulator, ArsR family (RefSeq), at 3,024,647 to 3,025,000
_2392
DvMF_2393: DvMF_2393 - hypothetical protein (RefSeq), at 3,025,156 to 3,025,932
_2393
DvMF_2394: DvMF_2394 - hypothetical protein (RefSeq), at 3,026,504 to 3,026,854
_2394
Position (kb)
3025
3026 Strain fitness (log2 ratio)
-2
-1
0
1 at 3024.366 kb on + strand, within DvMF_2391 at 3024.366 kb on + strand, within DvMF_2391 at 3024.374 kb on - strand, within DvMF_2391 at 3024.622 kb on + strand at 3024.915 kb on - strand, within DvMF_2392 at 3024.954 kb on + strand, within DvMF_2392 at 3025.059 kb on + strand at 3025.067 kb on - strand at 3025.204 kb on + strand at 3025.235 kb on + strand, within DvMF_2393 at 3025.243 kb on - strand, within DvMF_2393 at 3025.470 kb on - strand, within DvMF_2393 at 3025.470 kb on - strand, within DvMF_2393 at 3025.613 kb on + strand, within DvMF_2393 at 3025.950 kb on + strand at 3026.006 kb on + strand at 3026.079 kb on - strand at 3026.403 kb on + strand at 3026.439 kb on - strand at 3026.564 kb on - strand, within DvMF_2394 at 3026.581 kb on + strand, within DvMF_2394 at 3026.581 kb on + strand, within DvMF_2394 at 3026.581 kb on + strand, within DvMF_2394 at 3026.716 kb on - strand, within DvMF_2394
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Sisomicin 0.03125 mg/ml remove 3,024,366 + DvMF_2391 0.56 -0.9 3,024,366 + DvMF_2391 0.56 -0.6 3,024,374 - DvMF_2391 0.58 -0.7 3,024,622 + -0.3 3,024,915 - DvMF_2392 0.76 +1.2 3,024,954 + DvMF_2392 0.87 -1.6 3,025,059 + -0.6 3,025,067 - -0.4 3,025,204 + -0.5 3,025,235 + DvMF_2393 0.10 -0.8 3,025,243 - DvMF_2393 0.11 -0.3 3,025,470 - DvMF_2393 0.40 +0.7 3,025,470 - DvMF_2393 0.40 +0.1 3,025,613 + DvMF_2393 0.59 -2.7 3,025,950 + -0.8 3,026,006 + -1.0 3,026,079 - -0.2 3,026,403 + -0.3 3,026,439 - +0.5 3,026,564 - DvMF_2394 0.17 +0.8 3,026,581 + DvMF_2394 0.22 -0.2 3,026,581 + DvMF_2394 0.22 -0.1 3,026,581 + DvMF_2394 0.22 -0.5 3,026,716 - DvMF_2394 0.60 -0.2
Or see this region's nucleotide sequence