Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1947
Experiment: MoYLS4 with Sisomicin 0.03125 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Sisomicin 0.03125 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,403,701 | - | -1.3 | |||
2,403,902 | + | DvMF_1946 | 0.23 | +0.0 | |
2,403,917 | + | DvMF_1946 | 0.26 | -0.0 | |
2,404,014 | + | DvMF_1946 | 0.42 | +0.4 | |
2,404,026 | + | DvMF_1946 | 0.44 | -1.3 | |
2,404,071 | + | DvMF_1946 | 0.51 | +0.1 | |
2,404,074 | - | DvMF_1946 | 0.52 | -0.1 | |
2,404,212 | - | DvMF_1946 | 0.75 | +1.1 | |
2,404,369 | + | -0.6 | |||
2,404,666 | + | -0.3 | |||
2,404,746 | + | -0.4 | |||
2,405,052 | + | DvMF_1947 | 0.25 | -0.4 | |
2,405,052 | + | DvMF_1947 | 0.25 | -1.2 | |
2,405,390 | + | DvMF_1947 | 0.42 | -0.7 | |
2,405,398 | - | DvMF_1947 | 0.43 | +0.3 | |
2,405,483 | - | DvMF_1947 | 0.47 | -0.8 | |
2,405,557 | + | DvMF_1947 | 0.51 | +0.0 | |
2,405,557 | + | DvMF_1947 | 0.51 | +1.0 | |
2,405,573 | + | DvMF_1947 | 0.52 | -2.2 | |
2,405,713 | - | DvMF_1947 | 0.59 | -0.9 | |
2,405,786 | - | DvMF_1947 | 0.62 | +1.1 | |
2,405,896 | - | DvMF_1947 | 0.68 | +1.3 | |
2,405,898 | + | DvMF_1947 | 0.68 | -0.0 | |
2,405,918 | - | DvMF_1947 | 0.69 | -0.9 | |
2,406,056 | - | DvMF_1947 | 0.76 | -0.0 | |
2,406,122 | + | DvMF_1947 | 0.79 | -0.3 | |
2,406,437 | + | -0.7 | |||
2,406,484 | + | -0.4 | |||
2,406,943 | - | -0.6 | |||
2,407,022 | - | +0.2 | |||
2,407,135 | + | +0.4 | |||
2,407,135 | + | +0.1 | |||
2,407,411 | + | -0.5 | |||
2,407,463 | + | -0.6 |
Or see this region's nucleotide sequence