Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1614
Experiment: MoYLS4 with Sisomicin 0.03125 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Sisomicin 0.03125 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,988,478 | + | DvMF_1613 | 0.59 | -0.8 | |
1,988,763 | - | DvMF_1613 | 0.77 | +0.4 | |
1,988,816 | + | DvMF_1613 | 0.80 | +1.0 | |
1,988,857 | + | DvMF_1613 | 0.82 | +0.1 | |
1,988,907 | + | DvMF_1613 | 0.86 | -0.3 | |
1,988,965 | - | DvMF_1613 | 0.89 | -1.5 | |
1,988,992 | - | -1.5 | |||
1,989,088 | + | -0.5 | |||
1,989,415 | + | -0.4 | |||
1,989,578 | - | DvMF_1614 | 0.19 | -2.0 | |
1,989,745 | + | DvMF_1614 | 0.34 | -1.1 | |
1,989,881 | + | DvMF_1614 | 0.46 | -0.8 | |
1,989,893 | + | DvMF_1614 | 0.47 | +0.2 | |
1,989,912 | + | DvMF_1614 | 0.49 | +0.4 | |
1,989,920 | - | DvMF_1614 | 0.50 | -1.1 | |
1,990,244 | + | DvMF_1614 | 0.79 | -1.4 | |
1,990,315 | - | DvMF_1614 | 0.86 | -0.1 | |
1,990,385 | - | -0.7 | |||
1,990,402 | - | -0.4 | |||
1,990,440 | + | -0.6 | |||
1,990,473 | - | -0.7 | |||
1,990,495 | + | +0.1 | |||
1,990,495 | - | -0.8 | |||
1,990,535 | - | -1.3 | |||
1,991,034 | - | DvMF_1615 | 0.64 | -1.2 | |
1,991,365 | + | -0.8 |
Or see this region's nucleotide sequence