Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1436
Experiment: MoYLS4 with Sisomicin 0.03125 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Sisomicin 0.03125 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,757,567 | - | +0.1 | |||
1,757,605 | + | -1.2 | |||
1,757,630 | - | -1.6 | |||
1,757,834 | - | DvMF_1435 | 0.54 | -0.7 | |
1,757,894 | + | DvMF_1435 | 0.67 | -0.6 | |
1,758,077 | - | -1.0 | |||
1,758,077 | - | -1.1 | |||
1,758,160 | + | -0.6 | |||
1,758,243 | + | -2.2 | |||
1,758,274 | - | -0.8 | |||
1,758,388 | + | -0.9 | |||
1,758,513 | + | DvMF_1436 | 0.19 | -0.9 | |
1,758,622 | - | DvMF_1436 | 0.31 | -0.7 | |
1,758,626 | - | DvMF_1436 | 0.32 | -0.1 | |
1,758,633 | + | DvMF_1436 | 0.32 | -0.4 | |
1,758,641 | - | DvMF_1436 | 0.33 | -0.1 | |
1,758,684 | - | DvMF_1436 | 0.38 | +0.3 | |
1,758,819 | - | DvMF_1436 | 0.53 | -0.4 | |
1,758,835 | + | DvMF_1436 | 0.55 | -0.8 | |
1,759,054 | + | DvMF_1436 | 0.80 | +0.2 | |
1,759,096 | - | DvMF_1436 | 0.85 | -1.2 | |
1,759,213 | - | -1.8 | |||
1,759,396 | + | -0.0 | |||
1,759,548 | + | DvMF_1437 | 0.22 | -1.2 | |
1,759,552 | - | DvMF_1437 | 0.23 | -0.5 | |
1,760,007 | - | -0.6 | |||
1,760,033 | - | -0.7 | |||
1,760,033 | - | +0.1 | |||
1,760,191 | + | DvMF_1438 | 0.28 | +0.2 | |
1,760,199 | - | DvMF_1438 | 0.29 | +0.1 |
Or see this region's nucleotide sequence