Experiment: MoYLS4 with Sisomicin 0.03125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0624 and DvMF_0625 are separated by 13 nucleotides DvMF_0625 and DvMF_0626 are separated by 77 nucleotides DvMF_0626 and DvMF_0627 are separated by 464 nucleotides
DvMF_0624: DvMF_0624 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase (RefSeq), at 746,056 to 747,297
_0624
DvMF_0625: DvMF_0625 - protein of unknown function DUF1641 (RefSeq), at 747,311 to 748,012
_0625
DvMF_0626: DvMF_0626 - response regulator receiver protein (RefSeq), at 748,090 to 748,476
_0626
DvMF_0627: DvMF_0627 - Sel1 domain protein repeat-containing protein (RefSeq), at 748,941 to 749,627
_0627
Position (kb) 748
749 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 747.142 kb on - strand, within DvMF_0624 at 747.210 kb on - strand at 747.270 kb on + strand at 747.435 kb on + strand, within DvMF_0625 at 747.602 kb on + strand, within DvMF_0625 at 747.621 kb on - strand, within DvMF_0625 at 747.888 kb on + strand, within DvMF_0625 at 747.917 kb on - strand, within DvMF_0625 at 748.190 kb on + strand, within DvMF_0626 at 748.302 kb on + strand, within DvMF_0626 at 748.333 kb on - strand, within DvMF_0626 at 748.333 kb on - strand, within DvMF_0626 at 748.333 kb on - strand, within DvMF_0626 at 748.372 kb on - strand, within DvMF_0626 at 748.470 kb on + strand at 748.523 kb on + strand at 748.602 kb on + strand at 748.602 kb on + strand at 748.610 kb on - strand at 748.754 kb on + strand at 749.167 kb on + strand, within DvMF_0627 at 749.173 kb on + strand, within DvMF_0627 at 749.258 kb on + strand, within DvMF_0627 at 749.353 kb on - strand, within DvMF_0627 at 749.442 kb on + strand, within DvMF_0627
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Sisomicin 0.03125 mg/ml remove 747,142 - DvMF_0624 0.87 -0.8 747,210 - -0.4 747,270 + -0.5 747,435 + DvMF_0625 0.18 -0.6 747,602 + DvMF_0625 0.41 -1.7 747,621 - DvMF_0625 0.44 +0.6 747,888 + DvMF_0625 0.82 -0.1 747,917 - DvMF_0625 0.86 -0.2 748,190 + DvMF_0626 0.26 -1.2 748,302 + DvMF_0626 0.55 -2.1 748,333 - DvMF_0626 0.63 -0.2 748,333 - DvMF_0626 0.63 -0.7 748,333 - DvMF_0626 0.63 -0.7 748,372 - DvMF_0626 0.73 -0.5 748,470 + -1.6 748,523 + -1.3 748,602 + -3.6 748,602 + -0.5 748,610 - -0.7 748,754 + -0.2 749,167 + DvMF_0627 0.33 -0.8 749,173 + DvMF_0627 0.34 -0.6 749,258 + DvMF_0627 0.46 +0.2 749,353 - DvMF_0627 0.60 -0.9 749,442 + DvMF_0627 0.73 -0.4
Or see this region's nucleotide sequence