Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3394 and Ac3H11_3395 are separated by 20 nucleotides Ac3H11_3395 and Ac3H11_3396 are separated by 17 nucleotides Ac3H11_3396 and Ac3H11_3397 are separated by 44 nucleotides Ac3H11_3397 and Ac3H11_3398 are separated by 54 nucleotides
Ac3H11_3394 - hypothetical protein, at 72,622 to 72,789
_3394
Ac3H11_3395 - alpha/beta hydrolase fold, at 72,810 to 73,448
_3395
Ac3H11_3396 - ProQ: influences osmotic activation of compatible solute ProP, at 73,466 to 74,437
_3396
Ac3H11_3397 - Conserved domain protein, at 74,482 to 75,096
_3397
Ac3H11_3398 - Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF, at 75,151 to 76,404
_3398
Position (kb) 73
74
75 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 72.759 kb on - strand, within Ac3H11_3394 at 72.777 kb on + strand at 72.778 kb on - strand at 72.848 kb on + strand at 72.848 kb on + strand at 72.848 kb on + strand at 72.848 kb on + strand at 72.849 kb on - strand at 73.121 kb on + strand, within Ac3H11_3395 at 73.165 kb on + strand, within Ac3H11_3395 at 73.165 kb on + strand, within Ac3H11_3395 at 73.165 kb on + strand, within Ac3H11_3395 at 73.165 kb on + strand, within Ac3H11_3395 at 73.179 kb on + strand, within Ac3H11_3395 at 73.614 kb on + strand, within Ac3H11_3396 at 73.614 kb on + strand, within Ac3H11_3396 at 73.614 kb on + strand, within Ac3H11_3396 at 73.614 kb on + strand, within Ac3H11_3396 at 73.614 kb on + strand, within Ac3H11_3396 at 73.614 kb on + strand, within Ac3H11_3396 at 73.614 kb on + strand, within Ac3H11_3396 at 73.614 kb on + strand, within Ac3H11_3396 at 73.614 kb on + strand, within Ac3H11_3396 at 73.615 kb on - strand, within Ac3H11_3396 at 73.615 kb on - strand, within Ac3H11_3396 at 73.615 kb on - strand, within Ac3H11_3396 at 73.615 kb on - strand, within Ac3H11_3396 at 73.615 kb on - strand, within Ac3H11_3396 at 73.615 kb on - strand, within Ac3H11_3396 at 73.751 kb on + strand, within Ac3H11_3396 at 73.764 kb on + strand, within Ac3H11_3396 at 73.765 kb on - strand, within Ac3H11_3396 at 73.765 kb on - strand, within Ac3H11_3396 at 73.765 kb on - strand, within Ac3H11_3396 at 73.864 kb on - strand, within Ac3H11_3396 at 73.966 kb on - strand, within Ac3H11_3396 at 74.483 kb on + strand at 74.484 kb on - strand at 74.484 kb on - strand at 74.484 kb on - strand at 74.634 kb on - strand, within Ac3H11_3397 at 74.634 kb on - strand, within Ac3H11_3397 at 74.634 kb on - strand, within Ac3H11_3397 at 74.634 kb on - strand, within Ac3H11_3397 at 74.756 kb on + strand, within Ac3H11_3397 at 74.794 kb on + strand, within Ac3H11_3397 at 74.794 kb on + strand, within Ac3H11_3397 at 74.795 kb on - strand, within Ac3H11_3397 at 74.941 kb on + strand, within Ac3H11_3397 at 74.942 kb on - strand, within Ac3H11_3397 at 75.133 kb on - strand at 75.320 kb on + strand, within Ac3H11_3398 at 75.347 kb on + strand, within Ac3H11_3398 at 75.347 kb on + strand, within Ac3H11_3398 at 75.347 kb on + strand, within Ac3H11_3398 at 75.347 kb on + strand, within Ac3H11_3398 at 75.347 kb on + strand, within Ac3H11_3398 at 75.347 kb on + strand, within Ac3H11_3398 at 75.348 kb on - strand, within Ac3H11_3398
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 72,759 - Ac3H11_3394 0.82 +0.1 72,777 + +0.1 72,778 - -1.4 72,848 + -0.5 72,848 + +0.1 72,848 + +0.6 72,848 + +0.9 72,849 - +0.2 73,121 + Ac3H11_3395 0.49 -0.2 73,165 + Ac3H11_3395 0.56 -0.5 73,165 + Ac3H11_3395 0.56 -0.2 73,165 + Ac3H11_3395 0.56 +0.8 73,165 + Ac3H11_3395 0.56 +1.0 73,179 + Ac3H11_3395 0.58 +0.3 73,614 + Ac3H11_3396 0.15 +0.7 73,614 + Ac3H11_3396 0.15 +1.3 73,614 + Ac3H11_3396 0.15 -1.4 73,614 + Ac3H11_3396 0.15 -0.5 73,614 + Ac3H11_3396 0.15 -0.4 73,614 + Ac3H11_3396 0.15 -0.9 73,614 + Ac3H11_3396 0.15 -0.2 73,614 + Ac3H11_3396 0.15 -0.0 73,614 + Ac3H11_3396 0.15 +1.0 73,615 - Ac3H11_3396 0.15 +0.3 73,615 - Ac3H11_3396 0.15 +1.0 73,615 - Ac3H11_3396 0.15 +0.6 73,615 - Ac3H11_3396 0.15 -1.6 73,615 - Ac3H11_3396 0.15 -0.0 73,615 - Ac3H11_3396 0.15 +0.1 73,751 + Ac3H11_3396 0.29 +0.2 73,764 + Ac3H11_3396 0.31 -0.1 73,765 - Ac3H11_3396 0.31 +0.1 73,765 - Ac3H11_3396 0.31 -0.1 73,765 - Ac3H11_3396 0.31 +0.7 73,864 - Ac3H11_3396 0.41 -0.6 73,966 - Ac3H11_3396 0.51 -0.3 74,483 + -0.8 74,484 - +0.4 74,484 - -0.0 74,484 - +0.3 74,634 - Ac3H11_3397 0.25 +0.1 74,634 - Ac3H11_3397 0.25 +1.4 74,634 - Ac3H11_3397 0.25 +0.8 74,634 - Ac3H11_3397 0.25 +0.7 74,756 + Ac3H11_3397 0.45 +0.2 74,794 + Ac3H11_3397 0.51 +0.8 74,794 + Ac3H11_3397 0.51 +0.8 74,795 - Ac3H11_3397 0.51 +0.2 74,941 + Ac3H11_3397 0.75 -1.2 74,942 - Ac3H11_3397 0.75 -0.0 75,133 - -0.6 75,320 + Ac3H11_3398 0.13 -1.4 75,347 + Ac3H11_3398 0.16 -3.2 75,347 + Ac3H11_3398 0.16 -2.1 75,347 + Ac3H11_3398 0.16 -1.9 75,347 + Ac3H11_3398 0.16 -1.7 75,347 + Ac3H11_3398 0.16 -1.8 75,347 + Ac3H11_3398 0.16 -3.3 75,348 - Ac3H11_3398 0.16 -4.1
Or see this region's nucleotide sequence