Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_26485 and AO353_26490 are separated by 4 nucleotides AO353_26490 and AO353_26495 are separated by 46 nucleotides AO353_26495 and AO353_26500 overlap by 4 nucleotides
AO353_26485: AO353_26485 - hypothetical protein, at 5,801,831 to 5,802,097
_26485
AO353_26490: AO353_26490 - hypothetical protein, at 5,802,102 to 5,802,482
_26490
AO353_26495: AO353_26495 - hypothetical protein, at 5,802,529 to 5,802,774
_26495
AO353_26500: AO353_26500 - hypothetical protein, at 5,802,771 to 5,803,517
_26500
Position (kb) 5801
5802
5803 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5800.845 kb on + strand at 5800.846 kb on - strand at 5800.846 kb on - strand at 5800.846 kb on - strand at 5800.870 kb on + strand at 5800.870 kb on + strand at 5800.871 kb on - strand at 5800.881 kb on - strand at 5800.898 kb on - strand at 5800.907 kb on + strand at 5800.907 kb on + strand at 5800.907 kb on + strand at 5800.907 kb on + strand at 5800.907 kb on + strand at 5800.907 kb on + strand at 5800.908 kb on - strand at 5800.908 kb on - strand at 5800.908 kb on - strand at 5800.910 kb on - strand at 5800.934 kb on + strand at 5800.964 kb on + strand at 5800.964 kb on + strand at 5800.988 kb on - strand at 5801.015 kb on - strand at 5801.041 kb on + strand at 5801.061 kb on + strand at 5801.062 kb on - strand at 5801.062 kb on - strand at 5801.232 kb on + strand at 5801.316 kb on - strand at 5801.367 kb on + strand at 5801.367 kb on + strand at 5801.411 kb on + strand at 5801.435 kb on + strand at 5801.435 kb on + strand at 5801.436 kb on - strand at 5801.436 kb on - strand at 5801.460 kb on + strand at 5801.534 kb on - strand at 5801.538 kb on - strand at 5801.552 kb on - strand at 5801.569 kb on - strand at 5801.651 kb on + strand at 5801.683 kb on + strand at 5801.697 kb on - strand at 5801.730 kb on - strand at 5801.744 kb on + strand at 5801.745 kb on - strand at 5801.746 kb on + strand at 5801.746 kb on + strand at 5801.747 kb on - strand at 5801.747 kb on - strand at 5801.771 kb on + strand at 5801.782 kb on - strand at 5801.811 kb on - strand at 5801.859 kb on - strand, within AO353_26485 at 5801.859 kb on - strand, within AO353_26485 at 5801.892 kb on - strand, within AO353_26485 at 5801.917 kb on - strand, within AO353_26485 at 5801.951 kb on + strand, within AO353_26485 at 5801.951 kb on + strand, within AO353_26485 at 5801.951 kb on + strand, within AO353_26485 at 5801.951 kb on + strand, within AO353_26485 at 5801.951 kb on + strand, within AO353_26485 at 5801.951 kb on + strand, within AO353_26485 at 5801.951 kb on + strand, within AO353_26485 at 5801.952 kb on - strand, within AO353_26485 at 5801.952 kb on - strand, within AO353_26485 at 5801.952 kb on - strand, within AO353_26485 at 5801.952 kb on - strand, within AO353_26485 at 5801.952 kb on - strand, within AO353_26485 at 5801.952 kb on - strand, within AO353_26485 at 5801.952 kb on - strand, within AO353_26485 at 5801.952 kb on - strand, within AO353_26485 at 5801.952 kb on - strand, within AO353_26485 at 5802.117 kb on - strand at 5802.189 kb on + strand, within AO353_26490 at 5802.190 kb on - strand, within AO353_26490 at 5802.224 kb on + strand, within AO353_26490 at 5802.224 kb on + strand, within AO353_26490 at 5802.225 kb on - strand, within AO353_26490 at 5802.225 kb on - strand, within AO353_26490 at 5802.240 kb on + strand, within AO353_26490 at 5802.240 kb on + strand, within AO353_26490 at 5802.241 kb on - strand, within AO353_26490 at 5802.280 kb on + strand at 5802.304 kb on + strand, within AO353_26490 at 5802.304 kb on + strand, within AO353_26490 at 5802.304 kb on + strand, within AO353_26490 at 5802.305 kb on - strand, within AO353_26490 at 5802.372 kb on + strand, within AO353_26490 at 5802.372 kb on + strand, within AO353_26490 at 5802.372 kb on + strand, within AO353_26490 at 5802.372 kb on + strand, within AO353_26490 at 5802.372 kb on + strand, within AO353_26490 at 5802.372 kb on + strand, within AO353_26490 at 5802.372 kb on + strand, within AO353_26490 at 5802.372 kb on + strand, within AO353_26490 at 5802.372 kb on + strand, within AO353_26490 at 5802.372 kb on + strand, within AO353_26490 at 5802.372 kb on + strand, within AO353_26490 at 5802.372 kb on + strand, within AO353_26490 at 5802.372 kb on + strand, within AO353_26490 at 5802.372 kb on + strand, within AO353_26490 at 5802.372 kb on + strand, within AO353_26490 at 5802.372 kb on + strand, within AO353_26490 at 5802.372 kb on + strand, within AO353_26490 at 5802.373 kb on - strand at 5802.373 kb on - strand, within AO353_26490 at 5802.373 kb on - strand, within AO353_26490 at 5802.373 kb on - strand, within AO353_26490 at 5802.373 kb on - strand, within AO353_26490 at 5802.373 kb on - strand, within AO353_26490 at 5802.373 kb on - strand, within AO353_26490 at 5802.373 kb on - strand, within AO353_26490 at 5802.373 kb on - strand, within AO353_26490 at 5802.373 kb on - strand, within AO353_26490 at 5802.373 kb on - strand, within AO353_26490 at 5802.373 kb on - strand, within AO353_26490 at 5802.494 kb on + strand at 5802.494 kb on + strand at 5802.494 kb on + strand at 5802.494 kb on + strand at 5802.494 kb on + strand at 5802.494 kb on + strand at 5802.494 kb on + strand at 5802.494 kb on + strand at 5802.494 kb on + strand at 5802.494 kb on + strand at 5802.494 kb on + strand at 5802.495 kb on - strand at 5802.495 kb on - strand at 5802.495 kb on - strand at 5802.495 kb on - strand at 5802.495 kb on - strand at 5802.497 kb on - strand at 5802.497 kb on - strand at 5802.512 kb on + strand at 5802.512 kb on + strand at 5802.512 kb on + strand at 5802.513 kb on - strand at 5802.513 kb on - strand at 5802.513 kb on - strand at 5802.513 kb on - strand at 5802.534 kb on + strand at 5802.534 kb on + strand at 5802.534 kb on + strand at 5802.534 kb on + strand at 5802.534 kb on + strand at 5802.535 kb on - strand at 5802.535 kb on - strand at 5802.535 kb on - strand at 5802.535 kb on - strand at 5802.535 kb on - strand at 5802.535 kb on - strand at 5802.539 kb on - strand at 5802.589 kb on + strand, within AO353_26495 at 5802.589 kb on + strand, within AO353_26495 at 5802.589 kb on + strand, within AO353_26495 at 5802.590 kb on - strand, within AO353_26495 at 5802.781 kb on - strand at 5802.854 kb on + strand, within AO353_26500 at 5802.855 kb on - strand, within AO353_26500 at 5802.970 kb on - strand, within AO353_26500 at 5803.064 kb on - strand, within AO353_26500
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 5,800,845 + +2.3 5,800,846 - +0.8 5,800,846 - -2.0 5,800,846 - -2.0 5,800,870 + +0.9 5,800,870 + +0.3 5,800,871 - -0.8 5,800,881 - -1.1 5,800,898 - +0.2 5,800,907 + -2.0 5,800,907 + +0.2 5,800,907 + +1.2 5,800,907 + +0.4 5,800,907 + -0.4 5,800,907 + +2.2 5,800,908 - -1.0 5,800,908 - +0.4 5,800,908 - +1.6 5,800,910 - +0.9 5,800,934 + +1.0 5,800,964 + -0.4 5,800,964 + +0.6 5,800,988 - +1.6 5,801,015 - -0.4 5,801,041 + +0.0 5,801,061 + +0.4 5,801,062 - +2.2 5,801,062 - +0.3 5,801,232 + -0.8 5,801,316 - -0.1 5,801,367 + -2.0 5,801,367 + -0.4 5,801,411 + +1.2 5,801,435 + +2.2 5,801,435 + +2.4 5,801,436 - +0.6 5,801,436 - +0.2 5,801,460 + +0.6 5,801,534 - -0.4 5,801,538 - -1.8 5,801,552 - +0.6 5,801,569 - +0.2 5,801,651 + -2.7 5,801,683 + -0.4 5,801,697 - +0.3 5,801,730 - +1.7 5,801,744 + +1.0 5,801,745 - -1.1 5,801,746 + -1.7 5,801,746 + -1.1 5,801,747 - -2.0 5,801,747 - -1.4 5,801,771 + -0.6 5,801,782 - -1.1 5,801,811 - -1.2 5,801,859 - AO353_26485 0.10 -2.0 5,801,859 - AO353_26485 0.10 -0.4 5,801,892 - AO353_26485 0.23 -1.0 5,801,917 - AO353_26485 0.32 -1.4 5,801,951 + AO353_26485 0.45 +1.4 5,801,951 + AO353_26485 0.45 +0.0 5,801,951 + AO353_26485 0.45 -0.1 5,801,951 + AO353_26485 0.45 -0.8 5,801,951 + AO353_26485 0.45 -1.0 5,801,951 + AO353_26485 0.45 -2.4 5,801,951 + AO353_26485 0.45 +1.8 5,801,952 - AO353_26485 0.45 -0.4 5,801,952 - AO353_26485 0.45 -0.4 5,801,952 - AO353_26485 0.45 -1.0 5,801,952 - AO353_26485 0.45 -0.4 5,801,952 - AO353_26485 0.45 -1.1 5,801,952 - AO353_26485 0.45 +0.9 5,801,952 - AO353_26485 0.45 -0.4 5,801,952 - AO353_26485 0.45 -0.4 5,801,952 - AO353_26485 0.45 -0.4 5,802,117 - +1.9 5,802,189 + AO353_26490 0.23 -0.7 5,802,190 - AO353_26490 0.23 +0.6 5,802,224 + AO353_26490 0.32 -0.4 5,802,224 + AO353_26490 0.32 -0.4 5,802,225 - AO353_26490 0.32 +0.9 5,802,225 - AO353_26490 0.32 +0.4 5,802,240 + AO353_26490 0.36 +1.6 5,802,240 + AO353_26490 0.36 +1.2 5,802,241 - AO353_26490 0.36 -0.4 5,802,280 + +0.9 5,802,304 + AO353_26490 0.53 -0.1 5,802,304 + AO353_26490 0.53 -0.4 5,802,304 + AO353_26490 0.53 -1.0 5,802,305 - AO353_26490 0.53 +0.5 5,802,372 + AO353_26490 0.71 -0.4 5,802,372 + AO353_26490 0.71 -0.2 5,802,372 + AO353_26490 0.71 -0.9 5,802,372 + AO353_26490 0.71 +0.8 5,802,372 + AO353_26490 0.71 +1.6 5,802,372 + AO353_26490 0.71 +0.9 5,802,372 + AO353_26490 0.71 -1.0 5,802,372 + AO353_26490 0.71 -1.4 5,802,372 + AO353_26490 0.71 -2.0 5,802,372 + AO353_26490 0.71 +0.6 5,802,372 + AO353_26490 0.71 +0.6 5,802,372 + AO353_26490 0.71 +0.6 5,802,372 + AO353_26490 0.71 -1.4 5,802,372 + AO353_26490 0.71 +1.2 5,802,372 + AO353_26490 0.71 +0.2 5,802,372 + AO353_26490 0.71 -0.2 5,802,372 + AO353_26490 0.71 +1.6 5,802,373 - +1.2 5,802,373 - AO353_26490 0.71 +0.3 5,802,373 - AO353_26490 0.71 -1.4 5,802,373 - AO353_26490 0.71 +0.6 5,802,373 - AO353_26490 0.71 -1.6 5,802,373 - AO353_26490 0.71 +0.2 5,802,373 - AO353_26490 0.71 -0.4 5,802,373 - AO353_26490 0.71 +1.2 5,802,373 - AO353_26490 0.71 -1.0 5,802,373 - AO353_26490 0.71 -0.1 5,802,373 - AO353_26490 0.71 -1.4 5,802,373 - AO353_26490 0.71 +1.2 5,802,494 + +0.0 5,802,494 + +1.0 5,802,494 + +1.2 5,802,494 + +1.9 5,802,494 + -1.1 5,802,494 + -0.4 5,802,494 + -2.0 5,802,494 + -0.4 5,802,494 + -0.4 5,802,494 + -0.1 5,802,494 + -0.4 5,802,495 - -0.4 5,802,495 - -0.4 5,802,495 - -1.4 5,802,495 - +1.6 5,802,495 - +0.0 5,802,497 - +0.2 5,802,497 - -1.1 5,802,512 + -0.4 5,802,512 + -2.0 5,802,512 + -2.7 5,802,513 - -0.4 5,802,513 - +0.7 5,802,513 - -1.4 5,802,513 - -0.1 5,802,534 + +2.2 5,802,534 + -0.8 5,802,534 + -0.0 5,802,534 + +0.3 5,802,534 + -0.4 5,802,535 - -0.8 5,802,535 - -0.4 5,802,535 - +0.6 5,802,535 - +2.2 5,802,535 - -0.4 5,802,535 - +1.4 5,802,539 - -0.4 5,802,589 + AO353_26495 0.24 -3.4 5,802,589 + AO353_26495 0.24 -1.0 5,802,589 + AO353_26495 0.24 +1.2 5,802,590 - AO353_26495 0.25 +0.2 5,802,781 - +0.5 5,802,854 + AO353_26500 0.11 +0.6 5,802,855 - AO353_26500 0.11 +0.7 5,802,970 - AO353_26500 0.27 +0.9 5,803,064 - AO353_26500 0.39 +1.2
Or see this region's nucleotide sequence