Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_23090 and AO353_23095 are separated by 176 nucleotides AO353_23095 and AO353_23100 are separated by 77 nucleotides AO353_23100 and AO353_23105 are separated by 70 nucleotides
AO353_23090: AO353_23090 - LysR family transcriptional regulator, at 5,068,112 to 5,069,005
_23090
AO353_23095: AO353_23095 - hydrolase, at 5,069,182 to 5,069,826
_23095
AO353_23100: AO353_23100 - antibiotic biosynthesis monooxygenase, at 5,069,904 to 5,070,479
_23100
AO353_23105: AO353_23105 - dienelactone hydrolase, at 5,070,550 to 5,071,437
_23105
Position (kb)
5069
5070
5071 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 5069.072 kb on + strand at 5069.072 kb on + strand at 5069.077 kb on + strand at 5069.078 kb on - strand at 5069.078 kb on - strand at 5069.078 kb on - strand at 5069.078 kb on - strand at 5069.078 kb on - strand at 5069.078 kb on - strand at 5069.078 kb on - strand at 5069.078 kb on - strand at 5069.132 kb on - strand at 5069.132 kb on - strand at 5069.149 kb on + strand at 5069.150 kb on - strand at 5069.150 kb on - strand at 5069.150 kb on - strand at 5069.187 kb on + strand at 5069.187 kb on + strand at 5069.188 kb on - strand at 5069.188 kb on - strand at 5069.188 kb on - strand at 5069.188 kb on - strand at 5069.377 kb on + strand, within AO353_23095 at 5069.377 kb on + strand, within AO353_23095 at 5069.377 kb on + strand, within AO353_23095 at 5069.377 kb on + strand, within AO353_23095 at 5069.397 kb on + strand, within AO353_23095 at 5069.398 kb on - strand, within AO353_23095 at 5069.398 kb on - strand, within AO353_23095 at 5069.455 kb on - strand, within AO353_23095 at 5069.455 kb on - strand, within AO353_23095 at 5069.465 kb on + strand, within AO353_23095 at 5069.465 kb on + strand, within AO353_23095 at 5069.575 kb on + strand, within AO353_23095 at 5069.575 kb on + strand, within AO353_23095 at 5069.575 kb on + strand, within AO353_23095 at 5069.575 kb on + strand, within AO353_23095 at 5069.575 kb on + strand, within AO353_23095 at 5069.575 kb on + strand, within AO353_23095 at 5069.575 kb on + strand, within AO353_23095 at 5069.575 kb on + strand, within AO353_23095 at 5069.575 kb on + strand, within AO353_23095 at 5069.575 kb on + strand, within AO353_23095 at 5069.575 kb on + strand, within AO353_23095 at 5069.575 kb on + strand, within AO353_23095 at 5069.576 kb on - strand, within AO353_23095 at 5069.576 kb on - strand, within AO353_23095 at 5069.576 kb on - strand, within AO353_23095 at 5069.576 kb on - strand, within AO353_23095 at 5069.689 kb on + strand, within AO353_23095 at 5069.690 kb on - strand, within AO353_23095 at 5069.719 kb on + strand, within AO353_23095 at 5069.719 kb on + strand, within AO353_23095 at 5069.719 kb on + strand, within AO353_23095 at 5069.720 kb on - strand, within AO353_23095 at 5069.720 kb on - strand, within AO353_23095 at 5069.720 kb on - strand, within AO353_23095 at 5069.720 kb on - strand, within AO353_23095 at 5069.720 kb on - strand, within AO353_23095 at 5069.720 kb on - strand, within AO353_23095 at 5069.780 kb on - strand at 5069.785 kb on + strand at 5069.786 kb on - strand at 5069.786 kb on - strand at 5069.839 kb on - strand at 5069.979 kb on + strand, within AO353_23100 at 5069.979 kb on + strand, within AO353_23100 at 5069.980 kb on - strand, within AO353_23100 at 5070.022 kb on - strand at 5070.022 kb on - strand, within AO353_23100 at 5070.154 kb on + strand, within AO353_23100 at 5070.154 kb on + strand, within AO353_23100 at 5070.154 kb on + strand, within AO353_23100 at 5070.154 kb on + strand, within AO353_23100 at 5070.155 kb on - strand, within AO353_23100 at 5070.224 kb on + strand, within AO353_23100 at 5070.224 kb on + strand, within AO353_23100 at 5070.225 kb on - strand, within AO353_23100 at 5070.363 kb on + strand, within AO353_23100 at 5070.363 kb on + strand, within AO353_23100 at 5070.414 kb on + strand, within AO353_23100 at 5070.415 kb on - strand at 5070.415 kb on - strand, within AO353_23100 at 5070.415 kb on - strand, within AO353_23100 at 5070.415 kb on - strand, within AO353_23100 at 5070.415 kb on - strand, within AO353_23100 at 5070.415 kb on - strand, within AO353_23100 at 5070.551 kb on + strand at 5070.662 kb on + strand, within AO353_23105 at 5070.668 kb on + strand, within AO353_23105 at 5070.668 kb on + strand, within AO353_23105 at 5070.668 kb on + strand, within AO353_23105 at 5070.669 kb on - strand, within AO353_23105 at 5070.669 kb on - strand, within AO353_23105 at 5070.669 kb on - strand, within AO353_23105 at 5070.669 kb on - strand, within AO353_23105 at 5070.669 kb on - strand, within AO353_23105 at 5070.669 kb on - strand, within AO353_23105 at 5070.677 kb on + strand, within AO353_23105 at 5070.677 kb on + strand, within AO353_23105 at 5070.753 kb on - strand, within AO353_23105 at 5070.753 kb on - strand, within AO353_23105 at 5070.760 kb on + strand, within AO353_23105 at 5070.760 kb on + strand, within AO353_23105 at 5070.761 kb on - strand, within AO353_23105 at 5070.761 kb on - strand, within AO353_23105 at 5070.812 kb on + strand, within AO353_23105 at 5070.812 kb on + strand, within AO353_23105 at 5070.813 kb on - strand, within AO353_23105 at 5070.813 kb on - strand, within AO353_23105 at 5070.813 kb on - strand at 5070.878 kb on + strand, within AO353_23105 at 5071.101 kb on - strand, within AO353_23105 at 5071.214 kb on + strand, within AO353_23105 at 5071.214 kb on + strand, within AO353_23105 at 5071.224 kb on - strand, within AO353_23105 at 5071.274 kb on + strand, within AO353_23105 at 5071.274 kb on + strand, within AO353_23105 at 5071.274 kb on + strand, within AO353_23105 at 5071.274 kb on + strand, within AO353_23105 at 5071.275 kb on - strand, within AO353_23105 at 5071.275 kb on - strand, within AO353_23105 at 5071.322 kb on - strand, within AO353_23105 at 5071.322 kb on - strand, within AO353_23105 at 5071.379 kb on + strand at 5071.379 kb on + strand at 5071.380 kb on - strand at 5071.380 kb on - strand at 5071.382 kb on + strand at 5071.382 kb on + strand at 5071.382 kb on + strand at 5071.382 kb on + strand at 5071.383 kb on - strand at 5071.383 kb on - strand at 5071.425 kb on + strand at 5071.425 kb on + strand at 5071.426 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 5,069,072 + -0.4 5,069,072 + +0.6 5,069,077 + -0.7 5,069,078 - +1.3 5,069,078 - -0.4 5,069,078 - -1.1 5,069,078 - +0.6 5,069,078 - -1.2 5,069,078 - +2.2 5,069,078 - -0.1 5,069,078 - +1.2 5,069,132 - +0.3 5,069,132 - -0.7 5,069,149 + -0.4 5,069,150 - +0.1 5,069,150 - -0.4 5,069,150 - +0.1 5,069,187 + +2.1 5,069,187 + +2.2 5,069,188 - -0.7 5,069,188 - +1.6 5,069,188 - -0.4 5,069,188 - +2.9 5,069,377 + AO353_23095 0.30 -2.4 5,069,377 + AO353_23095 0.30 +0.8 5,069,377 + AO353_23095 0.30 -0.4 5,069,377 + AO353_23095 0.30 -0.8 5,069,397 + AO353_23095 0.33 +2.1 5,069,398 - AO353_23095 0.33 -1.0 5,069,398 - AO353_23095 0.33 +0.2 5,069,455 - AO353_23095 0.42 -0.4 5,069,455 - AO353_23095 0.42 +0.6 5,069,465 + AO353_23095 0.44 +1.7 5,069,465 + AO353_23095 0.44 +0.8 5,069,575 + AO353_23095 0.61 +0.6 5,069,575 + AO353_23095 0.61 +0.9 5,069,575 + AO353_23095 0.61 -0.4 5,069,575 + AO353_23095 0.61 +2.2 5,069,575 + AO353_23095 0.61 -0.4 5,069,575 + AO353_23095 0.61 -0.8 5,069,575 + AO353_23095 0.61 -1.0 5,069,575 + AO353_23095 0.61 -0.4 5,069,575 + AO353_23095 0.61 -2.0 5,069,575 + AO353_23095 0.61 +2.1 5,069,575 + AO353_23095 0.61 -0.4 5,069,575 + AO353_23095 0.61 +2.4 5,069,576 - AO353_23095 0.61 +0.3 5,069,576 - AO353_23095 0.61 +1.4 5,069,576 - AO353_23095 0.61 -1.4 5,069,576 - AO353_23095 0.61 +1.2 5,069,689 + AO353_23095 0.79 -0.4 5,069,690 - AO353_23095 0.79 +0.9 5,069,719 + AO353_23095 0.83 +1.6 5,069,719 + AO353_23095 0.83 -0.4 5,069,719 + AO353_23095 0.83 -1.0 5,069,720 - AO353_23095 0.83 +0.9 5,069,720 - AO353_23095 0.83 -0.8 5,069,720 - AO353_23095 0.83 -2.0 5,069,720 - AO353_23095 0.83 -0.4 5,069,720 - AO353_23095 0.83 -1.0 5,069,720 - AO353_23095 0.83 -1.4 5,069,780 - -2.4 5,069,785 + -0.4 5,069,786 - -0.4 5,069,786 - -0.4 5,069,839 - -1.4 5,069,979 + AO353_23100 0.13 +0.6 5,069,979 + AO353_23100 0.13 +1.6 5,069,980 - AO353_23100 0.13 -1.4 5,070,022 - -1.4 5,070,022 - AO353_23100 0.20 -2.0 5,070,154 + AO353_23100 0.43 +0.6 5,070,154 + AO353_23100 0.43 +1.8 5,070,154 + AO353_23100 0.43 +0.8 5,070,154 + AO353_23100 0.43 -0.6 5,070,155 - AO353_23100 0.44 -0.4 5,070,224 + AO353_23100 0.56 +1.2 5,070,224 + AO353_23100 0.56 +0.0 5,070,225 - AO353_23100 0.56 +0.0 5,070,363 + AO353_23100 0.80 +1.2 5,070,363 + AO353_23100 0.80 +1.2 5,070,414 + AO353_23100 0.89 +0.0 5,070,415 - -1.4 5,070,415 - AO353_23100 0.89 +1.3 5,070,415 - AO353_23100 0.89 +0.8 5,070,415 - AO353_23100 0.89 +0.1 5,070,415 - AO353_23100 0.89 +2.4 5,070,415 - AO353_23100 0.89 +1.6 5,070,551 + +1.6 5,070,662 + AO353_23105 0.13 -1.4 5,070,668 + AO353_23105 0.13 +0.8 5,070,668 + AO353_23105 0.13 +1.6 5,070,668 + AO353_23105 0.13 -0.0 5,070,669 - AO353_23105 0.13 -1.0 5,070,669 - AO353_23105 0.13 -2.0 5,070,669 - AO353_23105 0.13 -2.0 5,070,669 - AO353_23105 0.13 +1.2 5,070,669 - AO353_23105 0.13 +0.3 5,070,669 - AO353_23105 0.13 +0.2 5,070,677 + AO353_23105 0.14 -1.7 5,070,677 + AO353_23105 0.14 +1.2 5,070,753 - AO353_23105 0.23 -0.1 5,070,753 - AO353_23105 0.23 -0.1 5,070,760 + AO353_23105 0.24 +0.2 5,070,760 + AO353_23105 0.24 -0.4 5,070,761 - AO353_23105 0.24 -1.1 5,070,761 - AO353_23105 0.24 -1.7 5,070,812 + AO353_23105 0.30 +0.7 5,070,812 + AO353_23105 0.30 +1.2 5,070,813 - AO353_23105 0.30 +2.1 5,070,813 - AO353_23105 0.30 +1.4 5,070,813 - +1.6 5,070,878 + AO353_23105 0.37 +0.1 5,071,101 - AO353_23105 0.62 +0.9 5,071,214 + AO353_23105 0.75 +2.6 5,071,214 + AO353_23105 0.75 -1.6 5,071,224 - AO353_23105 0.76 -0.4 5,071,274 + AO353_23105 0.82 +2.8 5,071,274 + AO353_23105 0.82 +1.3 5,071,274 + AO353_23105 0.82 -0.9 5,071,274 + AO353_23105 0.82 -2.0 5,071,275 - AO353_23105 0.82 -0.7 5,071,275 - AO353_23105 0.82 +1.1 5,071,322 - AO353_23105 0.87 -1.4 5,071,322 - AO353_23105 0.87 -0.4 5,071,379 + -0.4 5,071,379 + -2.0 5,071,380 - +0.0 5,071,380 - -0.7 5,071,382 + +0.9 5,071,382 + +1.2 5,071,382 + +0.6 5,071,382 + +0.6 5,071,383 - -0.4 5,071,383 - -0.1 5,071,425 + +0.2 5,071,425 + -1.4 5,071,426 - -1.4
Or see this region's nucleotide sequence