Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_17410

Experiment: Thallium(I) acetate 0.008 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO353_17400 and AO353_17405 are separated by 387 nucleotidesAO353_17405 and AO353_17410 are separated by 14 nucleotidesAO353_17410 and AO353_17415 are separated by 182 nucleotidesAO353_17415 and AO353_17420 are separated by 393 nucleotides AO353_17400: AO353_17400 - transporter, at 3,844,484 to 3,845,404 _17400 AO353_17405: AO353_17405 - glutamine amidotransferase, at 3,845,792 to 3,846,373 _17405 AO353_17410: AO353_17410 - arylsulfate sulfotransferase, at 3,846,388 to 3,846,693 _17410 AO353_17415: AO353_17415 - hypothetical protein, at 3,846,876 to 3,847,220 _17415 AO353_17420: AO353_17420 - hypothetical protein, at 3,847,614 to 3,848,633 _17420 Position (kb) 3846 3847Strain fitness (log2 ratio) -2 -1 0 1 2 3at 3845.405 kb on - strandat 3845.405 kb on - strandat 3845.446 kb on + strandat 3845.446 kb on + strandat 3845.447 kb on - strandat 3845.452 kb on + strandat 3845.452 kb on + strandat 3845.453 kb on - strandat 3845.453 kb on - strandat 3845.474 kb on + strandat 3845.474 kb on + strandat 3845.474 kb on + strandat 3845.474 kb on + strandat 3845.474 kb on + strandat 3845.474 kb on + strandat 3845.475 kb on - strandat 3845.481 kb on - strandat 3845.481 kb on - strandat 3845.481 kb on - strandat 3845.481 kb on - strandat 3845.498 kb on + strandat 3845.498 kb on + strandat 3845.498 kb on + strandat 3845.499 kb on - strandat 3845.499 kb on - strandat 3845.499 kb on - strandat 3845.499 kb on - strandat 3845.499 kb on - strandat 3845.578 kb on + strandat 3845.617 kb on - strandat 3845.617 kb on - strandat 3845.617 kb on - strandat 3845.683 kb on + strandat 3845.683 kb on + strandat 3845.684 kb on - strandat 3845.684 kb on - strandat 3845.684 kb on - strandat 3845.684 kb on - strandat 3845.702 kb on + strandat 3845.702 kb on + strandat 3845.702 kb on + strandat 3845.702 kb on + strandat 3845.702 kb on + strandat 3845.702 kb on + strandat 3845.702 kb on + strandat 3845.702 kb on + strandat 3845.703 kb on - strandat 3845.703 kb on - strandat 3845.703 kb on - strandat 3845.703 kb on - strandat 3845.703 kb on - strandat 3845.703 kb on - strandat 3845.703 kb on - strandat 3845.703 kb on - strandat 3845.703 kb on - strandat 3845.703 kb on - strandat 3845.703 kb on - strandat 3845.706 kb on + strandat 3845.706 kb on + strandat 3845.706 kb on + strandat 3845.706 kb on + strandat 3845.706 kb on + strandat 3845.706 kb on + strandat 3845.706 kb on + strandat 3845.706 kb on + strandat 3845.706 kb on + strandat 3845.706 kb on + strandat 3845.706 kb on + strandat 3845.706 kb on + strandat 3845.706 kb on + strandat 3845.706 kb on + strandat 3845.706 kb on + strandat 3845.707 kb on - strandat 3845.707 kb on - strandat 3845.707 kb on - strandat 3845.707 kb on - strandat 3845.707 kb on - strandat 3845.709 kb on + strandat 3845.709 kb on + strandat 3845.709 kb on + strandat 3845.710 kb on - strandat 3845.710 kb on - strandat 3845.710 kb on - strandat 3845.710 kb on - strandat 3845.710 kb on - strandat 3845.710 kb on - strandat 3845.717 kb on + strandat 3845.743 kb on + strandat 3845.744 kb on - strandat 3845.744 kb on - strandat 3845.744 kb on - strandat 3845.752 kb on + strandat 3845.752 kb on + strandat 3845.752 kb on + strandat 3845.752 kb on + strandat 3845.752 kb on + strandat 3845.752 kb on + strandat 3845.752 kb on + strandat 3845.753 kb on - strandat 3845.753 kb on - strandat 3845.753 kb on - strandat 3845.774 kb on - strandat 3845.828 kb on + strandat 3845.828 kb on + strandat 3845.828 kb on + strandat 3845.828 kb on + strandat 3845.828 kb on + strandat 3845.828 kb on + strandat 3845.829 kb on - strandat 3845.829 kb on - strandat 3845.829 kb on - strandat 3845.829 kb on - strandat 3845.966 kb on + strand, within AO353_17405at 3845.966 kb on + strand, within AO353_17405at 3845.966 kb on + strand, within AO353_17405at 3845.966 kb on + strand, within AO353_17405at 3845.966 kb on + strand, within AO353_17405at 3845.967 kb on - strand, within AO353_17405at 3845.967 kb on - strand, within AO353_17405at 3845.967 kb on - strand, within AO353_17405at 3845.967 kb on - strand, within AO353_17405at 3846.071 kb on + strand, within AO353_17405at 3846.071 kb on + strand, within AO353_17405at 3846.071 kb on + strand, within AO353_17405at 3846.071 kb on + strand, within AO353_17405at 3846.072 kb on - strand, within AO353_17405at 3846.072 kb on - strand, within AO353_17405at 3846.072 kb on - strand, within AO353_17405at 3846.072 kb on - strand, within AO353_17405at 3846.096 kb on + strand, within AO353_17405at 3846.096 kb on + strand, within AO353_17405at 3846.371 kb on + strandat 3846.371 kb on + strandat 3846.372 kb on - strandat 3846.372 kb on - strandat 3846.372 kb on - strandat 3846.400 kb on + strandat 3846.401 kb on - strandat 3846.401 kb on - strandat 3846.401 kb on - strandat 3846.425 kb on - strand, within AO353_17410at 3846.559 kb on + strand, within AO353_17410at 3846.559 kb on + strand, within AO353_17410at 3846.665 kb on + strandat 3846.691 kb on + strandat 3846.691 kb on + strandat 3846.691 kb on + strandat 3846.691 kb on + strandat 3846.691 kb on + strandat 3846.691 kb on + strandat 3846.691 kb on + strandat 3846.692 kb on - strandat 3846.692 kb on - strandat 3846.692 kb on - strandat 3846.692 kb on - strandat 3846.692 kb on - strandat 3846.692 kb on - strandat 3846.692 kb on - strandat 3846.703 kb on + strandat 3846.703 kb on + strandat 3846.703 kb on + strandat 3846.703 kb on + strandat 3846.703 kb on + strandat 3846.704 kb on - strandat 3846.704 kb on - strandat 3846.704 kb on - strandat 3846.704 kb on - strandat 3846.704 kb on - strandat 3846.774 kb on - strandat 3846.835 kb on - strandat 3846.835 kb on - strandat 3846.835 kb on - strandat 3846.888 kb on + strandat 3846.888 kb on + strandat 3846.888 kb on + strandat 3846.889 kb on - strandat 3846.889 kb on - strandat 3846.959 kb on + strand, within AO353_17415at 3846.960 kb on - strand, within AO353_17415at 3846.972 kb on + strand, within AO353_17415at 3846.973 kb on - strandat 3846.973 kb on - strand, within AO353_17415at 3846.973 kb on - strand, within AO353_17415at 3846.973 kb on - strand, within AO353_17415at 3846.973 kb on - strand, within AO353_17415at 3846.973 kb on - strand, within AO353_17415at 3846.973 kb on - strand, within AO353_17415at 3846.973 kb on - strand, within AO353_17415at 3847.041 kb on + strand, within AO353_17415at 3847.042 kb on - strand, within AO353_17415at 3847.042 kb on - strand, within AO353_17415at 3847.074 kb on + strand, within AO353_17415at 3847.074 kb on + strand, within AO353_17415at 3847.074 kb on + strand, within AO353_17415at 3847.074 kb on + strand, within AO353_17415at 3847.074 kb on + strand, within AO353_17415at 3847.074 kb on + strand, within AO353_17415at 3847.074 kb on + strand, within AO353_17415at 3847.074 kb on + strand, within AO353_17415at 3847.074 kb on + strand, within AO353_17415at 3847.075 kb on - strand, within AO353_17415at 3847.075 kb on - strand, within AO353_17415at 3847.075 kb on - strand, within AO353_17415at 3847.075 kb on - strand, within AO353_17415at 3847.075 kb on - strand, within AO353_17415at 3847.075 kb on - strand, within AO353_17415at 3847.075 kb on - strand, within AO353_17415at 3847.075 kb on - strand, within AO353_17415at 3847.075 kb on - strand, within AO353_17415at 3847.075 kb on - strand, within AO353_17415at 3847.075 kb on - strand, within AO353_17415at 3847.075 kb on - strand, within AO353_17415at 3847.125 kb on + strand, within AO353_17415at 3847.125 kb on + strand, within AO353_17415at 3847.125 kb on + strand, within AO353_17415at 3847.125 kb on + strand, within AO353_17415at 3847.126 kb on - strand, within AO353_17415at 3847.126 kb on - strand, within AO353_17415at 3847.126 kb on - strand, within AO353_17415at 3847.126 kb on - strand, within AO353_17415at 3847.126 kb on - strand, within AO353_17415at 3847.218 kb on + strandat 3847.219 kb on - strandat 3847.219 kb on - strandat 3847.219 kb on - strandat 3847.219 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml
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3,845,405 - +0.5
3,845,405 - +0.1
3,845,446 + +0.1
3,845,446 + +0.3
3,845,447 - -0.5
3,845,452 + -0.0
3,845,452 + -1.3
3,845,453 - -0.4
3,845,453 - -1.3
3,845,474 + +0.5
3,845,474 + +1.2
3,845,474 + -0.0
3,845,474 + +3.0
3,845,474 + -1.9
3,845,474 + -1.0
3,845,475 - +1.1
3,845,481 - -0.0
3,845,481 - -1.0
3,845,481 - -0.0
3,845,481 - -0.0
3,845,498 + -1.0
3,845,498 + -0.0
3,845,498 + -0.4
3,845,499 - -0.9
3,845,499 - -0.2
3,845,499 - +0.4
3,845,499 - -0.2
3,845,499 - +2.0
3,845,578 + +0.1
3,845,617 - -1.0
3,845,617 - -1.0
3,845,617 - +0.4
3,845,683 + -0.0
3,845,683 + +0.4
3,845,684 - -0.0
3,845,684 - -1.0
3,845,684 - +0.7
3,845,684 - -1.0
3,845,702 + +1.0
3,845,702 + +0.3
3,845,702 + -1.0
3,845,702 + -0.5
3,845,702 + -0.0
3,845,702 + +0.1
3,845,702 + +0.5
3,845,702 + -0.8
3,845,703 - +2.3
3,845,703 - -0.3
3,845,703 - +1.4
3,845,703 - +0.4
3,845,703 - -0.0
3,845,703 - +0.5
3,845,703 - -0.5
3,845,703 - -2.0
3,845,703 - -1.6
3,845,703 - +1.8
3,845,703 - -1.6
3,845,706 + -0.0
3,845,706 + +1.8
3,845,706 + -1.0
3,845,706 + -0.0
3,845,706 + +1.0
3,845,706 + -1.3
3,845,706 + +1.0
3,845,706 + +2.8
3,845,706 + +3.0
3,845,706 + -1.6
3,845,706 + -1.0
3,845,706 + -0.4
3,845,706 + -0.4
3,845,706 + +0.7
3,845,706 + +0.5
3,845,707 - +1.3
3,845,707 - +1.5
3,845,707 - -1.5
3,845,707 - -1.0
3,845,707 - +1.0
3,845,709 + +0.3
3,845,709 + -0.7
3,845,709 + +1.2
3,845,710 - -1.6
3,845,710 - -1.6
3,845,710 - +1.0
3,845,710 - +1.3
3,845,710 - -2.0
3,845,710 - +0.5
3,845,717 + +0.8
3,845,743 + +1.0
3,845,744 - +0.5
3,845,744 - +0.3
3,845,744 - -0.0
3,845,752 + -0.0
3,845,752 + +0.5
3,845,752 + -0.5
3,845,752 + +1.5
3,845,752 + -0.8
3,845,752 + -2.6
3,845,752 + +1.5
3,845,753 - -0.4
3,845,753 - +1.3
3,845,753 - -0.3
3,845,774 - +0.4
3,845,828 + -0.5
3,845,828 + +0.7
3,845,828 + +1.5
3,845,828 + +0.4
3,845,828 + +1.5
3,845,828 + -1.6
3,845,829 - +1.0
3,845,829 - +1.5
3,845,829 - +0.4
3,845,829 - +0.7
3,845,966 + AO353_17405 0.30 +1.0
3,845,966 + AO353_17405 0.30 +0.2
3,845,966 + AO353_17405 0.30 -1.8
3,845,966 + AO353_17405 0.30 -0.6
3,845,966 + AO353_17405 0.30 +2.5
3,845,967 - AO353_17405 0.30 -0.0
3,845,967 - AO353_17405 0.30 +1.3
3,845,967 - AO353_17405 0.30 +0.7
3,845,967 - AO353_17405 0.30 +0.1
3,846,071 + AO353_17405 0.48 -0.0
3,846,071 + AO353_17405 0.48 +0.4
3,846,071 + AO353_17405 0.48 +1.0
3,846,071 + AO353_17405 0.48 +1.9
3,846,072 - AO353_17405 0.48 -0.0
3,846,072 - AO353_17405 0.48 +1.6
3,846,072 - AO353_17405 0.48 +3.0
3,846,072 - AO353_17405 0.48 -0.0
3,846,096 + AO353_17405 0.52 -0.6
3,846,096 + AO353_17405 0.52 -0.0
3,846,371 + +2.0
3,846,371 + -0.0
3,846,372 - -0.0
3,846,372 - -0.6
3,846,372 - -0.0
3,846,400 + -1.0
3,846,401 - -0.0
3,846,401 - -2.0
3,846,401 - +0.8
3,846,425 - AO353_17410 0.12 -1.4
3,846,559 + AO353_17410 0.56 -1.0
3,846,559 + AO353_17410 0.56 +1.1
3,846,665 + +1.0
3,846,691 + +2.5
3,846,691 + -0.0
3,846,691 + -1.0
3,846,691 + -0.0
3,846,691 + +0.5
3,846,691 + -1.9
3,846,691 + +0.5
3,846,692 - +0.4
3,846,692 - -0.0
3,846,692 - +1.1
3,846,692 - +0.5
3,846,692 - -2.4
3,846,692 - +0.4
3,846,692 - -0.4
3,846,703 + -0.6
3,846,703 + +1.5
3,846,703 + -1.2
3,846,703 + -0.6
3,846,703 + +1.0
3,846,704 - -1.4
3,846,704 - +1.8
3,846,704 - +1.7
3,846,704 - -0.0
3,846,704 - +1.0
3,846,774 - -0.0
3,846,835 - +0.7
3,846,835 - -1.6
3,846,835 - -0.6
3,846,888 + -0.8
3,846,888 + +2.0
3,846,888 + -0.6
3,846,889 - -1.0
3,846,889 - +1.0
3,846,959 + AO353_17415 0.24 +1.0
3,846,960 - AO353_17415 0.24 +1.0
3,846,972 + AO353_17415 0.28 -0.0
3,846,973 - +2.3
3,846,973 - AO353_17415 0.28 +2.5
3,846,973 - AO353_17415 0.28 +0.5
3,846,973 - AO353_17415 0.28 +0.7
3,846,973 - AO353_17415 0.28 +2.0
3,846,973 - AO353_17415 0.28 +0.4
3,846,973 - AO353_17415 0.28 +2.0
3,846,973 - AO353_17415 0.28 +0.5
3,847,041 + AO353_17415 0.48 -0.0
3,847,042 - AO353_17415 0.48 +2.3
3,847,042 - AO353_17415 0.48 +1.0
3,847,074 + AO353_17415 0.57 +0.7
3,847,074 + AO353_17415 0.57 +1.0
3,847,074 + AO353_17415 0.57 -0.0
3,847,074 + AO353_17415 0.57 +1.7
3,847,074 + AO353_17415 0.57 -1.6
3,847,074 + AO353_17415 0.57 -0.0
3,847,074 + AO353_17415 0.57 +1.0
3,847,074 + AO353_17415 0.57 +1.3
3,847,074 + AO353_17415 0.57 +0.3
3,847,075 - AO353_17415 0.58 +0.2
3,847,075 - AO353_17415 0.58 +0.4
3,847,075 - AO353_17415 0.58 +0.5
3,847,075 - AO353_17415 0.58 -0.0
3,847,075 - AO353_17415 0.58 -0.0
3,847,075 - AO353_17415 0.58 -0.0
3,847,075 - AO353_17415 0.58 +1.5
3,847,075 - AO353_17415 0.58 -0.0
3,847,075 - AO353_17415 0.58 +1.5
3,847,075 - AO353_17415 0.58 -0.0
3,847,075 - AO353_17415 0.58 -0.6
3,847,075 - AO353_17415 0.58 -1.0
3,847,125 + AO353_17415 0.72 +0.3
3,847,125 + AO353_17415 0.72 +0.8
3,847,125 + AO353_17415 0.72 +1.1
3,847,125 + AO353_17415 0.72 +2.8
3,847,126 - AO353_17415 0.72 -0.0
3,847,126 - AO353_17415 0.72 +1.5
3,847,126 - AO353_17415 0.72 +0.3
3,847,126 - AO353_17415 0.72 -0.0
3,847,126 - AO353_17415 0.72 +0.7
3,847,218 + +1.8
3,847,219 - +1.4
3,847,219 - +0.8
3,847,219 - +0.6
3,847,219 - -1.0

Or see this region's nucleotide sequence