Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_10610 and AO353_10615 are separated by 71 nucleotides AO353_10615 and AO353_10620 are separated by 16 nucleotides AO353_10620 and AO353_10625 are separated by 178 nucleotides
AO353_10610: AO353_10610 - lipid A biosynthesis lauroyl acyltransferase, at 2,327,492 to 2,328,379
_10610
AO353_10615: AO353_10615 - pilus assembly protein PilZ, at 2,328,451 to 2,328,690
_10615
AO353_10620: AO353_10620 - hypothetical protein, at 2,328,707 to 2,329,021
_10620
AO353_10625: AO353_10625 - potassium transporter peripheral membrane component, at 2,329,200 to 2,330,573
_10625
Position (kb)
2328
2329
2330 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 2328.375 kb on - strand at 2328.465 kb on + strand at 2328.465 kb on + strand at 2328.465 kb on + strand at 2328.465 kb on + strand at 2328.465 kb on + strand at 2328.465 kb on + strand at 2328.465 kb on + strand at 2328.465 kb on + strand at 2328.465 kb on + strand at 2328.465 kb on + strand at 2328.465 kb on + strand at 2328.466 kb on - strand at 2328.466 kb on - strand at 2328.466 kb on - strand at 2328.466 kb on - strand at 2328.466 kb on - strand at 2328.466 kb on - strand at 2328.466 kb on - strand at 2328.547 kb on + strand, within AO353_10615 at 2328.547 kb on + strand, within AO353_10615 at 2328.548 kb on - strand, within AO353_10615 at 2328.548 kb on - strand, within AO353_10615 at 2328.595 kb on + strand, within AO353_10615 at 2328.595 kb on + strand, within AO353_10615 at 2328.595 kb on + strand, within AO353_10615 at 2328.595 kb on + strand, within AO353_10615 at 2328.595 kb on + strand, within AO353_10615 at 2328.595 kb on + strand, within AO353_10615 at 2328.596 kb on - strand, within AO353_10615 at 2328.596 kb on - strand, within AO353_10615 at 2328.596 kb on - strand, within AO353_10615 at 2328.596 kb on - strand, within AO353_10615 at 2328.596 kb on - strand, within AO353_10615 at 2328.596 kb on - strand, within AO353_10615 at 2328.683 kb on - strand at 2328.683 kb on - strand at 2328.725 kb on + strand at 2328.726 kb on - strand at 2328.726 kb on - strand at 2328.843 kb on + strand, within AO353_10620 at 2328.843 kb on + strand, within AO353_10620 at 2328.843 kb on + strand, within AO353_10620 at 2328.843 kb on + strand, within AO353_10620 at 2328.843 kb on + strand, within AO353_10620 at 2328.843 kb on + strand, within AO353_10620 at 2328.843 kb on + strand, within AO353_10620 at 2328.843 kb on + strand, within AO353_10620 at 2328.843 kb on + strand, within AO353_10620 at 2328.844 kb on - strand, within AO353_10620 at 2328.844 kb on - strand, within AO353_10620 at 2328.844 kb on - strand, within AO353_10620 at 2328.844 kb on - strand, within AO353_10620 at 2328.844 kb on - strand, within AO353_10620 at 2328.844 kb on - strand, within AO353_10620 at 2328.876 kb on + strand, within AO353_10620 at 2328.876 kb on + strand, within AO353_10620 at 2328.876 kb on + strand, within AO353_10620 at 2328.876 kb on + strand, within AO353_10620 at 2328.945 kb on + strand, within AO353_10620 at 2328.946 kb on - strand, within AO353_10620 at 2329.023 kb on + strand at 2329.023 kb on + strand at 2329.023 kb on + strand at 2329.023 kb on + strand at 2329.023 kb on + strand at 2329.023 kb on + strand at 2329.023 kb on + strand at 2329.023 kb on + strand at 2329.023 kb on + strand at 2329.023 kb on + strand at 2329.023 kb on + strand at 2329.024 kb on - strand at 2329.024 kb on - strand at 2329.024 kb on - strand at 2329.024 kb on - strand at 2329.024 kb on - strand at 2329.024 kb on - strand at 2329.024 kb on - strand at 2329.024 kb on - strand at 2329.024 kb on - strand at 2329.024 kb on - strand at 2329.024 kb on - strand at 2329.024 kb on - strand at 2329.024 kb on - strand at 2329.024 kb on - strand at 2329.024 kb on - strand at 2329.131 kb on + strand at 2329.131 kb on + strand at 2329.131 kb on + strand at 2329.131 kb on + strand at 2329.131 kb on + strand at 2329.131 kb on + strand at 2329.131 kb on + strand at 2329.131 kb on + strand at 2329.131 kb on + strand at 2329.131 kb on + strand at 2329.131 kb on + strand at 2329.131 kb on + strand at 2329.131 kb on + strand at 2329.131 kb on + strand at 2329.131 kb on + strand at 2329.131 kb on + strand at 2329.131 kb on + strand at 2329.131 kb on + strand at 2329.131 kb on + strand at 2329.131 kb on + strand at 2329.131 kb on + strand at 2329.131 kb on + strand at 2329.132 kb on - strand at 2329.132 kb on - strand at 2329.132 kb on - strand at 2329.132 kb on - strand at 2329.132 kb on - strand at 2329.132 kb on - strand at 2329.132 kb on - strand at 2329.132 kb on - strand at 2329.132 kb on - strand at 2329.132 kb on - strand at 2329.132 kb on - strand at 2329.132 kb on - strand at 2329.132 kb on - strand at 2329.132 kb on - strand at 2329.132 kb on - strand at 2329.132 kb on - strand at 2329.132 kb on - strand at 2329.132 kb on - strand at 2329.132 kb on - strand at 2329.132 kb on - strand at 2329.132 kb on - strand at 2329.132 kb on - strand at 2329.132 kb on - strand at 2329.132 kb on - strand at 2329.132 kb on - strand at 2329.132 kb on - strand at 2329.132 kb on - strand at 2329.132 kb on - strand at 2329.132 kb on - strand at 2329.247 kb on + strand at 2329.247 kb on + strand at 2329.247 kb on + strand at 2329.247 kb on + strand at 2329.247 kb on + strand at 2329.248 kb on - strand at 2329.248 kb on - strand at 2329.248 kb on - strand at 2329.248 kb on - strand at 2329.257 kb on - strand at 2329.349 kb on + strand, within AO353_10625 at 2329.349 kb on + strand, within AO353_10625 at 2329.349 kb on + strand, within AO353_10625 at 2329.349 kb on + strand, within AO353_10625 at 2329.349 kb on + strand, within AO353_10625 at 2329.349 kb on + strand, within AO353_10625 at 2329.349 kb on + strand, within AO353_10625 at 2329.349 kb on + strand, within AO353_10625 at 2329.349 kb on + strand, within AO353_10625 at 2329.349 kb on + strand, within AO353_10625 at 2329.349 kb on + strand, within AO353_10625 at 2329.349 kb on + strand, within AO353_10625 at 2329.349 kb on + strand, within AO353_10625 at 2329.350 kb on - strand, within AO353_10625 at 2329.350 kb on - strand, within AO353_10625 at 2329.350 kb on - strand, within AO353_10625 at 2329.350 kb on - strand, within AO353_10625 at 2329.350 kb on - strand, within AO353_10625 at 2329.350 kb on - strand, within AO353_10625 at 2329.350 kb on - strand, within AO353_10625 at 2329.350 kb on - strand, within AO353_10625 at 2329.352 kb on + strand, within AO353_10625 at 2329.352 kb on + strand, within AO353_10625 at 2329.352 kb on + strand, within AO353_10625 at 2329.352 kb on + strand, within AO353_10625 at 2329.353 kb on - strand, within AO353_10625 at 2329.353 kb on - strand, within AO353_10625 at 2329.353 kb on - strand, within AO353_10625 at 2329.353 kb on - strand, within AO353_10625 at 2329.353 kb on - strand, within AO353_10625 at 2329.353 kb on - strand, within AO353_10625 at 2329.353 kb on - strand, within AO353_10625 at 2329.353 kb on - strand, within AO353_10625 at 2329.509 kb on - strand, within AO353_10625 at 2329.547 kb on + strand, within AO353_10625 at 2329.573 kb on + strand, within AO353_10625 at 2329.573 kb on + strand, within AO353_10625 at 2329.573 kb on + strand, within AO353_10625 at 2329.573 kb on + strand, within AO353_10625 at 2329.573 kb on + strand, within AO353_10625 at 2329.573 kb on + strand, within AO353_10625 at 2329.573 kb on + strand, within AO353_10625 at 2329.573 kb on + strand, within AO353_10625 at 2329.573 kb on + strand, within AO353_10625 at 2329.573 kb on + strand, within AO353_10625 at 2329.574 kb on - strand, within AO353_10625 at 2329.574 kb on - strand, within AO353_10625 at 2329.695 kb on - strand, within AO353_10625 at 2329.710 kb on + strand, within AO353_10625 at 2329.710 kb on + strand, within AO353_10625 at 2329.710 kb on + strand, within AO353_10625 at 2329.710 kb on + strand, within AO353_10625 at 2329.710 kb on + strand, within AO353_10625 at 2329.710 kb on + strand, within AO353_10625 at 2329.710 kb on + strand, within AO353_10625 at 2329.710 kb on + strand, within AO353_10625 at 2329.710 kb on + strand, within AO353_10625 at 2329.710 kb on + strand, within AO353_10625 at 2329.710 kb on + strand, within AO353_10625 at 2329.711 kb on - strand, within AO353_10625 at 2329.711 kb on - strand, within AO353_10625 at 2329.711 kb on - strand, within AO353_10625 at 2329.711 kb on - strand, within AO353_10625 at 2329.711 kb on - strand, within AO353_10625 at 2329.711 kb on - strand, within AO353_10625 at 2329.771 kb on + strand, within AO353_10625 at 2329.771 kb on + strand, within AO353_10625 at 2329.814 kb on - strand, within AO353_10625 at 2329.882 kb on + strand, within AO353_10625 at 2329.882 kb on + strand, within AO353_10625 at 2329.882 kb on + strand, within AO353_10625 at 2329.882 kb on + strand, within AO353_10625 at 2329.882 kb on + strand, within AO353_10625 at 2329.882 kb on + strand, within AO353_10625 at 2329.882 kb on + strand, within AO353_10625 at 2329.882 kb on + strand, within AO353_10625 at 2329.882 kb on + strand, within AO353_10625 at 2329.882 kb on + strand, within AO353_10625 at 2329.882 kb on + strand, within AO353_10625 at 2329.882 kb on + strand, within AO353_10625 at 2329.882 kb on + strand, within AO353_10625 at 2329.883 kb on - strand, within AO353_10625 at 2329.883 kb on - strand, within AO353_10625 at 2329.883 kb on - strand, within AO353_10625 at 2329.883 kb on - strand, within AO353_10625 at 2329.883 kb on - strand, within AO353_10625 at 2329.883 kb on - strand, within AO353_10625 at 2329.944 kb on - strand, within AO353_10625
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 2,328,375 - -1.0 2,328,465 + -0.7 2,328,465 + -1.4 2,328,465 + -0.3 2,328,465 + -1.2 2,328,465 + +1.0 2,328,465 + -0.4 2,328,465 + -0.8 2,328,465 + +1.6 2,328,465 + +0.6 2,328,465 + +0.3 2,328,465 + +0.1 2,328,466 - +1.7 2,328,466 - +1.3 2,328,466 - -0.4 2,328,466 - +0.1 2,328,466 - -0.8 2,328,466 - -0.4 2,328,466 - +0.6 2,328,547 + AO353_10615 0.40 -0.1 2,328,547 + AO353_10615 0.40 -1.4 2,328,548 - AO353_10615 0.40 +1.6 2,328,548 - AO353_10615 0.40 +0.6 2,328,595 + AO353_10615 0.60 -0.8 2,328,595 + AO353_10615 0.60 -1.0 2,328,595 + AO353_10615 0.60 -1.0 2,328,595 + AO353_10615 0.60 -2.7 2,328,595 + AO353_10615 0.60 +1.6 2,328,595 + AO353_10615 0.60 -1.8 2,328,596 - AO353_10615 0.60 +0.3 2,328,596 - AO353_10615 0.60 -0.9 2,328,596 - AO353_10615 0.60 -2.8 2,328,596 - AO353_10615 0.60 +1.6 2,328,596 - AO353_10615 0.60 +0.2 2,328,596 - AO353_10615 0.60 +0.9 2,328,683 - +0.7 2,328,683 - -0.3 2,328,725 + -1.0 2,328,726 - +0.6 2,328,726 - -0.4 2,328,843 + AO353_10620 0.43 +1.0 2,328,843 + AO353_10620 0.43 -2.0 2,328,843 + AO353_10620 0.43 -0.4 2,328,843 + AO353_10620 0.43 -0.4 2,328,843 + AO353_10620 0.43 -2.2 2,328,843 + AO353_10620 0.43 -0.4 2,328,843 + AO353_10620 0.43 -1.0 2,328,843 + AO353_10620 0.43 -1.0 2,328,843 + AO353_10620 0.43 +2.9 2,328,844 - AO353_10620 0.43 -2.4 2,328,844 - AO353_10620 0.43 +1.9 2,328,844 - AO353_10620 0.43 -0.4 2,328,844 - AO353_10620 0.43 -1.4 2,328,844 - AO353_10620 0.43 +0.6 2,328,844 - AO353_10620 0.43 -1.8 2,328,876 + AO353_10620 0.54 +0.6 2,328,876 + AO353_10620 0.54 -2.0 2,328,876 + AO353_10620 0.54 +0.1 2,328,876 + AO353_10620 0.54 -2.6 2,328,945 + AO353_10620 0.76 +0.6 2,328,946 - AO353_10620 0.76 -1.8 2,329,023 + -0.4 2,329,023 + -1.0 2,329,023 + -1.0 2,329,023 + -3.1 2,329,023 + -1.8 2,329,023 + -1.9 2,329,023 + -2.0 2,329,023 + -0.4 2,329,023 + -1.0 2,329,023 + -2.4 2,329,023 + -0.4 2,329,024 - -0.8 2,329,024 - -1.4 2,329,024 - -1.4 2,329,024 - +0.1 2,329,024 - +0.6 2,329,024 - -1.8 2,329,024 - -1.4 2,329,024 - -0.4 2,329,024 - +0.6 2,329,024 - -0.4 2,329,024 - -0.4 2,329,024 - -1.0 2,329,024 - +2.6 2,329,024 - +0.6 2,329,024 - -2.6 2,329,131 + -0.1 2,329,131 + -0.0 2,329,131 + -1.0 2,329,131 + +1.6 2,329,131 + -0.2 2,329,131 + -1.0 2,329,131 + +0.6 2,329,131 + -1.4 2,329,131 + +0.6 2,329,131 + +0.6 2,329,131 + -1.0 2,329,131 + -1.0 2,329,131 + -0.4 2,329,131 + -0.4 2,329,131 + -1.0 2,329,131 + -0.2 2,329,131 + -1.4 2,329,131 + -1.4 2,329,131 + -0.4 2,329,131 + -1.0 2,329,131 + -1.0 2,329,131 + +2.6 2,329,132 - -0.6 2,329,132 - +3.9 2,329,132 - +2.8 2,329,132 - +3.1 2,329,132 - +3.1 2,329,132 - +2.1 2,329,132 - +2.9 2,329,132 - +0.9 2,329,132 - +3.4 2,329,132 - +1.4 2,329,132 - -0.4 2,329,132 - +0.6 2,329,132 - +3.1 2,329,132 - +4.3 2,329,132 - -0.0 2,329,132 - +2.3 2,329,132 - +1.9 2,329,132 - +1.8 2,329,132 - +0.3 2,329,132 - +2.0 2,329,132 - +0.6 2,329,132 - +2.5 2,329,132 - -1.4 2,329,132 - +1.0 2,329,132 - +3.3 2,329,132 - +2.9 2,329,132 - +2.5 2,329,132 - +2.5 2,329,132 - +1.5 2,329,247 + -1.0 2,329,247 + +2.1 2,329,247 + -0.1 2,329,247 + +1.5 2,329,247 + -2.8 2,329,248 - +2.8 2,329,248 - +2.6 2,329,248 - +1.9 2,329,248 - +1.6 2,329,257 - -0.4 2,329,349 + AO353_10625 0.11 -2.2 2,329,349 + AO353_10625 0.11 -0.0 2,329,349 + AO353_10625 0.11 -2.8 2,329,349 + AO353_10625 0.11 -2.0 2,329,349 + AO353_10625 0.11 -0.0 2,329,349 + AO353_10625 0.11 -1.8 2,329,349 + AO353_10625 0.11 +0.2 2,329,349 + AO353_10625 0.11 -1.0 2,329,349 + AO353_10625 0.11 -2.2 2,329,349 + AO353_10625 0.11 -0.4 2,329,349 + AO353_10625 0.11 +0.6 2,329,349 + AO353_10625 0.11 -0.4 2,329,349 + AO353_10625 0.11 -0.4 2,329,350 - AO353_10625 0.11 +3.4 2,329,350 - AO353_10625 0.11 +0.6 2,329,350 - AO353_10625 0.11 +2.0 2,329,350 - AO353_10625 0.11 +1.6 2,329,350 - AO353_10625 0.11 +0.6 2,329,350 - AO353_10625 0.11 +1.9 2,329,350 - AO353_10625 0.11 -0.4 2,329,350 - AO353_10625 0.11 +1.9 2,329,352 + AO353_10625 0.11 -2.0 2,329,352 + AO353_10625 0.11 -1.0 2,329,352 + AO353_10625 0.11 -0.4 2,329,352 + AO353_10625 0.11 -0.9 2,329,353 - AO353_10625 0.11 +2.6 2,329,353 - AO353_10625 0.11 +0.6 2,329,353 - AO353_10625 0.11 +1.8 2,329,353 - AO353_10625 0.11 +1.3 2,329,353 - AO353_10625 0.11 +1.9 2,329,353 - AO353_10625 0.11 -0.0 2,329,353 - AO353_10625 0.11 +2.8 2,329,353 - AO353_10625 0.11 +1.6 2,329,509 - AO353_10625 0.22 +1.7 2,329,547 + AO353_10625 0.25 -1.0 2,329,573 + AO353_10625 0.27 -1.4 2,329,573 + AO353_10625 0.27 -0.4 2,329,573 + AO353_10625 0.27 -1.0 2,329,573 + AO353_10625 0.27 +0.6 2,329,573 + AO353_10625 0.27 +0.1 2,329,573 + AO353_10625 0.27 -0.4 2,329,573 + AO353_10625 0.27 +2.1 2,329,573 + AO353_10625 0.27 -1.8 2,329,573 + AO353_10625 0.27 -0.2 2,329,573 + AO353_10625 0.27 -1.0 2,329,574 - AO353_10625 0.27 +2.6 2,329,574 - AO353_10625 0.27 +4.0 2,329,695 - AO353_10625 0.36 +1.0 2,329,710 + AO353_10625 0.37 +2.6 2,329,710 + AO353_10625 0.37 -0.8 2,329,710 + AO353_10625 0.37 -0.7 2,329,710 + AO353_10625 0.37 -1.0 2,329,710 + AO353_10625 0.37 +1.6 2,329,710 + AO353_10625 0.37 +0.6 2,329,710 + AO353_10625 0.37 -0.0 2,329,710 + AO353_10625 0.37 +1.2 2,329,710 + AO353_10625 0.37 -0.4 2,329,710 + AO353_10625 0.37 -1.0 2,329,710 + AO353_10625 0.37 -1.0 2,329,711 - AO353_10625 0.37 -1.8 2,329,711 - AO353_10625 0.37 +3.1 2,329,711 - AO353_10625 0.37 +2.6 2,329,711 - AO353_10625 0.37 +2.1 2,329,711 - AO353_10625 0.37 +2.9 2,329,711 - AO353_10625 0.37 +0.6 2,329,771 + AO353_10625 0.42 -1.4 2,329,771 + AO353_10625 0.42 +0.1 2,329,814 - AO353_10625 0.45 +1.0 2,329,882 + AO353_10625 0.50 +1.3 2,329,882 + AO353_10625 0.50 +1.1 2,329,882 + AO353_10625 0.50 +0.1 2,329,882 + AO353_10625 0.50 +0.6 2,329,882 + AO353_10625 0.50 +1.6 2,329,882 + AO353_10625 0.50 -1.4 2,329,882 + AO353_10625 0.50 +0.6 2,329,882 + AO353_10625 0.50 -1.0 2,329,882 + AO353_10625 0.50 +2.1 2,329,882 + AO353_10625 0.50 -2.2 2,329,882 + AO353_10625 0.50 +1.6 2,329,882 + AO353_10625 0.50 -0.0 2,329,882 + AO353_10625 0.50 -1.0 2,329,883 - AO353_10625 0.50 +2.9 2,329,883 - AO353_10625 0.50 +3.5 2,329,883 - AO353_10625 0.50 +1.9 2,329,883 - AO353_10625 0.50 +3.1 2,329,883 - AO353_10625 0.50 +1.9 2,329,883 - AO353_10625 0.50 +1.1 2,329,944 - AO353_10625 0.54 +2.3
Or see this region's nucleotide sequence