Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_07500 and AO353_07505 are separated by 107 nucleotides AO353_07505 and AO353_07510 overlap by 4 nucleotides AO353_07510 and AO353_07515 overlap by 8 nucleotides AO353_07515 and AO353_07520 overlap by 8 nucleotides
AO353_07500: AO353_07500 - pyrroloquinoline quinone biosynthesis protein PqqE, at 1,652,303 to 1,652,599
_07500
AO353_07505: AO353_07505 - dethiobiotin synthetase, at 1,652,707 to 1,653,387
_07505
AO353_07510: AO353_07510 - malonyl-[acyl-carrier protein] O-methyltransferase BioC, at 1,653,384 to 1,654,196
_07510
AO353_07515: AO353_07515 - transporter, at 1,654,189 to 1,654,920
_07515
AO353_07520: AO353_07520 - 8-amino-7-oxononanoate synthase, at 1,654,913 to 1,656,091
_07520
Position (kb)
1653
1654
1655 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1652.395 kb on + strand, within AO353_07500 at 1652.395 kb on + strand, within AO353_07500 at 1652.395 kb on + strand, within AO353_07500 at 1652.395 kb on + strand, within AO353_07500 at 1652.396 kb on - strand, within AO353_07500 at 1652.396 kb on - strand, within AO353_07500 at 1652.396 kb on - strand, within AO353_07500 at 1652.396 kb on - strand, within AO353_07500 at 1652.396 kb on - strand, within AO353_07500 at 1652.404 kb on + strand, within AO353_07500 at 1652.404 kb on + strand, within AO353_07500 at 1652.404 kb on + strand, within AO353_07500 at 1652.404 kb on + strand, within AO353_07500 at 1652.404 kb on + strand, within AO353_07500 at 1652.404 kb on + strand, within AO353_07500 at 1652.404 kb on + strand, within AO353_07500 at 1652.404 kb on + strand, within AO353_07500 at 1652.404 kb on + strand, within AO353_07500 at 1652.404 kb on + strand, within AO353_07500 at 1652.405 kb on - strand, within AO353_07500 at 1652.405 kb on - strand, within AO353_07500 at 1652.405 kb on - strand, within AO353_07500 at 1652.405 kb on - strand, within AO353_07500 at 1652.405 kb on - strand, within AO353_07500 at 1652.405 kb on - strand, within AO353_07500 at 1652.405 kb on - strand, within AO353_07500 at 1652.405 kb on - strand, within AO353_07500 at 1652.405 kb on - strand, within AO353_07500 at 1652.407 kb on + strand, within AO353_07500 at 1652.407 kb on + strand, within AO353_07500 at 1652.407 kb on + strand, within AO353_07500 at 1652.407 kb on + strand, within AO353_07500 at 1652.407 kb on + strand, within AO353_07500 at 1652.554 kb on + strand, within AO353_07500 at 1652.554 kb on + strand, within AO353_07500 at 1652.554 kb on + strand, within AO353_07500 at 1652.554 kb on + strand, within AO353_07500 at 1652.555 kb on - strand, within AO353_07500 at 1652.555 kb on - strand, within AO353_07500 at 1652.555 kb on - strand, within AO353_07500 at 1652.571 kb on + strand at 1652.571 kb on + strand at 1652.571 kb on + strand at 1652.571 kb on + strand at 1652.571 kb on + strand at 1652.572 kb on - strand at 1652.572 kb on - strand at 1652.572 kb on - strand at 1652.572 kb on - strand at 1652.572 kb on - strand at 1652.572 kb on - strand at 1652.572 kb on - strand at 1652.697 kb on + strand at 1652.697 kb on + strand at 1652.698 kb on - strand at 1652.698 kb on - strand at 1652.701 kb on + strand at 1652.701 kb on + strand at 1652.701 kb on + strand at 1652.701 kb on + strand at 1652.702 kb on - strand at 1652.702 kb on - strand at 1652.702 kb on - strand at 1652.702 kb on - strand at 1652.702 kb on - strand at 1652.702 kb on - strand at 1652.702 kb on - strand at 1652.856 kb on + strand, within AO353_07505 at 1652.856 kb on + strand, within AO353_07505 at 1652.857 kb on - strand, within AO353_07505 at 1652.857 kb on - strand, within AO353_07505 at 1653.070 kb on + strand, within AO353_07505 at 1653.070 kb on + strand, within AO353_07505 at 1653.070 kb on + strand, within AO353_07505 at 1653.070 kb on + strand, within AO353_07505 at 1653.070 kb on + strand, within AO353_07505 at 1653.070 kb on + strand, within AO353_07505 at 1653.070 kb on + strand, within AO353_07505 at 1653.070 kb on + strand, within AO353_07505 at 1653.070 kb on + strand at 1653.070 kb on + strand, within AO353_07505 at 1653.070 kb on + strand, within AO353_07505 at 1653.070 kb on + strand, within AO353_07505 at 1653.070 kb on + strand, within AO353_07505 at 1653.071 kb on - strand, within AO353_07505 at 1653.071 kb on - strand, within AO353_07505 at 1653.071 kb on - strand, within AO353_07505 at 1653.071 kb on - strand, within AO353_07505 at 1653.071 kb on - strand, within AO353_07505 at 1653.071 kb on - strand, within AO353_07505 at 1653.071 kb on - strand, within AO353_07505 at 1653.071 kb on - strand, within AO353_07505 at 1653.071 kb on - strand, within AO353_07505 at 1653.071 kb on - strand, within AO353_07505 at 1653.071 kb on - strand, within AO353_07505 at 1653.071 kb on - strand, within AO353_07505 at 1653.071 kb on - strand, within AO353_07505 at 1653.071 kb on - strand, within AO353_07505 at 1653.071 kb on - strand, within AO353_07505 at 1653.182 kb on + strand, within AO353_07505 at 1653.182 kb on + strand, within AO353_07505 at 1653.182 kb on + strand, within AO353_07505 at 1653.182 kb on + strand, within AO353_07505 at 1653.182 kb on + strand, within AO353_07505 at 1653.183 kb on - strand, within AO353_07505 at 1653.183 kb on - strand, within AO353_07505 at 1653.183 kb on - strand, within AO353_07505 at 1653.183 kb on - strand, within AO353_07505 at 1653.183 kb on - strand, within AO353_07505 at 1653.183 kb on - strand, within AO353_07505 at 1653.232 kb on - strand, within AO353_07505 at 1653.288 kb on + strand, within AO353_07505 at 1653.316 kb on + strand, within AO353_07505 at 1653.316 kb on + strand, within AO353_07505 at 1653.317 kb on - strand, within AO353_07505 at 1653.317 kb on - strand, within AO353_07505 at 1653.317 kb on - strand, within AO353_07505 at 1653.374 kb on + strand at 1653.374 kb on + strand at 1653.374 kb on + strand at 1653.374 kb on + strand at 1653.374 kb on + strand at 1653.374 kb on + strand at 1653.374 kb on + strand at 1653.375 kb on - strand at 1653.375 kb on - strand at 1653.387 kb on + strand at 1653.387 kb on + strand at 1653.387 kb on + strand at 1653.387 kb on + strand at 1653.387 kb on + strand at 1653.387 kb on + strand at 1653.409 kb on + strand at 1653.409 kb on + strand at 1653.410 kb on - strand at 1653.421 kb on + strand at 1653.422 kb on - strand at 1653.422 kb on - strand at 1653.422 kb on - strand at 1653.460 kb on + strand at 1653.460 kb on + strand at 1653.527 kb on + strand, within AO353_07510 at 1653.527 kb on + strand, within AO353_07510 at 1653.528 kb on - strand, within AO353_07510 at 1653.528 kb on - strand, within AO353_07510 at 1653.564 kb on - strand, within AO353_07510 at 1653.585 kb on + strand, within AO353_07510 at 1653.585 kb on + strand, within AO353_07510 at 1653.585 kb on + strand, within AO353_07510 at 1653.585 kb on + strand, within AO353_07510 at 1653.585 kb on + strand, within AO353_07510 at 1653.586 kb on - strand, within AO353_07510 at 1653.586 kb on - strand, within AO353_07510 at 1653.586 kb on - strand, within AO353_07510 at 1653.586 kb on - strand, within AO353_07510 at 1653.586 kb on - strand, within AO353_07510 at 1653.586 kb on - strand, within AO353_07510 at 1653.646 kb on + strand, within AO353_07510 at 1653.646 kb on + strand, within AO353_07510 at 1653.646 kb on + strand, within AO353_07510 at 1653.646 kb on + strand, within AO353_07510 at 1653.646 kb on + strand, within AO353_07510 at 1653.646 kb on + strand, within AO353_07510 at 1653.646 kb on + strand, within AO353_07510 at 1653.646 kb on + strand, within AO353_07510 at 1653.646 kb on + strand, within AO353_07510 at 1653.646 kb on + strand, within AO353_07510 at 1653.646 kb on + strand, within AO353_07510 at 1653.646 kb on + strand, within AO353_07510 at 1653.646 kb on + strand, within AO353_07510 at 1653.647 kb on - strand, within AO353_07510 at 1653.647 kb on - strand, within AO353_07510 at 1653.647 kb on - strand, within AO353_07510 at 1653.718 kb on + strand, within AO353_07510 at 1653.718 kb on + strand, within AO353_07510 at 1653.718 kb on + strand, within AO353_07510 at 1653.718 kb on + strand, within AO353_07510 at 1653.719 kb on - strand, within AO353_07510 at 1653.719 kb on - strand, within AO353_07510 at 1653.719 kb on - strand, within AO353_07510 at 1653.719 kb on - strand, within AO353_07510 at 1653.725 kb on + strand, within AO353_07510 at 1653.726 kb on - strand, within AO353_07510 at 1653.819 kb on + strand, within AO353_07510 at 1653.820 kb on - strand, within AO353_07510 at 1654.000 kb on + strand, within AO353_07510 at 1654.001 kb on - strand, within AO353_07510 at 1654.001 kb on - strand, within AO353_07510 at 1654.108 kb on + strand, within AO353_07510 at 1654.108 kb on + strand, within AO353_07510 at 1654.108 kb on + strand, within AO353_07510 at 1654.108 kb on + strand, within AO353_07510 at 1654.108 kb on + strand, within AO353_07510 at 1654.108 kb on + strand, within AO353_07510 at 1654.108 kb on + strand, within AO353_07510 at 1654.108 kb on + strand, within AO353_07510 at 1654.108 kb on + strand, within AO353_07510 at 1654.109 kb on - strand, within AO353_07510 at 1654.109 kb on - strand, within AO353_07510 at 1654.109 kb on - strand, within AO353_07510 at 1654.109 kb on - strand, within AO353_07510 at 1654.185 kb on + strand at 1654.185 kb on + strand at 1654.186 kb on - strand at 1654.186 kb on - strand at 1654.306 kb on + strand, within AO353_07515 at 1654.306 kb on + strand, within AO353_07515 at 1654.641 kb on + strand, within AO353_07515 at 1654.769 kb on - strand, within AO353_07515 at 1654.967 kb on + strand at 1654.967 kb on + strand at 1654.967 kb on + strand at 1654.967 kb on + strand at 1654.967 kb on + strand at 1654.967 kb on + strand at 1654.967 kb on + strand at 1654.967 kb on + strand at 1654.967 kb on + strand at 1654.967 kb on + strand at 1654.967 kb on + strand at 1654.967 kb on + strand at 1654.968 kb on - strand at 1654.968 kb on - strand at 1654.968 kb on - strand at 1654.968 kb on - strand at 1654.968 kb on - strand at 1654.968 kb on - strand at 1654.968 kb on - strand at 1654.968 kb on - strand at 1654.968 kb on - strand at 1654.968 kb on - strand at 1654.968 kb on - strand at 1654.973 kb on + strand at 1654.973 kb on + strand at 1654.973 kb on + strand at 1654.973 kb on + strand at 1654.973 kb on + strand at 1654.974 kb on - strand at 1654.974 kb on - strand at 1654.974 kb on - strand at 1654.974 kb on - strand at 1654.974 kb on - strand at 1654.974 kb on - strand at 1654.974 kb on - strand at 1654.974 kb on - strand at 1654.974 kb on - strand at 1654.974 kb on - strand at 1654.974 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 1,652,395 + AO353_07500 0.31 +1.0 1,652,395 + AO353_07500 0.31 -0.7 1,652,395 + AO353_07500 0.31 -1.3 1,652,395 + AO353_07500 0.31 +0.3 1,652,396 - AO353_07500 0.31 +0.8 1,652,396 - AO353_07500 0.31 +0.9 1,652,396 - AO353_07500 0.31 -0.7 1,652,396 - AO353_07500 0.31 +0.3 1,652,396 - AO353_07500 0.31 -0.2 1,652,404 + AO353_07500 0.34 -0.7 1,652,404 + AO353_07500 0.34 +0.0 1,652,404 + AO353_07500 0.34 +0.9 1,652,404 + AO353_07500 0.34 +1.3 1,652,404 + AO353_07500 0.34 -0.3 1,652,404 + AO353_07500 0.34 +1.9 1,652,404 + AO353_07500 0.34 +0.3 1,652,404 + AO353_07500 0.34 -0.4 1,652,404 + AO353_07500 0.34 +1.1 1,652,404 + AO353_07500 0.34 +1.7 1,652,405 - AO353_07500 0.34 -1.1 1,652,405 - AO353_07500 0.34 +0.8 1,652,405 - AO353_07500 0.34 -1.3 1,652,405 - AO353_07500 0.34 +1.1 1,652,405 - AO353_07500 0.34 +0.2 1,652,405 - AO353_07500 0.34 -2.5 1,652,405 - AO353_07500 0.34 -0.7 1,652,405 - AO353_07500 0.34 +1.3 1,652,405 - AO353_07500 0.34 +0.9 1,652,407 + AO353_07500 0.35 +1.9 1,652,407 + AO353_07500 0.35 +0.3 1,652,407 + AO353_07500 0.35 -0.7 1,652,407 + AO353_07500 0.35 -0.8 1,652,407 + AO353_07500 0.35 +0.3 1,652,554 + AO353_07500 0.85 -1.3 1,652,554 + AO353_07500 0.85 +3.1 1,652,554 + AO353_07500 0.85 +1.7 1,652,554 + AO353_07500 0.85 +1.3 1,652,555 - AO353_07500 0.85 +1.3 1,652,555 - AO353_07500 0.85 +0.7 1,652,555 - AO353_07500 0.85 +1.1 1,652,571 + -1.7 1,652,571 + +0.7 1,652,571 + -1.3 1,652,571 + +0.8 1,652,571 + +0.8 1,652,572 - -0.8 1,652,572 - -1.5 1,652,572 - +2.3 1,652,572 - -0.7 1,652,572 - +2.5 1,652,572 - +1.2 1,652,572 - -0.1 1,652,697 + +2.1 1,652,697 + +1.3 1,652,698 - -0.7 1,652,698 - -1.0 1,652,701 + +0.3 1,652,701 + -0.2 1,652,701 + -1.7 1,652,701 + -0.4 1,652,702 - +0.1 1,652,702 - +0.7 1,652,702 - +0.5 1,652,702 - -1.3 1,652,702 - -0.7 1,652,702 - -0.9 1,652,702 - -0.3 1,652,856 + AO353_07505 0.22 -0.7 1,652,856 + AO353_07505 0.22 +0.7 1,652,857 - AO353_07505 0.22 +0.3 1,652,857 - AO353_07505 0.22 +0.3 1,653,070 + AO353_07505 0.53 -2.0 1,653,070 + AO353_07505 0.53 +0.3 1,653,070 + AO353_07505 0.53 +0.3 1,653,070 + AO353_07505 0.53 -0.7 1,653,070 + AO353_07505 0.53 -0.7 1,653,070 + AO353_07505 0.53 -1.3 1,653,070 + AO353_07505 0.53 -1.3 1,653,070 + AO353_07505 0.53 +0.9 1,653,070 + +0.3 1,653,070 + AO353_07505 0.53 -2.3 1,653,070 + AO353_07505 0.53 +0.3 1,653,070 + AO353_07505 0.53 +1.9 1,653,070 + AO353_07505 0.53 -1.3 1,653,071 - AO353_07505 0.53 -0.3 1,653,071 - AO353_07505 0.53 +0.3 1,653,071 - AO353_07505 0.53 -2.1 1,653,071 - AO353_07505 0.53 -0.7 1,653,071 - AO353_07505 0.53 +0.5 1,653,071 - AO353_07505 0.53 -0.7 1,653,071 - AO353_07505 0.53 -1.3 1,653,071 - AO353_07505 0.53 -0.7 1,653,071 - AO353_07505 0.53 -2.0 1,653,071 - AO353_07505 0.53 -0.3 1,653,071 - AO353_07505 0.53 +0.3 1,653,071 - AO353_07505 0.53 -2.5 1,653,071 - AO353_07505 0.53 -0.7 1,653,071 - AO353_07505 0.53 -0.7 1,653,071 - AO353_07505 0.53 +0.8 1,653,182 + AO353_07505 0.70 -1.7 1,653,182 + AO353_07505 0.70 -0.8 1,653,182 + AO353_07505 0.70 -0.9 1,653,182 + AO353_07505 0.70 -1.7 1,653,182 + AO353_07505 0.70 -0.7 1,653,183 - AO353_07505 0.70 +1.3 1,653,183 - AO353_07505 0.70 +0.0 1,653,183 - AO353_07505 0.70 -0.4 1,653,183 - AO353_07505 0.70 +1.7 1,653,183 - AO353_07505 0.70 -1.7 1,653,183 - AO353_07505 0.70 -1.3 1,653,232 - AO353_07505 0.77 +0.3 1,653,288 + AO353_07505 0.85 -1.0 1,653,316 + AO353_07505 0.89 -0.3 1,653,316 + AO353_07505 0.89 -2.3 1,653,317 - AO353_07505 0.90 -0.4 1,653,317 - AO353_07505 0.90 -1.7 1,653,317 - AO353_07505 0.90 -0.7 1,653,374 + +0.3 1,653,374 + +0.3 1,653,374 + -0.7 1,653,374 + -0.1 1,653,374 + -0.3 1,653,374 + +0.0 1,653,374 + -0.3 1,653,375 - -1.3 1,653,375 - +0.7 1,653,387 + +0.2 1,653,387 + +1.1 1,653,387 + +0.9 1,653,387 + +0.9 1,653,387 + -1.0 1,653,387 + -0.7 1,653,409 + -0.1 1,653,409 + -0.3 1,653,410 - -0.7 1,653,421 + +0.7 1,653,422 - +0.3 1,653,422 - +0.3 1,653,422 - -0.8 1,653,460 + -1.0 1,653,460 + +0.8 1,653,527 + AO353_07510 0.18 -0.2 1,653,527 + AO353_07510 0.18 -0.3 1,653,528 - AO353_07510 0.18 -0.7 1,653,528 - AO353_07510 0.18 +0.8 1,653,564 - AO353_07510 0.22 +0.3 1,653,585 + AO353_07510 0.25 -0.3 1,653,585 + AO353_07510 0.25 -0.7 1,653,585 + AO353_07510 0.25 -1.5 1,653,585 + AO353_07510 0.25 -0.7 1,653,585 + AO353_07510 0.25 -0.7 1,653,586 - AO353_07510 0.25 -1.5 1,653,586 - AO353_07510 0.25 +0.3 1,653,586 - AO353_07510 0.25 -0.1 1,653,586 - AO353_07510 0.25 -0.7 1,653,586 - AO353_07510 0.25 -0.8 1,653,586 - AO353_07510 0.25 -1.5 1,653,646 + AO353_07510 0.32 -0.7 1,653,646 + AO353_07510 0.32 -0.5 1,653,646 + AO353_07510 0.32 +0.3 1,653,646 + AO353_07510 0.32 -1.3 1,653,646 + AO353_07510 0.32 -0.1 1,653,646 + AO353_07510 0.32 +0.3 1,653,646 + AO353_07510 0.32 -0.1 1,653,646 + AO353_07510 0.32 +0.5 1,653,646 + AO353_07510 0.32 -0.5 1,653,646 + AO353_07510 0.32 -0.7 1,653,646 + AO353_07510 0.32 -0.7 1,653,646 + AO353_07510 0.32 -1.3 1,653,646 + AO353_07510 0.32 +0.9 1,653,647 - AO353_07510 0.32 +0.6 1,653,647 - AO353_07510 0.32 +0.7 1,653,647 - AO353_07510 0.32 +1.9 1,653,718 + AO353_07510 0.41 +0.3 1,653,718 + AO353_07510 0.41 -1.3 1,653,718 + AO353_07510 0.41 +0.7 1,653,718 + AO353_07510 0.41 -1.3 1,653,719 - AO353_07510 0.41 -0.8 1,653,719 - AO353_07510 0.41 +0.3 1,653,719 - AO353_07510 0.41 -0.7 1,653,719 - AO353_07510 0.41 +0.9 1,653,725 + AO353_07510 0.42 +0.9 1,653,726 - AO353_07510 0.42 -2.5 1,653,819 + AO353_07510 0.54 +0.3 1,653,820 - AO353_07510 0.54 -0.3 1,654,000 + AO353_07510 0.76 +2.7 1,654,001 - AO353_07510 0.76 +0.9 1,654,001 - AO353_07510 0.76 -1.7 1,654,108 + AO353_07510 0.89 -1.7 1,654,108 + AO353_07510 0.89 -1.7 1,654,108 + AO353_07510 0.89 -1.1 1,654,108 + AO353_07510 0.89 -0.7 1,654,108 + AO353_07510 0.89 -0.7 1,654,108 + AO353_07510 0.89 +0.9 1,654,108 + AO353_07510 0.89 -0.7 1,654,108 + AO353_07510 0.89 -0.1 1,654,108 + AO353_07510 0.89 +1.6 1,654,109 - AO353_07510 0.89 -0.5 1,654,109 - AO353_07510 0.89 +0.3 1,654,109 - AO353_07510 0.89 +2.1 1,654,109 - AO353_07510 0.89 -1.3 1,654,185 + -0.3 1,654,185 + +0.3 1,654,186 - -1.0 1,654,186 - +1.3 1,654,306 + AO353_07515 0.16 +0.7 1,654,306 + AO353_07515 0.16 +1.3 1,654,641 + AO353_07515 0.62 +2.9 1,654,769 - AO353_07515 0.79 -0.3 1,654,967 + -0.7 1,654,967 + +0.9 1,654,967 + +0.2 1,654,967 + -1.1 1,654,967 + -0.0 1,654,967 + -1.7 1,654,967 + +0.3 1,654,967 + +0.2 1,654,967 + +1.0 1,654,967 + -2.0 1,654,967 + -0.5 1,654,967 + -1.3 1,654,968 - +1.9 1,654,968 - -0.7 1,654,968 - -1.0 1,654,968 - -1.7 1,654,968 - -1.3 1,654,968 - -1.8 1,654,968 - +0.7 1,654,968 - +0.2 1,654,968 - -2.0 1,654,968 - -1.7 1,654,968 - -0.4 1,654,973 + +0.7 1,654,973 + -0.3 1,654,973 + +0.9 1,654,973 + +0.3 1,654,973 + -1.3 1,654,974 - -1.0 1,654,974 - +0.3 1,654,974 - -1.3 1,654,974 - -0.7 1,654,974 - +1.3 1,654,974 - -1.3 1,654,974 - +0.7 1,654,974 - -1.7 1,654,974 - -0.7 1,654,974 - -0.3 1,654,974 - -0.1
Or see this region's nucleotide sequence