Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_00455 and AO353_00460 are separated by 197 nucleotides AO353_00460 and AO353_00465 are separated by 252 nucleotides AO353_00465 and AO353_00470 are separated by 10 nucleotides
AO353_00455: AO353_00455 - beta-hexosaminidase, at 92,743 to 93,753
_00455
AO353_00460: AO353_00460 - TetR family transcriptional regulator, at 93,951 to 94,658
_00460
AO353_00465: AO353_00465 - LexA family transcriptional regulator, at 94,911 to 95,519
_00465
AO353_00470: AO353_00470 - CDP-glycerol--UDP-pyrophosphoryl-N- acetylglucosaminyl-N-acetylmannosamine glycerophosphotransferase, at 95,530 to 96,003
_00470
Position (kb)
93
94
95 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 93.037 kb on + strand, within AO353_00455 at 93.038 kb on - strand, within AO353_00455 at 93.107 kb on + strand, within AO353_00455 at 93.467 kb on + strand, within AO353_00455 at 93.468 kb on - strand, within AO353_00455 at 93.840 kb on - strand at 93.843 kb on - strand at 93.864 kb on - strand at 93.910 kb on + strand at 93.924 kb on + strand at 93.924 kb on + strand at 93.924 kb on + strand at 93.925 kb on - strand at 93.925 kb on - strand at 93.925 kb on - strand at 93.925 kb on - strand at 93.925 kb on - strand at 93.925 kb on - strand at 93.952 kb on + strand at 93.953 kb on - strand at 93.953 kb on - strand at 93.953 kb on - strand at 93.953 kb on - strand at 94.209 kb on - strand, within AO353_00460 at 94.241 kb on - strand, within AO353_00460 at 94.241 kb on - strand, within AO353_00460 at 94.252 kb on - strand, within AO353_00460 at 94.262 kb on - strand, within AO353_00460 at 94.262 kb on - strand, within AO353_00460 at 94.262 kb on - strand, within AO353_00460 at 94.262 kb on - strand, within AO353_00460 at 94.335 kb on - strand, within AO353_00460 at 94.693 kb on + strand at 94.693 kb on + strand at 94.693 kb on + strand at 94.694 kb on - strand at 94.694 kb on - strand at 94.694 kb on - strand at 94.694 kb on - strand at 94.752 kb on + strand at 94.752 kb on + strand at 94.752 kb on + strand at 94.752 kb on + strand at 94.752 kb on + strand at 94.752 kb on + strand at 94.752 kb on + strand at 94.752 kb on + strand at 94.752 kb on + strand at 94.752 kb on + strand at 94.753 kb on - strand at 94.753 kb on - strand at 94.753 kb on - strand at 94.753 kb on - strand at 94.753 kb on - strand at 94.753 kb on - strand at 94.753 kb on - strand at 94.756 kb on + strand at 94.756 kb on + strand at 94.757 kb on - strand at 94.757 kb on - strand at 94.762 kb on + strand at 94.762 kb on + strand at 94.762 kb on + strand at 94.762 kb on + strand at 94.762 kb on + strand at 94.762 kb on + strand at 94.762 kb on + strand at 94.763 kb on - strand at 94.788 kb on + strand at 94.788 kb on + strand at 94.788 kb on + strand at 94.788 kb on + strand at 94.788 kb on + strand at 94.789 kb on - strand at 94.789 kb on - strand at 94.789 kb on - strand at 94.812 kb on + strand at 94.813 kb on - strand at 94.813 kb on - strand at 94.813 kb on - strand at 94.836 kb on + strand at 94.836 kb on + strand at 94.836 kb on + strand at 94.870 kb on - strand at 94.871 kb on + strand at 94.871 kb on + strand at 94.873 kb on + strand at 94.873 kb on + strand at 95.518 kb on - strand at 95.530 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 93,037 + AO353_00455 0.29 +1.2 93,038 - AO353_00455 0.29 +0.3 93,107 + AO353_00455 0.36 +0.8 93,467 + AO353_00455 0.72 +2.1 93,468 - AO353_00455 0.72 +0.3 93,840 - +0.8 93,843 - +0.8 93,864 - +0.5 93,910 + -1.4 93,924 + +0.4 93,924 + +1.8 93,924 + +2.1 93,925 - -1.8 93,925 - +0.2 93,925 - +2.1 93,925 - +1.1 93,925 - -0.2 93,925 - +0.4 93,952 + -0.5 93,953 - +1.2 93,953 - -2.0 93,953 - +0.4 93,953 - +1.0 94,209 - AO353_00460 0.36 +1.1 94,241 - AO353_00460 0.41 -1.8 94,241 - AO353_00460 0.41 -1.2 94,252 - AO353_00460 0.43 -1.2 94,262 - AO353_00460 0.44 -2.5 94,262 - AO353_00460 0.44 -1.8 94,262 - AO353_00460 0.44 +0.5 94,262 - AO353_00460 0.44 +0.1 94,335 - AO353_00460 0.54 +0.8 94,693 + -1.2 94,693 + -0.8 94,693 + -1.8 94,694 - -0.9 94,694 - +0.4 94,694 - +0.6 94,694 - -0.8 94,752 + +2.4 94,752 + -1.2 94,752 + +0.8 94,752 + -1.8 94,752 + -1.2 94,752 + +0.8 94,752 + +1.4 94,752 + +0.8 94,752 + -0.2 94,752 + +0.8 94,753 - -0.2 94,753 - +1.7 94,753 - +2.1 94,753 - -0.1 94,753 - +2.9 94,753 - +0.1 94,753 - +1.4 94,756 + +1.4 94,756 + +0.4 94,757 - +0.8 94,757 - -1.8 94,762 + -1.2 94,762 + -0.2 94,762 + -0.2 94,762 + +0.8 94,762 + -1.2 94,762 + +0.2 94,762 + -0.2 94,763 - -2.5 94,788 + -0.2 94,788 + +0.8 94,788 + -0.2 94,788 + -1.2 94,788 + +0.4 94,789 - +1.4 94,789 - +1.1 94,789 - +0.7 94,812 + +0.1 94,813 - -0.2 94,813 - +1.0 94,813 - +0.4 94,836 + -1.2 94,836 + -0.2 94,836 + +0.4 94,870 - +2.1 94,871 + +1.6 94,871 + -2.2 94,873 + +0.2 94,873 + -0.5 95,518 - -0.8 95,530 - -1.5
Or see this region's nucleotide sequence