Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_3126
Experiment: MoYLS4 with nitrite 0.625 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with nitrite 0.625 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,945,944 | + | -0.2 | |||
3,947,774 | + | +0.0 | |||
3,947,784 | + | -0.2 | |||
3,947,922 | + | +0.1 | |||
3,948,021 | + | DvMF_3127 | 0.17 | -0.9 | |
3,948,029 | - | DvMF_3127 | 0.18 | -0.6 | |
3,948,029 | - | DvMF_3127 | 0.18 | -0.5 | |
3,948,132 | - | DvMF_3127 | 0.35 | -0.6 | |
3,948,280 | - | DvMF_3127 | 0.59 | -1.3 | |
3,948,285 | - | DvMF_3127 | 0.60 | -0.4 | |
3,948,350 | + | DvMF_3127 | 0.70 | -2.2 | |
3,948,377 | - | DvMF_3127 | 0.74 | -0.6 | |
3,948,428 | + | DvMF_3127 | 0.83 | -1.2 | |
3,948,460 | + | DvMF_3127 | 0.88 | -0.8 |
Or see this region's nucleotide sequence