Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2097
Experiment: MoYLS4 with nitrite 0.625 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with nitrite 0.625 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,612,550 | + | -0.2 | |||
2,612,649 | + | DvMF_2096 | 0.17 | -2.8 | |
2,612,682 | - | DvMF_2096 | 0.27 | -0.5 | |
2,613,064 | - | -0.1 | |||
2,613,168 | - | -0.1 | |||
2,613,541 | - | -0.6 | |||
2,613,543 | + | -0.7 | |||
2,613,718 | - | DvMF_2097 | 0.32 | -0.5 | |
2,614,104 | - | DvMF_2097 | 0.87 | -0.6 | |
2,614,199 | - | -0.4 | |||
2,614,206 | + | -0.2 | |||
2,614,232 | - | -0.4 | |||
2,614,241 | - | -0.2 | |||
2,614,328 | - | -0.5 | |||
2,614,534 | - | -0.3 | |||
2,614,712 | + | DvMF_2098 | 0.17 | +1.0 | |
2,614,795 | + | DvMF_2098 | 0.23 | -0.3 | |
2,614,803 | - | DvMF_2098 | 0.23 | -0.4 | |
2,614,803 | - | DvMF_2098 | 0.23 | -0.1 | |
2,615,104 | + | DvMF_2098 | 0.45 | -0.7 | |
2,615,137 | - | DvMF_2098 | 0.47 | -0.1 |
Or see this region's nucleotide sequence