Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1357
Experiment: MoYLS4 with nitrite 0.625 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with nitrite 0.625 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 1,660,164 | - | -0.4 | |||
| 1,660,307 | - | DvMF_1357 | 0.11 | -0.5 | |
| 1,660,413 | + | DvMF_1357 | 0.23 | -0.7 | |
| 1,660,649 | + | DvMF_1357 | 0.51 | -0.6 | |
| 1,660,658 | + | DvMF_1357 | 0.52 | -0.6 | |
| 1,660,745 | - | DvMF_1357 | 0.63 | -0.8 | |
| 1,660,747 | + | DvMF_1357 | 0.63 | -0.2 | |
| 1,661,250 | - | +0.2 | |||
| 1,661,501 | + | DvMF_1358 | 0.26 | -0.4 | |
| 1,661,545 | - | DvMF_1358 | 0.29 | +0.1 | |
| 1,661,545 | - | DvMF_1358 | 0.29 | -0.1 | |
| 1,661,545 | - | DvMF_1358 | 0.29 | +0.4 | |
| 1,661,824 | + | DvMF_1358 | 0.51 | -0.2 | |
| 1,662,013 | + | DvMF_1358 | 0.66 | -0.0 |
Or see this region's nucleotide sequence