Strain Fitness in Shewanella loihica PV-4 around Shew_2274

Experiment: L-Malic (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Malic (C)
2,656,236	+				-0.7
2,656,263	-				+0.2
2,656,263	-				+0.3
2,656,281	+				+0.7
2,656,281	+				-0.6
2,656,281	+				+1.0
2,656,281	+				+1.3
2,656,287	+				-0.9
2,656,289	-				+0.1
2,656,295	-				+0.2
2,656,295	-				+0.3
2,656,308	+				+1.1
2,656,369	+				-0.2
2,656,399	-				-0.1
2,656,440	+				+0.8
2,656,471	+				+1.1
2,656,478	-				+1.0
2,656,478	-				-2.2
2,656,479	-				+0.0
2,656,479	-				-0.5
2,656,479	-				+1.0
2,656,502	-				-0.9
2,656,537	-				+0.6
2,656,537	-				+0.0
2,656,564	+				+0.2
2,656,566	+				+0.4
2,656,566	+				+0.1
2,656,566	+				+1.0
2,656,574	-				+0.8
2,656,574	-				-0.2
2,656,615	-		Shew_2274	0.11	-0.6
2,656,656	+		Shew_2274	0.13	+0.3
2,656,656	+		Shew_2274	0.13	+0.7
2,656,662	-		Shew_2274	0.13	+0.1
2,656,664	-		Shew_2274	0.14	+1.5
2,656,664	-		Shew_2274	0.14	+1.2
2,656,699	-		Shew_2274	0.16	+0.8
2,656,701	+		Shew_2274	0.16	-0.0
2,656,701	+		Shew_2274	0.16	+0.9
2,656,701	+		Shew_2274	0.16	-1.2
2,656,701	+		Shew_2274	0.16	+0.1
2,656,701	+		Shew_2274	0.16	-1.2
2,656,701	+		Shew_2274	0.16	+0.1
2,656,701	+		Shew_2274	0.16	+0.1
2,656,701	+		Shew_2274	0.16	+0.6
2,656,709	-		Shew_2274	0.16	+1.0
2,656,709	-		Shew_2274	0.16	+1.2
2,656,709	-		Shew_2274	0.16	-0.5
2,656,709	-		Shew_2274	0.16	-2.2
2,656,709	-		Shew_2274	0.16	-0.3
2,656,709	-		Shew_2274	0.16	+0.2
2,656,709	-		Shew_2274	0.16	+2.8
2,656,711	+		Shew_2274	0.16	-0.7
2,656,711	+		Shew_2274	0.16	-0.0
2,656,711	+		Shew_2274	0.16	+0.1
2,656,711	+		Shew_2274	0.16	+0.4
2,656,711	+		Shew_2274	0.16	+2.5
2,656,719	-		Shew_2274	0.17	+0.7
2,656,719	-		Shew_2274	0.17	+0.7
2,656,719	-		Shew_2274	0.17	+1.0
2,656,719	-		Shew_2274	0.17	+0.7
2,656,719	-		Shew_2274	0.17	+0.2
2,656,719	-		Shew_2274	0.17	+2.7
2,656,719	-		Shew_2274	0.17	+1.5
2,656,722	+		Shew_2274	0.17	+1.1
2,656,723	+		Shew_2274	0.17	-2.6
2,656,723	+		Shew_2274	0.17	-0.3
2,656,723	+		Shew_2274	0.17	+1.7
2,656,723	+		Shew_2274	0.17	+0.2
2,656,723	+		Shew_2274	0.17	+1.4
2,656,723	+		Shew_2274	0.17	+0.8
2,656,723	+		Shew_2274	0.17	+0.9
2,656,723	+		Shew_2274	0.17	+2.5
2,656,723	+		Shew_2274	0.17	+1.0
2,656,723	+		Shew_2274	0.17	+0.3
2,656,723	+		Shew_2274	0.17	+1.2
2,656,723	+		Shew_2274	0.17	+1.7
2,656,723	+		Shew_2274	0.17	-1.9
2,656,723	+		Shew_2274	0.17	+0.3
2,656,723	+		Shew_2274	0.17	-1.0
2,656,723	+		Shew_2274	0.17	+0.6
2,656,723	+		Shew_2274	0.17	+0.6
2,656,723	+		Shew_2274	0.17	+1.0
2,656,723	+		Shew_2274	0.17	+0.6
2,656,729	-		Shew_2274	0.17	-0.3
2,656,731	-		Shew_2274	0.17	+0.2
2,656,731	-		Shew_2274	0.17	-1.9
2,656,731	-		Shew_2274	0.17	+1.0
2,656,731	-		Shew_2274	0.17	+0.7
2,656,731	-		Shew_2274	0.17	+0.2
2,656,731	-		Shew_2274	0.17	+0.5
2,656,731	-		Shew_2274	0.17	+0.7
2,656,731	-		Shew_2274	0.17	-0.0
2,656,731	-		Shew_2274	0.17	+0.5
2,656,731	-		Shew_2274	0.17	+1.1
2,656,731	-		Shew_2274	0.17	+0.1
2,656,731	-		Shew_2274	0.17	+2.9
2,656,731	-		Shew_2274	0.17	+0.7
2,656,731	-		Shew_2274	0.17	-0.9
2,656,731	-		Shew_2274	0.17	+1.5
2,656,731	-		Shew_2274	0.17	+0.5
2,656,731	-		Shew_2274	0.17	-0.2
2,656,731	-		Shew_2274	0.17	-0.9
2,656,731	-		Shew_2274	0.17	+0.1
2,656,731	-		Shew_2274	0.17	-0.2
2,656,773	+		Shew_2274	0.20	+0.7
2,656,773	+		Shew_2274	0.20	+0.1
2,656,773	+		Shew_2274	0.20	-0.9
2,656,773	+		Shew_2274	0.20	+2.0
2,656,773	+		Shew_2274	0.20	+0.7
2,656,773	+		Shew_2274	0.20	+1.5
2,656,773	+		Shew_2274	0.20	+0.4
2,656,773	+		Shew_2274	0.20	+1.0
2,656,773	+		Shew_2274	0.20	+2.5
2,656,780	+		Shew_2274	0.20	+0.4
2,656,781	-		Shew_2274	0.20	+1.0
2,656,781	-		Shew_2274	0.20	-1.4
2,656,890	+		Shew_2274	0.26	+1.3
2,656,900	+		Shew_2274	0.27	+0.1
2,656,907	-		Shew_2274	0.27	+0.0
2,656,946	+		Shew_2274	0.29	-1.0
2,656,946	+		Shew_2274	0.29	+0.3
2,656,953	+		Shew_2274	0.30	+0.4
2,656,953	+		Shew_2274	0.30	+1.1
2,656,954	-		Shew_2274	0.30	+0.5
2,657,003	+		Shew_2274	0.32	+0.1
2,657,021	-		Shew_2274	0.33	+1.1
2,657,035	+		Shew_2274	0.34	+0.3
2,657,035	+		Shew_2274	0.34	+2.3
2,657,035	+		Shew_2274	0.34	+0.1
2,657,103	+		Shew_2274	0.38	+3.8
2,657,111	+		Shew_2274	0.38	+1.2
2,657,120	-		Shew_2274	0.39	+0.7
2,657,120	-		Shew_2274	0.39	+1.1
2,657,143	+		Shew_2274	0.40	+0.3
2,657,149	+		Shew_2274	0.40	+0.4
2,657,157	-		Shew_2274	0.41	+4.1
2,657,168	-		Shew_2274	0.41	+1.6
2,657,168	-		Shew_2274	0.41	-0.5
2,657,181	+		Shew_2274	0.42	+1.9
2,657,181	+		Shew_2274	0.42	-1.3
2,657,189	-		Shew_2274	0.43	+0.5
2,657,189	-		Shew_2274	0.43	+0.7
2,657,189	-		Shew_2274	0.43	+0.9
2,657,189	-		Shew_2274	0.43	+1.1
2,657,189	-		Shew_2274	0.43	-0.9
2,657,189	-		Shew_2274	0.43	-0.6
2,657,189	-		Shew_2274	0.43	+0.7
2,657,190	-		Shew_2274	0.43	+1.6
2,657,190	-		Shew_2274	0.43	+0.9
2,657,207	+		Shew_2274	0.44	+1.3
2,657,207	+		Shew_2274	0.44	-0.0
2,657,215	-		Shew_2274	0.44	+2.6
2,657,215	-		Shew_2274	0.44	+0.1
2,657,223	-		Shew_2274	0.44	+2.6
2,657,243	+		Shew_2274	0.46	+1.0
2,657,289	-		Shew_2274	0.48	+2.7
2,657,317	-		Shew_2274	0.50	+1.7
2,657,329	-		Shew_2274	0.50	+0.3
2,657,342	+		Shew_2274	0.51	+1.1
2,657,342	+		Shew_2274	0.51	+0.1
2,657,350	+		Shew_2274	0.52	-0.6
2,657,351	-		Shew_2274	0.52	+1.1
2,657,363	-		Shew_2274	0.52	+0.1
2,657,363	-		Shew_2274	0.52	+0.1
2,657,372	-		Shew_2274	0.53	+3.0
2,657,372	-		Shew_2274	0.53	-0.0
2,657,392	+		Shew_2274	0.54	+0.8
2,657,396	+		Shew_2274	0.54	+1.5
2,657,397	+		Shew_2274	0.54	-1.2
2,657,397	+		Shew_2274	0.54	+1.1
2,657,400	-		Shew_2274	0.54	+2.1
2,657,400	-		Shew_2274	0.54	-3.3
2,657,400	-		Shew_2274	0.54	+0.0
2,657,405	-		Shew_2274	0.55	-0.6
2,657,429	+		Shew_2274	0.56	+2.1
2,657,446	-		Shew_2274	0.57	+2.1
2,657,446	-		Shew_2274	0.57	+1.3
2,657,490	+		Shew_2274	0.59	-2.2
2,657,500	+		Shew_2274	0.60	+0.9
2,657,500	+		Shew_2274	0.60	+1.1
2,657,500	+		Shew_2274	0.60	-0.4
2,657,500	+		Shew_2274	0.60	+0.9
2,657,500	+		Shew_2274	0.60	+0.7
2,657,500	+		Shew_2274	0.60	+2.5
2,657,500	+		Shew_2274	0.60	+1.3
2,657,500	+		Shew_2274	0.60	-0.9
2,657,508	-		Shew_2274	0.60	+1.7
2,657,508	-		Shew_2274	0.60	+1.3
2,657,508	-		Shew_2274	0.60	+0.0
2,657,550	+		Shew_2274	0.63	-0.0
2,657,550	+		Shew_2274	0.63	+1.7
2,657,550	+		Shew_2274	0.63	+1.9
2,657,550	+		Shew_2274	0.63	+1.3
2,657,558	-		Shew_2274	0.63	+0.1
2,657,558	-		Shew_2274	0.63	-2.2
2,657,558	-		Shew_2274	0.63	+0.1
2,657,558	-		Shew_2274	0.63	+0.8
2,657,675	+		Shew_2274	0.69	-1.1
2,657,675	+		Shew_2274	0.69	-0.0
2,657,683	-		Shew_2274	0.70	+1.6
2,657,685	+		Shew_2274	0.70	+0.4
2,657,685	+		Shew_2274	0.70	+0.1
2,657,685	+		Shew_2274	0.70	+0.6
2,657,685	+		Shew_2274	0.70	-0.9
2,657,685	+		Shew_2274	0.70	+1.0
2,657,685	+		Shew_2274	0.70	+1.7
2,657,685	+		Shew_2274	0.70	+1.1
2,657,685	+		Shew_2274	0.70	+0.6
2,657,685	+		Shew_2274	0.70	-0.3
2,657,685	+		Shew_2274	0.70	+2.1
2,657,685	+		Shew_2274	0.70	-0.3
2,657,685	+		Shew_2274	0.70	+1.6
2,657,685	+		Shew_2274	0.70	+1.9
2,657,685	+		Shew_2274	0.70	-1.4
2,657,693	-		Shew_2274	0.70	-1.4
2,657,693	-		Shew_2274	0.70	-0.4
2,657,693	-		Shew_2274	0.70	+0.1
2,657,693	-		Shew_2274	0.70	+1.2
2,657,751	-		Shew_2274	0.74	-0.1
2,657,767	-		Shew_2274	0.75	+0.7
2,657,796	-		Shew_2274	0.76	-0.1
2,657,815	+		Shew_2274	0.77	-0.1
2,657,816	-		Shew_2274	0.77	+0.2
2,657,816	+		Shew_2274	0.77	-1.0
2,657,824	-		Shew_2274	0.78	+1.2
2,657,824	-		Shew_2274	0.78	-0.9
2,657,848	-		Shew_2274	0.79	-1.9
2,657,848	+		Shew_2274	0.79	+0.1
2,657,848	-		Shew_2274	0.79	+1.1
2,657,848	+		Shew_2274	0.79	+0.1
2,657,848	+		Shew_2274	0.79	-1.3
2,657,856	-		Shew_2274	0.79	+0.1
2,657,856	-		Shew_2274	0.79	+0.6
2,657,895	+		Shew_2274	0.82	+0.7
2,657,903	+		Shew_2274	0.82	-0.3
2,657,910	-		Shew_2274	0.82	+0.1
2,657,911	-		Shew_2274	0.83	+1.4
2,657,914	+		Shew_2274	0.83	+1.7
2,657,914	+		Shew_2274	0.83	-0.7
2,657,914	+		Shew_2274	0.83	+0.4
2,657,914	+		Shew_2274	0.83	+0.1
2,657,914	+		Shew_2274	0.83	+2.4
2,657,914	+		Shew_2274	0.83	+1.4
2,657,914	+		Shew_2274	0.83	+0.7
2,657,914	+		Shew_2274	0.83	+1.1
2,657,922	+		Shew_2274	0.83	-0.3
2,657,922	-		Shew_2274	0.83	-0.9
2,657,922	-		Shew_2274	0.83	+1.7
2,657,930	-		Shew_2274	0.84	+1.4
2,657,930	-		Shew_2274	0.84	-1.4
2,657,932	+		Shew_2274	0.84	+0.5
2,657,932	+		Shew_2274	0.84	+1.2
2,657,984	+		Shew_2274	0.87	+0.8
2,657,984	+		Shew_2274	0.87	-1.4
2,657,984	+		Shew_2274	0.87	+0.3
2,657,984	+		Shew_2274	0.87	-0.5
2,657,984	+		Shew_2274	0.87	-0.2
2,657,989	+		Shew_2274	0.87	-0.6
2,657,992	-		Shew_2274	0.87	+1.5
2,657,992	-		Shew_2274	0.87	+0.8
2,657,992	-		Shew_2274	0.87	+0.7
2,658,002	-		Shew_2274	0.88	+4.6
2,658,002	-		Shew_2274	0.88	-0.1
2,658,004	+		Shew_2274	0.88	+0.2
2,658,004	+		Shew_2274	0.88	+1.4
2,658,004	+		Shew_2274	0.88	+0.2
2,658,004	+		Shew_2274	0.88	+0.2
2,658,013	+		Shew_2274	0.88	+0.6
2,658,026	+		Shew_2274	0.89	+0.1
2,658,027	+		Shew_2274	0.89	+0.3
2,658,027	+		Shew_2274	0.89	-0.7
2,658,027	+		Shew_2274	0.89	-0.4
2,658,027	+		Shew_2274	0.89	-1.0
2,658,027	+		Shew_2274	0.89	+1.3
2,658,027	+		Shew_2274	0.89	-0.8
2,658,032	+		Shew_2274	0.89	-2.4
2,658,033	+		Shew_2274	0.89	+0.7
2,658,033	+		Shew_2274	0.89	-0.3
2,658,033	+		Shew_2274	0.89	-0.4
2,658,034	-		Shew_2274	0.89	+1.4
2,658,034	-		Shew_2274	0.89	-0.8
2,658,034	-		Shew_2274	0.89	+1.5
2,658,034	+		Shew_2274	0.89	+1.2
2,658,035	-		Shew_2274	0.89	+1.7
2,658,035	-		Shew_2274	0.89	+1.9
2,658,035	-		Shew_2274	0.89	-1.8
2,658,035	-		Shew_2274	0.89	+0.3
2,658,041	-		Shew_2274	0.90	+0.2
2,658,046	-				-1.8
2,658,094	+				-0.6
2,658,197	+				+0.1
2,658,211	+				-0.8
2,658,242	+				-0.3
2,658,242	+				+0.0
2,658,242	+				-0.1
2,658,252	+				-0.6
2,658,252	+				-2.4
2,658,252	+				-0.2
2,658,252	+				-0.2
2,658,252	+				-0.5
2,658,252	+				+0.1
2,658,252	+				+0.2
2,658,260	-				-0.2
2,658,260	-				+0.1
2,658,260	-				+0.8
2,658,260	-				+1.5
2,658,260	-				-1.8
2,658,260	-				-0.2
2,658,260	-				+0.0
2,658,260	-				-0.7
2,658,268	+				-0.4
2,658,268	+				+0.2
2,658,268	+				-1.4
2,658,268	+				+0.7
2,658,272	-				-0.3
2,658,273	+				+0.8
2,658,276	-				-2.0
2,658,276	-				-0.2
2,658,279	+				+0.5
2,658,279	+				-0.4
2,658,279	+				+0.2
2,658,279	+				-0.4
2,658,279	+				-0.4
2,658,281	-				+0.8
2,658,287	+				-2.4
2,658,287	-				+0.2
2,658,287	-				-0.2
2,658,287	-				-0.3
2,658,288	+				-3.2
2,658,309	+				+1.5
2,658,328	-				-0.8
2,658,328	-				+0.0
2,658,352	+		Shew_2275	0.11	-0.3
2,658,352	-		Shew_2275	0.11	-0.1
2,658,357	+		Shew_2275	0.12	-0.7
2,658,357	+		Shew_2275	0.12	-0.2
2,658,357	+		Shew_2275	0.12	+0.3
2,658,357	+		Shew_2275	0.12	-0.2
2,658,365	-		Shew_2275	0.13	+0.8
2,658,365	-		Shew_2275	0.13	+0.2
2,658,370	-		Shew_2275	0.14	-1.1
2,658,370	-		Shew_2275	0.14	+0.6
2,658,370	-		Shew_2275	0.14	-0.5
2,658,370	-		Shew_2275	0.14	+0.0
2,658,403	+		Shew_2275	0.18	-0.8
2,658,406	-		Shew_2275	0.18	-0.3
2,658,504	+		Shew_2275	0.30	-0.4
2,658,667	+		Shew_2275	0.51	+0.3
2,658,752	+		Shew_2275	0.62	+1.1
2,658,809	+		Shew_2275	0.69	+0.0
2,658,809	+		Shew_2275	0.69	+0.1
2,659,078	+				+0.1
2,659,097	+				+0.6
2,659,105	-				-0.1
2,659,105	-				+0.3
2,659,105	-				-0.2
2,659,112	+				+0.0