Strain Fitness in Shewanella loihica PV-4 around Shew_2271

Experiment: L-Malic (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Malic (C)
2,651,275	+				-1.2
2,651,472	-				-0.3
2,651,489	+				+0.0
2,651,613	-				+0.2
2,651,613	-				+0.9
2,651,876	+				-0.7
2,651,884	-				+0.1
2,652,034	+				-1.4
2,652,034	+				+0.0
2,652,034	+				+0.0
2,652,034	+				+0.5
2,652,034	+				-0.6
2,652,034	+				-0.2
2,652,042	-				-0.9
2,652,042	-				-0.1
2,652,042	-				-0.4
2,652,042	-				+0.1
2,652,042	-				-0.7
2,652,042	-				+0.4
2,652,042	-				+0.1
2,652,061	-				+0.7
2,652,061	-				+1.1
2,652,061	-				+0.1
2,652,061	-				-2.9
2,652,061	-				+0.5
2,652,246	+				+1.0
2,652,262	+				-3.3
2,652,262	+				-0.2
2,652,262	+				+0.2
2,652,270	-				+0.5
2,652,270	-				-0.3
2,652,270	-				+0.3
2,652,270	-				+0.8
2,652,270	-				-1.0
2,652,270	-				+0.6
2,652,336	-		Shew_2271	0.11	+0.9
2,652,375	-		Shew_2271	0.14	-0.2
2,652,423	+		Shew_2271	0.16	+0.4
2,652,464	+		Shew_2271	0.19	-0.2
2,652,472	-		Shew_2271	0.20	+0.4
2,652,480	+		Shew_2271	0.20	+2.8
2,652,512	-		Shew_2271	0.22	+0.1
2,652,567	+		Shew_2271	0.25	-0.4
2,652,567	+		Shew_2271	0.25	-0.0
2,652,567	+		Shew_2271	0.25	-0.9
2,652,569	+		Shew_2271	0.25	-0.6
2,652,611	+		Shew_2271	0.28	-0.2
2,652,632	+		Shew_2271	0.29	+0.5
2,652,676	+		Shew_2271	0.32	-0.4
2,652,681	+		Shew_2271	0.32	+0.4
2,652,684	-		Shew_2271	0.33	-0.4
2,652,689	-		Shew_2271	0.33	+0.5
2,652,689	-		Shew_2271	0.33	+0.3
2,652,712	+		Shew_2271	0.34	-0.6
2,652,712	+		Shew_2271	0.34	-0.1
2,652,720	-		Shew_2271	0.35	+0.9
2,652,772	+		Shew_2271	0.38	-0.7
2,652,811	+		Shew_2271	0.40	+0.0
2,652,874	+		Shew_2271	0.44	-0.9
2,652,874	+		Shew_2271	0.44	-1.4
2,652,877	-		Shew_2271	0.45	-2.2
2,652,877	-		Shew_2271	0.45	+0.1
2,652,877	-		Shew_2271	0.45	-0.2
2,652,882	-		Shew_2271	0.45	+0.4
2,652,882	-		Shew_2271	0.45	+0.6
2,652,882	-		Shew_2271	0.45	+0.7
2,652,883	-		Shew_2271	0.45	+0.4
2,652,893	+		Shew_2271	0.45	-0.2
2,652,893	+		Shew_2271	0.45	-0.2
2,652,893	+		Shew_2271	0.45	+0.2
2,652,893	+		Shew_2271	0.45	-0.3
2,652,901	-		Shew_2271	0.46	+0.1
2,652,901	-		Shew_2271	0.46	+1.1
2,652,901	-		Shew_2271	0.46	+0.5
2,652,901	-		Shew_2271	0.46	-1.6
2,652,903	+		Shew_2271	0.46	+0.1
2,652,906	-		Shew_2271	0.46	+0.6
2,652,906	-		Shew_2271	0.46	+0.7
2,652,917	+		Shew_2271	0.47	+0.4
2,652,918	-		Shew_2271	0.47	-0.4
2,652,971	+		Shew_2271	0.50	-0.8
2,652,989	+		Shew_2271	0.51	-1.0
2,652,997	-		Shew_2271	0.52	+0.4
2,653,061	-		Shew_2271	0.56	+0.7
2,653,105	-		Shew_2271	0.59	+0.7
2,653,109	+		Shew_2271	0.59	+1.1
2,653,114	+		Shew_2271	0.59	+0.5
2,653,114	+		Shew_2271	0.59	-1.1
2,653,117	-		Shew_2271	0.59	+0.4
2,653,178	-		Shew_2271	0.63	+0.1
2,653,194	+		Shew_2271	0.64	-1.4
2,653,194	+		Shew_2271	0.64	-0.6
2,653,195	+		Shew_2271	0.64	+0.1
2,653,203	-		Shew_2271	0.65	-0.0
2,653,207	+		Shew_2271	0.65	+0.2
2,653,214	-		Shew_2271	0.65	+0.9
2,653,214	-		Shew_2271	0.65	-0.3
2,653,237	-		Shew_2271	0.67	-0.5
2,653,309	+		Shew_2271	0.71	+2.3
2,653,316	+		Shew_2271	0.72	-1.4
2,653,342	+		Shew_2271	0.73	+0.1
2,653,342	+		Shew_2271	0.73	-1.1
2,653,342	+		Shew_2271	0.73	+0.1
2,653,349	-		Shew_2271	0.74	+2.1
2,653,359	-		Shew_2271	0.74	+1.7
2,653,369	-		Shew_2271	0.75	+2.5
2,653,385	+		Shew_2271	0.76	-0.9
2,653,385	+		Shew_2271	0.76	+0.1
2,653,385	+		Shew_2271	0.76	+0.4
2,653,393	-		Shew_2271	0.76	+0.0
2,653,393	-		Shew_2271	0.76	-1.1
2,653,501	+		Shew_2271	0.83	+0.6
2,653,590	-		Shew_2271	0.89	+0.2
2,653,598	-		Shew_2271	0.89	+1.6
2,653,608	-		Shew_2271	0.90	+0.6
2,653,620	-				-0.6
2,653,669	+				+0.7
2,653,714	-				+0.9
2,653,714	-				-0.7
2,653,714	-				-1.4
2,653,744	+				+0.9
2,653,823	-				-0.2
2,653,825	+				-0.8
2,653,825	+				-0.5
2,653,825	+				-0.2
2,653,825	+				+1.3
2,653,825	+				+0.2
2,653,825	+				-1.1
2,653,825	+				+0.5
2,653,825	+				-0.8
2,653,825	+				-0.5
2,653,825	+				+0.6
2,653,825	+				+0.5
2,653,825	+				+0.5
2,653,825	+				-0.4
2,653,833	+				+0.1
2,653,833	+				+0.5
2,653,833	+				-1.1
2,653,833	-				+0.2
2,653,833	-				-0.7
2,653,833	-				+2.5
2,653,833	-				+1.2
2,653,833	+				+1.2
2,653,833	+				-0.0
2,653,841	+				-0.5
2,653,843	+				-0.4
2,653,853	-		Shew_2272	0.10	+1.7
2,653,856	-		Shew_2272	0.11	+0.3
2,653,881	+		Shew_2272	0.16	-0.6
2,653,881	+		Shew_2272	0.16	+1.7
2,653,894	+		Shew_2272	0.18	+1.1
2,653,894	+		Shew_2272	0.18	+0.8
2,653,896	+		Shew_2272	0.18	-0.1
2,653,922	-		Shew_2272	0.23	+0.0
2,653,986	+		Shew_2272	0.35	+0.2
2,653,986	+		Shew_2272	0.35	+0.3
2,654,019	-		Shew_2272	0.41	+0.3
2,654,019	-		Shew_2272	0.41	+1.0
2,654,019	-		Shew_2272	0.41	-1.4
2,654,019	-		Shew_2272	0.41	+0.7
2,654,019	-		Shew_2272	0.41	+1.1
2,654,041	+		Shew_2272	0.45	-0.0
2,654,041	+		Shew_2272	0.45	+0.1
2,654,049	-		Shew_2272	0.46	+0.1
2,654,049	-		Shew_2272	0.46	+0.1
2,654,049	-		Shew_2272	0.46	-0.1
2,654,082	-		Shew_2272	0.52	+0.4
2,654,082	-		Shew_2272	0.52	+0.2
2,654,252	+		Shew_2272	0.84	-0.3
2,654,252	+		Shew_2272	0.84	+1.2
2,654,252	+		Shew_2272	0.84	+0.4
2,654,252	+		Shew_2272	0.84	+0.4
2,654,252	+		Shew_2272	0.84	+0.2
2,654,260	-		Shew_2272	0.85	+1.7
2,654,260	-		Shew_2272	0.85	+0.6
2,654,345	-				+0.6
2,654,380	-				+0.9
2,654,382	-				+1.3
2,654,390	-				+0.6
2,654,391	+				-0.2
2,654,392	-				+1.2
2,654,393	+				-0.5
2,654,456	-				+0.3
2,654,456	-				+0.8
2,654,464	+				-0.0
2,654,464	+				+0.6
2,654,467	-				-1.3
2,654,471	-				+0.1
2,654,472	-				+0.5
2,654,472	-				-2.2
2,654,505	+				-0.9
2,654,505	+				-0.1
2,654,505	+				+0.2
2,654,505	+				+0.5
2,654,505	+				-0.4
2,654,505	+				+0.0
2,654,505	+				-1.4
2,654,505	+				+0.3
2,654,505	+				+0.7
2,654,505	+				+0.2
2,654,505	+				+0.2
2,654,505	+				-1.8
2,654,505	+				-0.1
2,654,505	+				-1.8
2,654,505	+				+0.6
2,654,505	+				-0.4
2,654,505	+				-0.2
2,654,505	+				+0.6
2,654,505	+				-0.3
2,654,506	+				-0.9
2,654,581	+				+1.0
2,654,597	-				+1.0
2,654,614	-				+0.7
2,654,631	-				+0.4
2,654,631	+				-0.4
2,654,640	+				+0.7
2,654,667	+				+0.5
2,654,695	+				-1.7