Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2292

Experiment: constant light control first sampling

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	constant light control first sampling
2,361,255	-				-4.2
2,361,324	+				-3.5
2,361,332	-				-2.9
2,361,334	+				-4.1
2,361,334	+				-0.9
2,361,337	-				-1.6
2,361,358	-				-0.5
2,361,360	+				-0.5
2,361,360	+				-1.0
2,361,360	+				-0.2
2,361,360	+				+0.4
2,361,360	+				+0.4
2,361,368	-				-0.0
2,361,368	-				+0.1
2,361,368	-				-0.5
2,361,368	-				+0.0
2,361,368	-				+0.3
2,361,389	-				+0.5
2,361,389	-				-0.3
2,361,410	+				-0.4
2,361,445	+				-2.2
2,361,456	+				-1.8
2,361,462	-				-1.3
2,361,462	-				-1.6
2,361,464	-				-2.5
2,361,464	-				-2.5
2,361,479	+				-3.2
2,361,498	+				-0.1
2,361,498	+				-0.9
2,361,527	-				-2.3
2,361,532	-				-0.5
2,361,532	-				-0.3
2,361,588	-				-0.7
2,361,588	-				-2.1
2,361,618	+				-3.4
2,361,638	+		Synpcc7942_2292	0.10	-1.5
2,361,648	+		Synpcc7942_2292	0.11	-5.3
2,361,663	+		Synpcc7942_2292	0.12	-2.8
2,361,710	+		Synpcc7942_2292	0.14	-1.2
2,361,736	+		Synpcc7942_2292	0.15	-1.8
2,361,744	-		Synpcc7942_2292	0.15	-3.6
2,361,754	+		Synpcc7942_2292	0.16	-1.2
2,361,757	-		Synpcc7942_2292	0.16	-1.9
2,361,759	+		Synpcc7942_2292	0.16	-2.8
2,361,762	-		Synpcc7942_2292	0.16	-2.5
2,361,762	-		Synpcc7942_2292	0.16	-0.5
2,361,767	-		Synpcc7942_2292	0.16	-4.7
2,361,777	+		Synpcc7942_2292	0.17	-0.7
2,361,785	-		Synpcc7942_2292	0.17	-3.5
2,361,838	-		Synpcc7942_2292	0.19	-1.2
2,361,850	+		Synpcc7942_2292	0.20	-3.3
2,361,874	+		Synpcc7942_2292	0.21	-0.9
2,361,879	+		Synpcc7942_2292	0.21	-0.9
2,361,882	-		Synpcc7942_2292	0.21	-2.8
2,361,887	-		Synpcc7942_2292	0.21	-1.9
2,361,957	+		Synpcc7942_2292	0.25	-0.7
2,361,996	-		Synpcc7942_2292	0.26	-3.3
2,362,004	-		Synpcc7942_2292	0.27	-4.5
2,362,070	+		Synpcc7942_2292	0.30	-0.5
2,362,075	+		Synpcc7942_2292	0.30	-0.7
2,362,075	+		Synpcc7942_2292	0.30	-0.3
2,362,075	+		Synpcc7942_2292	0.30	-2.5
2,362,083	-		Synpcc7942_2292	0.30	-1.7
2,362,083	-		Synpcc7942_2292	0.30	-1.8
2,362,084	+		Synpcc7942_2292	0.30	-1.7
2,362,087	+		Synpcc7942_2292	0.30	-3.2
2,362,116	-		Synpcc7942_2292	0.32	-2.2
2,362,124	+		Synpcc7942_2292	0.32	-0.3
2,362,124	+		Synpcc7942_2292	0.32	-0.9
2,362,144	-		Synpcc7942_2292	0.33	+0.1
2,362,148	+		Synpcc7942_2292	0.33	-2.7
2,362,205	+		Synpcc7942_2292	0.35	+0.3
2,362,252	+		Synpcc7942_2292	0.38	-2.2
2,362,270	+		Synpcc7942_2292	0.38	-0.9
2,362,342	+		Synpcc7942_2292	0.42	-1.9
2,362,377	-		Synpcc7942_2292	0.43	+0.1
2,362,388	+		Synpcc7942_2292	0.44	-0.9
2,362,388	-		Synpcc7942_2292	0.44	-1.8
2,362,388	-		Synpcc7942_2292	0.44	-1.5
2,362,417	+		Synpcc7942_2292	0.45	+0.1
2,362,432	+		Synpcc7942_2292	0.46	-2.0
2,362,443	-		Synpcc7942_2292	0.46	-2.4
2,362,451	+		Synpcc7942_2292	0.46	-1.5
2,362,459	-		Synpcc7942_2292	0.47	-3.4
2,362,463	+		Synpcc7942_2292	0.47	-2.0
2,362,463	+		Synpcc7942_2292	0.47	-1.7
2,362,463	+		Synpcc7942_2292	0.47	-2.7
2,362,471	-		Synpcc7942_2292	0.47	+0.7
2,362,472	-		Synpcc7942_2292	0.47	-2.2
2,362,493	-		Synpcc7942_2292	0.48	-0.4
2,362,544	+		Synpcc7942_2292	0.50	-1.0
2,362,550	+		Synpcc7942_2292	0.51	-2.7
2,362,567	+		Synpcc7942_2292	0.51	-0.2
2,362,611	+		Synpcc7942_2292	0.53	-5.6
2,362,652	-		Synpcc7942_2292	0.55	-1.9
2,362,667	+		Synpcc7942_2292	0.56	+1.1
2,362,741	-		Synpcc7942_2292	0.59	-2.5
2,362,785	+		Synpcc7942_2292	0.61	-0.8
2,362,799	+		Synpcc7942_2292	0.62	-3.3
2,362,804	+		Synpcc7942_2292	0.62	-3.0
2,362,982	-		Synpcc7942_2292	0.70	-2.3
2,362,982	-		Synpcc7942_2292	0.70	-4.1
2,363,088	-		Synpcc7942_2292	0.74	-2.8
2,363,194	+		Synpcc7942_2292	0.79	-1.2
2,363,217	-		Synpcc7942_2292	0.80	-2.2
2,363,232	-		Synpcc7942_2292	0.81	-0.9
2,363,237	-		Synpcc7942_2292	0.81	-2.9
2,363,239	+		Synpcc7942_2292	0.81	-2.0
2,363,242	-		Synpcc7942_2292	0.81	-0.9
2,363,248	-		Synpcc7942_2292	0.82	+0.1
2,363,262	+		Synpcc7942_2292	0.82	+0.1
2,363,273	+		Synpcc7942_2292	0.83	-2.2
2,363,281	-		Synpcc7942_2292	0.83	-1.5
2,363,281	-		Synpcc7942_2292	0.83	-3.8
2,363,281	-		Synpcc7942_2292	0.83	-3.8
2,363,281	-		Synpcc7942_2292	0.83	+0.7
2,363,319	+		Synpcc7942_2292	0.85	-2.3
2,363,354	-		Synpcc7942_2292	0.86	-4.5
2,363,366	+		Synpcc7942_2292	0.87	-3.8
2,363,379	+		Synpcc7942_2292	0.87	-0.7
2,363,486	+				-2.9
2,363,516	-				-0.3
2,363,516	-				-0.7
2,363,524	+				-1.3
2,363,573	-				+0.1
2,363,576	+				-1.2
2,363,584	-				-0.2
2,363,584	-				-3.1
2,363,587	+				-0.6
2,363,629	-				-1.0
2,363,641	-				-1.7
2,363,643	+				+0.4
2,363,643	+				-0.4
2,363,666	+				+0.4
2,363,666	+				-0.9
2,363,666	+				+0.3
2,363,668	-				-0.8
2,363,669	-				-0.2
2,363,669	-				+0.6
2,363,674	-				-0.8
2,363,674	-				-0.6
2,363,674	-				-0.5
2,363,674	-				-1.3
2,363,674	-				+0.7
2,363,693	+				-0.0
2,363,708	+				-0.7
2,363,721	-		Synpcc7942_2293	0.11	-1.7
2,363,721	-		Synpcc7942_2293	0.11	-3.7
2,363,761	+		Synpcc7942_2293	0.20	-0.9
2,363,796	+		Synpcc7942_2293	0.28	-2.6
2,363,804	-		Synpcc7942_2293	0.30	-2.4
2,363,807	+		Synpcc7942_2293	0.30	-1.2
2,363,823	+		Synpcc7942_2293	0.34	-2.3
2,363,825	-		Synpcc7942_2293	0.34	-2.0
2,363,855	+		Synpcc7942_2293	0.41	-4.6
2,363,863	-		Synpcc7942_2293	0.43	-2.0
2,363,880	+		Synpcc7942_2293	0.47	-0.7
2,363,880	+		Synpcc7942_2293	0.47	-1.7
2,363,982	-		Synpcc7942_2293	0.69	-0.3
2,364,013	-		Synpcc7942_2293	0.76	-0.7
2,364,031	+		Synpcc7942_2293	0.80	-1.2
2,364,047	+		Synpcc7942_2293	0.84	+1.0
2,364,054	-		Synpcc7942_2293	0.85	+0.0
2,364,055	-		Synpcc7942_2293	0.86	-1.2
2,364,114	-				-0.1
2,364,122	-				+0.0
2,364,142	+				+0.0
2,364,144	-				-0.8
2,364,156	-				-0.2
2,364,265	+		Synpcc7942_2294	0.14	+0.1
2,364,265	+		Synpcc7942_2294	0.14	-0.2
2,364,271	-		Synpcc7942_2294	0.14	-0.5
2,364,273	-		Synpcc7942_2294	0.14	+0.3
2,364,273	-		Synpcc7942_2294	0.14	-0.2
2,364,273	-		Synpcc7942_2294	0.14	+0.2
2,364,273	-		Synpcc7942_2294	0.14	-0.5
2,364,292	+		Synpcc7942_2294	0.17	+0.4
2,364,292	+		Synpcc7942_2294	0.17	+0.3
2,364,293	-		Synpcc7942_2294	0.17	+0.5
2,364,300	-		Synpcc7942_2294	0.18	-0.0
2,364,302	+		Synpcc7942_2294	0.18	+0.4
2,364,346	-		Synpcc7942_2294	0.23	-0.6
2,364,348	-		Synpcc7942_2294	0.23	-0.3
2,364,358	+		Synpcc7942_2294	0.25	-0.3
2,364,365	-		Synpcc7942_2294	0.25	+0.0
2,364,366	-		Synpcc7942_2294	0.26	+1.0
2,364,366	-		Synpcc7942_2294	0.26	-1.0
2,364,388	+		Synpcc7942_2294	0.28	+0.2
2,364,388	+		Synpcc7942_2294	0.28	-0.0
2,364,389	-		Synpcc7942_2294	0.28	-0.3
2,364,396	+		Synpcc7942_2294	0.29	+0.6
2,364,396	-		Synpcc7942_2294	0.29	-0.3
2,364,406	-		Synpcc7942_2294	0.30	-0.1
2,364,420	-		Synpcc7942_2294	0.32	-1.8
2,364,421	-		Synpcc7942_2294	0.32	+0.3
2,364,426	+		Synpcc7942_2294	0.33	-0.3
2,364,433	+		Synpcc7942_2294	0.34	-0.4
2,364,441	-		Synpcc7942_2294	0.35	-0.2
2,364,447	+				+2.0
2,364,455	-		Synpcc7942_2294	0.36	-0.7
2,364,460	+		Synpcc7942_2294	0.37	+0.6
2,364,470	+		Synpcc7942_2294	0.38	+0.5
2,364,470	+		Synpcc7942_2294	0.38	-0.3
2,364,470	+		Synpcc7942_2294	0.38	+0.3
2,364,478	-		Synpcc7942_2294	0.39	+0.5
2,364,480	+		Synpcc7942_2294	0.39	-0.2
2,364,500	+		Synpcc7942_2294	0.42	-1.1
2,364,508	-		Synpcc7942_2294	0.43	-0.9
2,364,513	-		Synpcc7942_2294	0.43	-0.2
2,364,529	+		Synpcc7942_2294	0.45	-0.1
2,364,529	+		Synpcc7942_2294	0.45	-0.7
2,364,535	+		Synpcc7942_2294	0.46	-0.1
2,364,535	-		Synpcc7942_2294	0.46	+0.2
2,364,544	-		Synpcc7942_2294	0.47	+0.8
2,364,587	-		Synpcc7942_2294	0.52	-1.5
2,364,589	+		Synpcc7942_2294	0.52	+0.0
2,364,614	+		Synpcc7942_2294	0.55	-0.5
2,364,614	+		Synpcc7942_2294	0.55	-0.2
2,364,614	+		Synpcc7942_2294	0.55	+0.2
2,364,637	+		Synpcc7942_2294	0.58	+0.6
2,364,639	+		Synpcc7942_2294	0.58	-1.3
2,364,639	+		Synpcc7942_2294	0.58	-0.1
2,364,639	+		Synpcc7942_2294	0.58	-0.2
2,364,639	+		Synpcc7942_2294	0.58	+0.5
2,364,639	+		Synpcc7942_2294	0.58	+1.1
2,364,639	+		Synpcc7942_2294	0.58	+1.5
2,364,645	-		Synpcc7942_2294	0.59	-0.1
2,364,647	-		Synpcc7942_2294	0.59	-0.6
2,364,647	-		Synpcc7942_2294	0.59	+0.3
2,364,647	-		Synpcc7942_2294	0.59	+0.8