Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5486

Experiment: a-Ketoglutaric (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Ketoglutaric (C)
6,301,936	+				-0.8
6,301,936	+				+0.4
6,301,936	+				-0.4
6,301,936	+				+0.3
6,301,937	-				+0.1
6,301,937	-				-0.4
6,301,937	-				+0.4
6,301,940	+				-0.6
6,301,940	+				+1.4
6,301,940	+				+0.3
6,301,940	+				-0.7
6,301,940	+				-0.9
6,301,940	+				-0.9
6,301,940	+				+0.1
6,301,940	+				-2.0
6,301,940	+				-0.2
6,301,940	+				+1.1
6,301,940	+				-1.9
6,301,940	+				-0.5
6,301,940	+				-0.6
6,301,940	+				-0.1
6,301,940	+				-0.4
6,301,940	+				-0.7
6,301,940	+				-0.4
6,301,940	+				-0.7
6,301,940	+				+1.2
6,301,940	+				-0.8
6,301,940	+				-0.7
6,301,940	+				+0.8
6,301,940	+				-0.3
6,301,940	+				+0.2
6,301,940	+				+0.0
6,301,941	-				-0.2
6,301,941	-				+0.3
6,301,941	-				-0.8
6,301,941	-				+0.4
6,301,941	-				+1.0
6,301,941	-				-0.9
6,301,941	-				+1.4
6,301,941	-				+0.2
6,301,941	-				-1.3
6,301,941	-				-0.6
6,301,956	+				-0.8
6,301,956	+				-0.0
6,301,956	+				+1.2
6,301,956	+				-0.4
6,301,956	+				-0.0
6,301,956	+				-0.8
6,301,957	-				+0.5
6,301,957	-				-0.1
6,301,957	-				-0.4
6,301,957	-				-0.9
6,301,957	-				-0.3
6,302,046	+				+0.3
6,302,046	+				-0.7
6,302,046	+				-0.3
6,302,046	+				-1.5
6,302,046	+				-0.8
6,302,046	+				-1.6
6,302,046	+				+0.3
6,302,046	+				+0.3
6,302,046	+				+0.2
6,302,046	+				-0.2
6,302,047	-				+0.3
6,302,047	-				+0.8
6,302,050	+				+0.2
6,302,050	+				+0.8
6,302,050	+				-0.6
6,302,050	+				+2.2
6,302,051	-				+1.8
6,302,051	-				+1.2
6,302,051	-				-0.4
6,302,051	-				+0.9
6,302,051	-				-0.1
6,302,093	+				+0.4
6,302,094	-				+1.2
6,302,113	-				+0.0
6,302,152	-		Pf6N2E2_5485	0.12	+0.9
6,302,152	-		Pf6N2E2_5485	0.12	+0.2
6,302,425	-		Pf6N2E2_5485	0.68	-0.1
6,302,435	+		Pf6N2E2_5485	0.70	-1.3
6,302,436	-		Pf6N2E2_5485	0.70	+0.5
6,302,436	-		Pf6N2E2_5485	0.70	+0.5
6,302,436	-		Pf6N2E2_5485	0.70	+0.5
6,302,474	+		Pf6N2E2_5485	0.78	-0.5
6,302,474	+		Pf6N2E2_5485	0.78	-0.0
6,302,475	-		Pf6N2E2_5485	0.78	+0.8
6,302,737	+				-0.3
6,302,737	+				-1.1
6,302,737	+				+0.6
6,302,793	+				-2.5
6,302,793	+				-0.5
6,302,794	-				+0.1
6,302,928	+				-1.6
6,302,928	+				-3.6
6,302,928	+				-2.2
6,302,928	+				-2.8
6,302,928	+				-2.5
6,302,929	-				-3.6
6,302,929	-				-3.4
6,302,929	-				-3.3
6,302,929	-				-4.5
6,302,929	-				-3.0
6,302,929	-				-2.3
6,302,964	+				-3.7
6,302,965	-				-4.9
6,302,970	+				-2.8
6,302,970	+				-2.2
6,302,970	+				-3.5
6,302,971	-				-4.6
6,302,971	-				-3.8
6,302,971	-				-4.5
6,302,971	-				-0.8
6,302,971	-				-3.2
6,303,005	+				-3.6
6,303,005	+				-0.3
6,303,015	+		Pf6N2E2_5486	0.10	-0.5
6,303,015	+		Pf6N2E2_5486	0.10	-3.7
6,303,015	+		Pf6N2E2_5486	0.10	-1.2
6,303,015	+		Pf6N2E2_5486	0.10	-2.2
6,303,016	-		Pf6N2E2_5486	0.10	-3.6
6,303,016	-		Pf6N2E2_5486	0.10	-2.8
6,303,016	-		Pf6N2E2_5486	0.10	-3.1
6,303,016	-		Pf6N2E2_5486	0.10	-3.2
6,303,016	-		Pf6N2E2_5486	0.10	-4.0
6,303,016	-		Pf6N2E2_5486	0.10	-2.0
6,303,129	+		Pf6N2E2_5486	0.19	-2.2
6,303,393	+		Pf6N2E2_5486	0.39	-0.3
6,303,393	+		Pf6N2E2_5486	0.39	-3.2
6,303,393	+		Pf6N2E2_5486	0.39	-4.1
6,303,393	+		Pf6N2E2_5486	0.39	-3.0
6,303,393	+		Pf6N2E2_5486	0.39	-4.9
6,303,393	+		Pf6N2E2_5486	0.39	-3.9
6,303,393	+		Pf6N2E2_5486	0.39	-2.2
6,303,393	+		Pf6N2E2_5486	0.39	-3.8
6,303,393	+		Pf6N2E2_5486	0.39	-4.6
6,303,393	+		Pf6N2E2_5486	0.39	-3.3
6,303,393	+		Pf6N2E2_5486	0.39	-2.6
6,303,394	-		Pf6N2E2_5486	0.39	-0.6
6,303,394	-		Pf6N2E2_5486	0.39	-2.6
6,303,394	-		Pf6N2E2_5486	0.39	-3.6
6,303,394	-		Pf6N2E2_5486	0.39	-2.8
6,303,394	-		Pf6N2E2_5486	0.39	-3.0
6,303,394	-		Pf6N2E2_5486	0.39	-3.3
6,303,402	+		Pf6N2E2_5486	0.40	-3.4
6,303,402	+		Pf6N2E2_5486	0.40	-1.3
6,303,402	+		Pf6N2E2_5486	0.40	-1.6
6,303,402	+		Pf6N2E2_5486	0.40	-4.2
6,303,402	+		Pf6N2E2_5486	0.40	-2.9
6,303,403	-		Pf6N2E2_5486	0.40	-2.5
6,303,403	-		Pf6N2E2_5486	0.40	-3.4
6,303,403	-		Pf6N2E2_5486	0.40	-3.3
6,303,403	-		Pf6N2E2_5486	0.40	-3.5
6,303,403	-		Pf6N2E2_5486	0.40	+1.2
6,303,403	-		Pf6N2E2_5486	0.40	-4.0
6,303,403	-		Pf6N2E2_5486	0.40	-2.4
6,303,403	-		Pf6N2E2_5486	0.40	-1.6
6,303,408	+		Pf6N2E2_5486	0.40	-4.5
6,303,408	+		Pf6N2E2_5486	0.40	-4.4
6,303,409	-		Pf6N2E2_5486	0.40	-3.5
6,303,409	-		Pf6N2E2_5486	0.40	-2.9
6,303,409	-		Pf6N2E2_5486	0.40	-3.9
6,303,409	-		Pf6N2E2_5486	0.40	-4.5
6,303,549	+		Pf6N2E2_5486	0.51	-4.0
6,303,609	+		Pf6N2E2_5486	0.55	-3.7
6,303,609	+		Pf6N2E2_5486	0.55	-2.3
6,303,609	+		Pf6N2E2_5486	0.55	-2.3
6,303,609	+		Pf6N2E2_5486	0.55	-2.8
6,303,609	+		Pf6N2E2_5486	0.55	-2.4
6,303,610	-		Pf6N2E2_5486	0.55	-4.1
6,303,610	-		Pf6N2E2_5486	0.55	+0.2
6,303,610	-		Pf6N2E2_5486	0.55	-1.1
6,303,610	-		Pf6N2E2_5486	0.55	-2.6
6,303,610	-		Pf6N2E2_5486	0.55	-4.8
6,303,690	+		Pf6N2E2_5486	0.61	-3.2
6,303,691	-		Pf6N2E2_5486	0.62	-2.7
6,303,691	-		Pf6N2E2_5486	0.62	-3.4
6,303,691	-		Pf6N2E2_5486	0.62	-4.6
6,303,744	+		Pf6N2E2_5486	0.66	-0.5
6,303,744	+		Pf6N2E2_5486	0.66	-4.0
6,303,744	+		Pf6N2E2_5486	0.66	-2.7
6,303,745	-		Pf6N2E2_5486	0.66	-2.9
6,303,840	+		Pf6N2E2_5486	0.73	-4.2
6,303,840	+		Pf6N2E2_5486	0.73	-2.9
6,303,841	-		Pf6N2E2_5486	0.73	-2.4
6,303,885	+		Pf6N2E2_5486	0.76	-3.1
6,303,885	+		Pf6N2E2_5486	0.76	-3.8
6,303,885	+		Pf6N2E2_5486	0.76	-4.1
6,303,930	+		Pf6N2E2_5486	0.80	-5.0
6,303,931	-		Pf6N2E2_5486	0.80	-1.8
6,304,048	-		Pf6N2E2_5486	0.89	-3.2
6,304,071	+				-1.3
6,304,071	+				-3.4
6,304,071	+				-3.9
6,304,071	+				-3.5
6,304,072	-				-3.0
6,304,072	-				-3.7
6,304,072	-				-1.6
6,304,072	-				-1.2
6,304,080	+				-2.9
6,304,192	+				-3.2
6,304,216	-				-1.4
6,304,216	-				-0.8
6,304,258	+				-3.1
6,304,259	-				-2.9
6,304,260	+				-0.3
6,304,260	+				-3.4
6,304,261	-				-3.7
6,304,305	-				-2.4
6,304,365	+				-1.0
6,304,365	+				-1.3
6,304,365	+				-1.3
6,304,366	-				-2.1
6,304,366	-				-0.4
6,304,411	-				-2.1
6,304,411	-				-1.3
6,304,411	-				-1.6
6,304,764	-		Pf6N2E2_5487	0.27	-4.5
6,304,967	+		Pf6N2E2_5487	0.42	-4.4
6,304,967	+		Pf6N2E2_5487	0.42	-2.7
6,304,967	+		Pf6N2E2_5487	0.42	-3.0
6,305,034	+		Pf6N2E2_5487	0.47	-4.0