Experiment: L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_4118 and Ac3H11_4119 are separated by 14 nucleotides Ac3H11_4119 and Ac3H11_4120 are separated by 597 nucleotides
Ac3H11_4118 - Far-related protein, at 371,003 to 371,893
_4118
Ac3H11_4119 - Integral membrane protein, at 371,908 to 372,600
_4119
Ac3H11_4120 - diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s), at 373,198 to 375,720
_4120
Position (kb) 371
372
373 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 370.913 kb on + strand at 370.913 kb on + strand at 370.913 kb on + strand at 370.913 kb on + strand at 370.913 kb on + strand at 370.914 kb on - strand at 370.914 kb on - strand at 370.914 kb on - strand at 370.914 kb on - strand at 370.914 kb on - strand at 370.914 kb on - strand at 370.915 kb on + strand at 370.915 kb on + strand at 370.916 kb on - strand at 371.171 kb on + strand, within Ac3H11_4118 at 371.171 kb on + strand, within Ac3H11_4118 at 371.171 kb on + strand, within Ac3H11_4118 at 371.171 kb on + strand, within Ac3H11_4118 at 371.171 kb on + strand, within Ac3H11_4118 at 371.172 kb on - strand, within Ac3H11_4118 at 371.172 kb on - strand, within Ac3H11_4118 at 371.172 kb on - strand, within Ac3H11_4118 at 371.186 kb on + strand, within Ac3H11_4118 at 371.186 kb on + strand, within Ac3H11_4118 at 371.236 kb on - strand, within Ac3H11_4118 at 371.354 kb on + strand, within Ac3H11_4118 at 371.429 kb on + strand, within Ac3H11_4118 at 371.429 kb on + strand, within Ac3H11_4118 at 371.429 kb on + strand, within Ac3H11_4118 at 371.429 kb on + strand, within Ac3H11_4118 at 371.430 kb on - strand, within Ac3H11_4118 at 371.481 kb on - strand, within Ac3H11_4118 at 371.481 kb on - strand, within Ac3H11_4118 at 371.481 kb on - strand, within Ac3H11_4118 at 371.481 kb on - strand, within Ac3H11_4118 at 371.666 kb on + strand, within Ac3H11_4118 at 371.675 kb on + strand, within Ac3H11_4118 at 372.011 kb on - strand, within Ac3H11_4119 at 372.011 kb on - strand, within Ac3H11_4119 at 372.052 kb on + strand, within Ac3H11_4119 at 372.053 kb on - strand, within Ac3H11_4119 at 372.053 kb on - strand, within Ac3H11_4119 at 372.053 kb on - strand, within Ac3H11_4119 at 372.382 kb on + strand, within Ac3H11_4119 at 372.382 kb on + strand, within Ac3H11_4119 at 372.382 kb on + strand, within Ac3H11_4119 at 372.382 kb on + strand, within Ac3H11_4119 at 372.382 kb on + strand, within Ac3H11_4119 at 372.382 kb on + strand, within Ac3H11_4119 at 372.382 kb on + strand, within Ac3H11_4119 at 372.382 kb on + strand, within Ac3H11_4119 at 372.382 kb on + strand, within Ac3H11_4119 at 372.382 kb on + strand, within Ac3H11_4119 at 372.382 kb on + strand, within Ac3H11_4119 at 372.383 kb on - strand, within Ac3H11_4119 at 372.383 kb on - strand, within Ac3H11_4119 at 372.383 kb on - strand, within Ac3H11_4119 at 372.383 kb on - strand, within Ac3H11_4119 at 372.383 kb on - strand, within Ac3H11_4119 at 372.383 kb on - strand, within Ac3H11_4119 at 372.383 kb on - strand, within Ac3H11_4119 at 372.383 kb on - strand, within Ac3H11_4119 at 372.535 kb on + strand at 372.535 kb on + strand at 372.535 kb on + strand at 372.535 kb on + strand at 372.535 kb on + strand at 372.536 kb on - strand at 372.536 kb on - strand at 372.536 kb on - strand at 372.536 kb on - strand at 372.536 kb on - strand at 372.536 kb on - strand at 372.673 kb on + strand at 372.694 kb on + strand at 372.694 kb on + strand at 372.694 kb on + strand at 372.694 kb on + strand at 372.694 kb on + strand at 372.695 kb on - strand at 372.695 kb on - strand at 372.695 kb on - strand at 372.696 kb on + strand at 372.696 kb on + strand at 372.696 kb on + strand at 372.696 kb on + strand at 372.696 kb on + strand at 372.697 kb on - strand at 372.697 kb on - strand at 372.697 kb on - strand at 372.697 kb on - strand at 372.860 kb on + strand at 372.860 kb on + strand at 372.860 kb on + strand at 372.860 kb on + strand at 372.860 kb on + strand at 372.860 kb on + strand at 372.860 kb on + strand at 372.861 kb on - strand at 372.861 kb on - strand at 372.861 kb on - strand at 372.861 kb on - strand at 372.861 kb on - strand at 372.862 kb on + strand at 372.862 kb on + strand at 372.862 kb on + strand at 372.862 kb on + strand at 372.862 kb on + strand at 372.862 kb on + strand at 372.862 kb on + strand at 372.862 kb on + strand at 372.862 kb on + strand at 372.862 kb on + strand at 372.862 kb on + strand at 372.862 kb on + strand at 372.862 kb on + strand at 372.862 kb on + strand at 372.862 kb on + strand at 372.862 kb on + strand at 372.862 kb on + strand at 372.862 kb on + strand at 372.862 kb on + strand at 372.863 kb on - strand at 372.863 kb on - strand at 372.863 kb on - strand at 372.863 kb on - strand at 372.863 kb on - strand at 372.863 kb on - strand at 372.863 kb on - strand at 372.863 kb on - strand at 372.863 kb on - strand at 372.864 kb on + strand at 372.864 kb on + strand at 372.865 kb on - strand at 372.865 kb on - strand at 372.865 kb on - strand at 372.865 kb on - strand at 372.865 kb on - strand at 372.974 kb on - strand at 372.974 kb on - strand at 372.989 kb on - strand at 373.052 kb on + strand at 373.052 kb on + strand at 373.052 kb on + strand at 373.052 kb on + strand at 373.052 kb on + strand at 373.052 kb on + strand at 373.052 kb on + strand at 373.052 kb on + strand at 373.052 kb on + strand at 373.104 kb on + strand at 373.104 kb on + strand at 373.104 kb on + strand at 373.124 kb on + strand at 373.124 kb on + strand at 373.124 kb on + strand at 373.393 kb on + strand at 373.393 kb on + strand at 373.393 kb on + strand at 373.393 kb on + strand at 373.393 kb on + strand at 373.393 kb on + strand at 373.393 kb on + strand at 373.393 kb on + strand at 373.393 kb on + strand at 373.393 kb on + strand at 373.393 kb on + strand at 373.393 kb on + strand at 373.394 kb on - strand at 373.394 kb on - strand at 373.394 kb on - strand at 373.394 kb on - strand at 373.394 kb on - strand at 373.394 kb on - strand at 373.394 kb on - strand at 373.394 kb on - strand at 373.394 kb on - strand at 373.394 kb on - strand at 373.394 kb on - strand at 373.394 kb on - strand at 373.408 kb on + strand at 373.409 kb on - strand at 373.595 kb on - strand, within Ac3H11_4120 at 373.595 kb on - strand, within Ac3H11_4120 at 373.595 kb on - strand, within Ac3H11_4120
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lactate (C) remove 370,913 + +0.1 370,913 + -0.3 370,913 + +0.7 370,913 + +0.5 370,913 + +0.0 370,914 - +0.2 370,914 - +1.1 370,914 - -0.5 370,914 - -0.0 370,914 - +0.7 370,914 - +0.7 370,915 + -0.6 370,915 + +0.9 370,916 - +0.7 371,171 + Ac3H11_4118 0.19 -0.7 371,171 + Ac3H11_4118 0.19 +0.2 371,171 + Ac3H11_4118 0.19 +0.1 371,171 + Ac3H11_4118 0.19 +0.1 371,171 + Ac3H11_4118 0.19 +0.0 371,172 - Ac3H11_4118 0.19 +1.3 371,172 - Ac3H11_4118 0.19 -0.5 371,172 - Ac3H11_4118 0.19 +0.3 371,186 + Ac3H11_4118 0.21 +0.5 371,186 + Ac3H11_4118 0.21 +0.1 371,236 - Ac3H11_4118 0.26 +1.1 371,354 + Ac3H11_4118 0.39 +0.1 371,429 + Ac3H11_4118 0.48 -0.5 371,429 + Ac3H11_4118 0.48 +0.1 371,429 + Ac3H11_4118 0.48 +0.6 371,429 + Ac3H11_4118 0.48 +0.3 371,430 - Ac3H11_4118 0.48 +1.2 371,481 - Ac3H11_4118 0.54 -0.0 371,481 - Ac3H11_4118 0.54 +1.0 371,481 - Ac3H11_4118 0.54 +0.2 371,481 - Ac3H11_4118 0.54 -0.5 371,666 + Ac3H11_4118 0.74 +0.4 371,675 + Ac3H11_4118 0.75 +1.1 372,011 - Ac3H11_4119 0.15 +0.6 372,011 - Ac3H11_4119 0.15 -0.1 372,052 + Ac3H11_4119 0.21 -0.7 372,053 - Ac3H11_4119 0.21 -0.1 372,053 - Ac3H11_4119 0.21 +0.4 372,053 - Ac3H11_4119 0.21 -1.0 372,382 + Ac3H11_4119 0.68 -0.7 372,382 + Ac3H11_4119 0.68 -0.0 372,382 + Ac3H11_4119 0.68 -0.1 372,382 + Ac3H11_4119 0.68 +0.1 372,382 + Ac3H11_4119 0.68 +0.8 372,382 + Ac3H11_4119 0.68 -0.3 372,382 + Ac3H11_4119 0.68 +1.2 372,382 + Ac3H11_4119 0.68 +0.6 372,382 + Ac3H11_4119 0.68 -0.2 372,382 + Ac3H11_4119 0.68 +0.1 372,382 + Ac3H11_4119 0.68 -0.1 372,383 - Ac3H11_4119 0.69 +0.3 372,383 - Ac3H11_4119 0.69 +0.3 372,383 - Ac3H11_4119 0.69 +3.1 372,383 - Ac3H11_4119 0.69 +1.3 372,383 - Ac3H11_4119 0.69 +0.5 372,383 - Ac3H11_4119 0.69 +0.4 372,383 - Ac3H11_4119 0.69 -0.2 372,383 - Ac3H11_4119 0.69 +0.7 372,535 + +0.6 372,535 + +0.2 372,535 + +0.4 372,535 + -1.4 372,535 + +0.5 372,536 - -0.1 372,536 - -0.7 372,536 - -0.8 372,536 - -0.4 372,536 - -0.5 372,536 - +0.2 372,673 + +0.4 372,694 + +0.2 372,694 + +0.7 372,694 + -0.3 372,694 + +0.6 372,694 + +1.1 372,695 - +0.7 372,695 - -0.9 372,695 - -0.3 372,696 + +0.7 372,696 + -0.4 372,696 + +1.1 372,696 + +0.9 372,696 + +0.8 372,697 - +0.5 372,697 - -0.2 372,697 - +0.8 372,697 - -0.3 372,860 + -1.4 372,860 + -0.8 372,860 + +0.7 372,860 + -0.1 372,860 + +0.6 372,860 + -0.1 372,860 + +0.3 372,861 - +1.2 372,861 - +0.6 372,861 - +1.0 372,861 - +0.6 372,861 - +0.1 372,862 + +0.3 372,862 + -1.6 372,862 + +1.2 372,862 + -0.1 372,862 + +0.5 372,862 + -0.7 372,862 + +0.1 372,862 + -0.2 372,862 + -1.2 372,862 + +0.0 372,862 + -0.2 372,862 + +0.5 372,862 + -0.1 372,862 + +0.2 372,862 + +0.5 372,862 + +0.3 372,862 + +1.5 372,862 + +0.9 372,862 + +0.4 372,863 - +0.1 372,863 - -0.1 372,863 - +0.6 372,863 - +0.1 372,863 - -0.8 372,863 - +1.2 372,863 - +0.3 372,863 - -0.2 372,863 - +0.4 372,864 + -0.3 372,864 + +0.9 372,865 - +0.5 372,865 - -0.1 372,865 - +0.4 372,865 - +1.0 372,865 - +0.4 372,974 - +0.2 372,974 - +1.0 372,989 - -1.2 373,052 + +0.5 373,052 + +1.3 373,052 + +0.7 373,052 + -0.1 373,052 + +0.4 373,052 + +0.9 373,052 + +0.7 373,052 + +0.6 373,052 + +0.7 373,104 + +1.0 373,104 + +0.2 373,104 + +1.3 373,124 + -1.8 373,124 + -0.3 373,124 + -1.4 373,393 + +0.5 373,393 + +1.8 373,393 + +0.7 373,393 + +0.6 373,393 + -0.5 373,393 + +0.4 373,393 + +0.3 373,393 + -0.2 373,393 + +1.0 373,393 + +1.1 373,393 + -0.6 373,393 + +1.5 373,394 - +2.6 373,394 - -0.3 373,394 - -0.2 373,394 - +0.9 373,394 - +0.6 373,394 - -0.2 373,394 - +0.7 373,394 - +0.3 373,394 - +0.9 373,394 - -0.4 373,394 - +0.3 373,394 - +1.5 373,408 + -0.2 373,409 - +0.3 373,595 - Ac3H11_4120 0.16 +0.6 373,595 - Ac3H11_4120 0.16 +0.9 373,595 - Ac3H11_4120 0.16 +0.3
Or see this region's nucleotide sequence