Experiment: L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_1651 and Ac3H11_1652 are separated by 206 nucleotides Ac3H11_1652 and Ac3H11_1653 overlap by 47 nucleotides Ac3H11_1653 and Ac3H11_1654 are separated by 136 nucleotides
Ac3H11_1651 - Homoserine kinase (EC 2.7.1.39), at 243,178 to 244,128
_1651
Ac3H11_1652 - FIGfam005179, at 244,335 to 245,183
_1652
Ac3H11_1653 - hypothetical protein, at 245,137 to 246,021
_1653
Ac3H11_1654 - Predicted phosphatase, at 246,158 to 248,377
_1654
Position (kb) 244
245
246 Strain fitness (log2 ratio) -2
-1
0
1 at 244.644 kb on + strand, within Ac3H11_1652 at 244.644 kb on + strand, within Ac3H11_1652 at 244.713 kb on + strand, within Ac3H11_1652 at 244.713 kb on + strand, within Ac3H11_1652 at 244.713 kb on + strand, within Ac3H11_1652 at 244.794 kb on + strand, within Ac3H11_1652 at 244.794 kb on + strand, within Ac3H11_1652 at 244.794 kb on + strand, within Ac3H11_1652 at 244.794 kb on + strand, within Ac3H11_1652 at 244.794 kb on + strand, within Ac3H11_1652 at 244.795 kb on - strand, within Ac3H11_1652 at 245.582 kb on - strand, within Ac3H11_1653 at 245.582 kb on - strand, within Ac3H11_1653 at 245.617 kb on + strand, within Ac3H11_1653 at 245.632 kb on + strand, within Ac3H11_1653 at 245.632 kb on + strand, within Ac3H11_1653 at 245.633 kb on - strand, within Ac3H11_1653 at 245.686 kb on + strand, within Ac3H11_1653 at 245.686 kb on + strand, within Ac3H11_1653 at 245.686 kb on + strand, within Ac3H11_1653 at 245.687 kb on - strand, within Ac3H11_1653 at 245.687 kb on - strand, within Ac3H11_1653 at 245.864 kb on - strand, within Ac3H11_1653 at 245.864 kb on - strand, within Ac3H11_1653 at 246.016 kb on + strand at 246.017 kb on - strand at 246.080 kb on + strand at 246.080 kb on + strand at 246.080 kb on + strand at 246.080 kb on + strand at 246.081 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lactate (C) remove 244,644 + Ac3H11_1652 0.36 -2.0 244,644 + Ac3H11_1652 0.36 +1.6 244,713 + Ac3H11_1652 0.45 -0.5 244,713 + Ac3H11_1652 0.45 +0.0 244,713 + Ac3H11_1652 0.45 -0.5 244,794 + Ac3H11_1652 0.54 +0.0 244,794 + Ac3H11_1652 0.54 -0.3 244,794 + Ac3H11_1652 0.54 +1.3 244,794 + Ac3H11_1652 0.54 -0.2 244,794 + Ac3H11_1652 0.54 -0.3 244,795 - Ac3H11_1652 0.54 +0.3 245,582 - Ac3H11_1653 0.50 -0.7 245,582 - Ac3H11_1653 0.50 -0.0 245,617 + Ac3H11_1653 0.54 +0.5 245,632 + Ac3H11_1653 0.56 -2.6 245,632 + Ac3H11_1653 0.56 +0.5 245,633 - Ac3H11_1653 0.56 -0.5 245,686 + Ac3H11_1653 0.62 -1.2 245,686 + Ac3H11_1653 0.62 +0.0 245,686 + Ac3H11_1653 0.62 +0.3 245,687 - Ac3H11_1653 0.62 -1.3 245,687 - Ac3H11_1653 0.62 +0.1 245,864 - Ac3H11_1653 0.82 -1.0 245,864 - Ac3H11_1653 0.82 -0.1 246,016 + -0.6 246,017 - +0.6 246,080 + -0.3 246,080 + -1.3 246,080 + -0.0 246,080 + -1.0 246,081 - -0.5
Or see this region's nucleotide sequence