Experiment: D-Fructose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS16610 and ABZR86_RS16615 are separated by 153 nucleotides ABZR86_RS16615 and ABZR86_RS16620 are separated by 34 nucleotides ABZR86_RS16620 and ABZR86_RS16625 are separated by 12 nucleotides ABZR86_RS16625 and ABZR86_RS16630 are separated by 55 nucleotides
ABZR86_RS16610: ABZR86_RS16610 - hypothetical protein, at 3,752,879 to 3,753,394
_RS16610
ABZR86_RS16615: ABZR86_RS16615 - ankyrin repeat domain-containing protein, at 3,753,548 to 3,754,192
_RS16615
ABZR86_RS16620: ABZR86_RS16620 - hypothetical protein, at 3,754,227 to 3,754,691
_RS16620
ABZR86_RS16625: ABZR86_RS16625 - hypothetical protein, at 3,754,704 to 3,755,165
_RS16625
ABZR86_RS16630: ABZR86_RS16630 - energy transducer TonB, at 3,755,221 to 3,755,628
_RS16630
Position (kb)
3754
3755 Strain fitness (log2 ratio)
-1
0
1
2 at 3753.293 kb on - strand, within ABZR86_RS16610 at 3753.304 kb on - strand, within ABZR86_RS16610 at 3753.378 kb on + strand at 3753.378 kb on + strand at 3753.379 kb on - strand at 3753.427 kb on - strand at 3753.438 kb on - strand at 3753.530 kb on + strand at 3753.707 kb on + strand, within ABZR86_RS16615 at 3753.767 kb on + strand, within ABZR86_RS16615 at 3753.807 kb on + strand, within ABZR86_RS16615 at 3753.901 kb on - strand, within ABZR86_RS16615 at 3753.901 kb on - strand, within ABZR86_RS16615 at 3754.029 kb on - strand, within ABZR86_RS16615 at 3754.097 kb on + strand, within ABZR86_RS16615 at 3754.186 kb on + strand at 3754.186 kb on + strand at 3754.220 kb on + strand at 3754.220 kb on + strand at 3754.221 kb on - strand at 3754.450 kb on - strand, within ABZR86_RS16620 at 3754.677 kb on + strand at 3754.677 kb on + strand at 3754.677 kb on + strand at 3754.677 kb on + strand at 3754.677 kb on + strand at 3754.677 kb on + strand at 3754.678 kb on - strand at 3754.678 kb on - strand at 3754.678 kb on - strand at 3754.689 kb on + strand at 3754.690 kb on - strand at 3754.818 kb on + strand, within ABZR86_RS16625 at 3754.838 kb on + strand, within ABZR86_RS16625 at 3754.850 kb on + strand, within ABZR86_RS16625 at 3754.851 kb on - strand, within ABZR86_RS16625 at 3754.852 kb on + strand, within ABZR86_RS16625 at 3754.852 kb on + strand, within ABZR86_RS16625 at 3754.871 kb on + strand, within ABZR86_RS16625 at 3754.872 kb on - strand, within ABZR86_RS16625 at 3754.959 kb on - strand, within ABZR86_RS16625 at 3754.959 kb on - strand, within ABZR86_RS16625 at 3754.981 kb on - strand, within ABZR86_RS16625 at 3755.046 kb on + strand, within ABZR86_RS16625 at 3755.046 kb on + strand, within ABZR86_RS16625 at 3755.047 kb on - strand, within ABZR86_RS16625 at 3755.047 kb on - strand, within ABZR86_RS16625 at 3755.086 kb on - strand, within ABZR86_RS16625 at 3755.086 kb on - strand, within ABZR86_RS16625 at 3755.119 kb on - strand at 3755.164 kb on - strand at 3755.168 kb on + strand at 3755.168 kb on + strand at 3755.169 kb on - strand at 3755.172 kb on + strand at 3755.199 kb on - strand at 3755.216 kb on + strand at 3755.319 kb on - strand, within ABZR86_RS16630 at 3755.327 kb on + strand, within ABZR86_RS16630 at 3755.328 kb on - strand, within ABZR86_RS16630 at 3755.494 kb on + strand, within ABZR86_RS16630 at 3755.578 kb on + strand, within ABZR86_RS16630 at 3755.643 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Fructose (C) remove 3,753,293 - ABZR86_RS16610 0.80 +2.5 3,753,304 - ABZR86_RS16610 0.82 +0.2 3,753,378 + +0.4 3,753,378 + -0.0 3,753,379 - -0.1 3,753,427 - +1.0 3,753,438 - +2.1 3,753,530 + +0.3 3,753,707 + ABZR86_RS16615 0.25 +0.1 3,753,767 + ABZR86_RS16615 0.34 +0.4 3,753,807 + ABZR86_RS16615 0.40 -1.7 3,753,901 - ABZR86_RS16615 0.55 -0.6 3,753,901 - ABZR86_RS16615 0.55 +0.6 3,754,029 - ABZR86_RS16615 0.75 +0.0 3,754,097 + ABZR86_RS16615 0.85 -0.4 3,754,186 + +0.7 3,754,186 + -0.8 3,754,220 + +0.0 3,754,220 + -0.5 3,754,221 - -0.0 3,754,450 - ABZR86_RS16620 0.48 +0.6 3,754,677 + +0.5 3,754,677 + +0.2 3,754,677 + -1.3 3,754,677 + +0.0 3,754,677 + -0.0 3,754,677 + -0.2 3,754,678 - +0.3 3,754,678 - -0.4 3,754,678 - -0.1 3,754,689 + +0.3 3,754,690 - -0.4 3,754,818 + ABZR86_RS16625 0.25 +0.8 3,754,838 + ABZR86_RS16625 0.29 -0.4 3,754,850 + ABZR86_RS16625 0.32 +0.2 3,754,851 - ABZR86_RS16625 0.32 +0.4 3,754,852 + ABZR86_RS16625 0.32 -0.0 3,754,852 + ABZR86_RS16625 0.32 -0.9 3,754,871 + ABZR86_RS16625 0.36 -0.3 3,754,872 - ABZR86_RS16625 0.36 +1.0 3,754,959 - ABZR86_RS16625 0.55 +0.2 3,754,959 - ABZR86_RS16625 0.55 -0.2 3,754,981 - ABZR86_RS16625 0.60 +0.1 3,755,046 + ABZR86_RS16625 0.74 +1.2 3,755,046 + ABZR86_RS16625 0.74 +0.1 3,755,047 - ABZR86_RS16625 0.74 +0.3 3,755,047 - ABZR86_RS16625 0.74 +0.0 3,755,086 - ABZR86_RS16625 0.83 +0.1 3,755,086 - ABZR86_RS16625 0.83 -1.6 3,755,119 - -0.1 3,755,164 - -0.4 3,755,168 + -0.3 3,755,168 + +0.0 3,755,169 - +0.6 3,755,172 + -0.8 3,755,199 - -0.2 3,755,216 + -0.2 3,755,319 - ABZR86_RS16630 0.24 +0.4 3,755,327 + ABZR86_RS16630 0.26 -0.3 3,755,328 - ABZR86_RS16630 0.26 -0.6 3,755,494 + ABZR86_RS16630 0.67 +0.4 3,755,578 + ABZR86_RS16630 0.88 +0.3 3,755,643 + +0.2
Or see this region's nucleotide sequence