Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS10765

Experiment: D-Fructose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR86_RS10755 and ABZR86_RS10760 are separated by 289 nucleotidesABZR86_RS10760 and ABZR86_RS10765 are separated by 15 nucleotidesABZR86_RS10765 and ABZR86_RS10770 are separated by 244 nucleotidesABZR86_RS10770 and ABZR86_RS10775 are separated by 70 nucleotides ABZR86_RS10755: ABZR86_RS10755 - oligopeptide transporter, OPT family, at 2,391,569 to 2,393,554 _RS10755 ABZR86_RS10760: ABZR86_RS10760 - nuclear transport factor 2 family protein, at 2,393,844 to 2,394,305 _RS10760 ABZR86_RS10765: ABZR86_RS10765 - hypothetical protein, at 2,394,321 to 2,394,785 _RS10765 ABZR86_RS10770: ABZR86_RS10770 - transcriptional regulator, at 2,395,030 to 2,395,353 _RS10770 ABZR86_RS10775: ABZR86_RS10775 - RcnB family protein, at 2,395,424 to 2,395,786 _RS10775 Position (kb) 2394 2395Strain fitness (log2 ratio) -1 0 1 2 3at 2393.504 kb on + strandat 2393.505 kb on - strandat 2393.505 kb on - strandat 2393.595 kb on + strandat 2393.595 kb on + strandat 2393.595 kb on + strandat 2393.659 kb on - strandat 2393.812 kb on + strandat 2393.813 kb on - strandat 2394.051 kb on + strand, within ABZR86_RS10760at 2394.052 kb on - strand, within ABZR86_RS10760at 2394.052 kb on - strand, within ABZR86_RS10760at 2394.102 kb on + strand, within ABZR86_RS10760at 2394.102 kb on + strand, within ABZR86_RS10760at 2394.103 kb on - strand, within ABZR86_RS10760at 2394.103 kb on - strand, within ABZR86_RS10760at 2394.103 kb on - strand, within ABZR86_RS10760at 2394.285 kb on + strandat 2394.285 kb on + strandat 2394.285 kb on + strandat 2394.286 kb on - strandat 2394.286 kb on - strandat 2394.406 kb on + strand, within ABZR86_RS10765at 2394.406 kb on + strand, within ABZR86_RS10765at 2394.406 kb on + strand, within ABZR86_RS10765at 2394.406 kb on + strand, within ABZR86_RS10765at 2394.406 kb on + strand, within ABZR86_RS10765at 2394.656 kb on + strand, within ABZR86_RS10765at 2394.656 kb on + strand, within ABZR86_RS10765at 2394.656 kb on + strand, within ABZR86_RS10765at 2394.656 kb on + strand, within ABZR86_RS10765at 2394.656 kb on + strand, within ABZR86_RS10765at 2394.656 kb on + strand, within ABZR86_RS10765at 2394.656 kb on + strand, within ABZR86_RS10765at 2394.657 kb on - strand, within ABZR86_RS10765at 2394.657 kb on - strand, within ABZR86_RS10765at 2394.657 kb on - strand, within ABZR86_RS10765at 2394.703 kb on + strand, within ABZR86_RS10765at 2394.703 kb on + strand, within ABZR86_RS10765at 2394.704 kb on - strand, within ABZR86_RS10765at 2394.925 kb on + strandat 2394.925 kb on + strandat 2394.925 kb on + strandat 2394.925 kb on + strandat 2394.926 kb on - strandat 2394.983 kb on + strandat 2394.984 kb on - strandat 2395.004 kb on + strandat 2395.004 kb on + strandat 2395.004 kb on + strandat 2395.004 kb on + strandat 2395.004 kb on + strandat 2395.004 kb on + strandat 2395.004 kb on + strandat 2395.005 kb on - strandat 2395.005 kb on - strandat 2395.241 kb on - strand, within ABZR86_RS10770at 2395.271 kb on + strand, within ABZR86_RS10770at 2395.506 kb on + strand, within ABZR86_RS10775at 2395.506 kb on + strand, within ABZR86_RS10775at 2395.506 kb on + strand, within ABZR86_RS10775at 2395.539 kb on + strand, within ABZR86_RS10775at 2395.539 kb on + strand, within ABZR86_RS10775at 2395.549 kb on - strand, within ABZR86_RS10775at 2395.549 kb on - strand, within ABZR86_RS10775at 2395.560 kb on + strand, within ABZR86_RS10775at 2395.560 kb on + strand, within ABZR86_RS10775at 2395.560 kb on + strand, within ABZR86_RS10775at 2395.561 kb on - strand, within ABZR86_RS10775at 2395.561 kb on - strand, within ABZR86_RS10775at 2395.561 kb on - strand, within ABZR86_RS10775at 2395.561 kb on - strand, within ABZR86_RS10775at 2395.561 kb on - strand, within ABZR86_RS10775at 2395.563 kb on + strand, within ABZR86_RS10775at 2395.563 kb on + strand, within ABZR86_RS10775at 2395.563 kb on + strand, within ABZR86_RS10775at 2395.563 kb on + strand, within ABZR86_RS10775at 2395.563 kb on + strand, within ABZR86_RS10775at 2395.563 kb on + strand, within ABZR86_RS10775at 2395.563 kb on + strand, within ABZR86_RS10775at 2395.564 kb on - strand, within ABZR86_RS10775at 2395.564 kb on - strand, within ABZR86_RS10775at 2395.564 kb on - strand, within ABZR86_RS10775at 2395.575 kb on + strand, within ABZR86_RS10775at 2395.575 kb on + strand, within ABZR86_RS10775at 2395.575 kb on + strand, within ABZR86_RS10775at 2395.576 kb on - strand, within ABZR86_RS10775at 2395.578 kb on + strand, within ABZR86_RS10775at 2395.578 kb on + strand, within ABZR86_RS10775at 2395.579 kb on - strand, within ABZR86_RS10775at 2395.579 kb on - strand, within ABZR86_RS10775at 2395.608 kb on + strand, within ABZR86_RS10775at 2395.609 kb on - strand, within ABZR86_RS10775at 2395.775 kb on + strandat 2395.776 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Fructose (C)
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2,393,504 + +0.6
2,393,505 - +0.9
2,393,505 - -0.1
2,393,595 + +0.6
2,393,595 + -0.2
2,393,595 + +0.1
2,393,659 - +0.4
2,393,812 + +0.0
2,393,813 - -0.1
2,394,051 + ABZR86_RS10760 0.45 +0.1
2,394,052 - ABZR86_RS10760 0.45 +0.3
2,394,052 - ABZR86_RS10760 0.45 -0.2
2,394,102 + ABZR86_RS10760 0.56 -0.4
2,394,102 + ABZR86_RS10760 0.56 +0.5
2,394,103 - ABZR86_RS10760 0.56 -0.0
2,394,103 - ABZR86_RS10760 0.56 +0.5
2,394,103 - ABZR86_RS10760 0.56 -0.2
2,394,285 + +2.4
2,394,285 + +0.1
2,394,285 + +0.6
2,394,286 - +0.9
2,394,286 - +0.4
2,394,406 + ABZR86_RS10765 0.18 +0.5
2,394,406 + ABZR86_RS10765 0.18 -0.7
2,394,406 + ABZR86_RS10765 0.18 +0.6
2,394,406 + ABZR86_RS10765 0.18 +0.8
2,394,406 + ABZR86_RS10765 0.18 +1.7
2,394,656 + ABZR86_RS10765 0.72 +0.2
2,394,656 + ABZR86_RS10765 0.72 +0.3
2,394,656 + ABZR86_RS10765 0.72 +0.2
2,394,656 + ABZR86_RS10765 0.72 -0.2
2,394,656 + ABZR86_RS10765 0.72 -0.3
2,394,656 + ABZR86_RS10765 0.72 -0.3
2,394,656 + ABZR86_RS10765 0.72 -0.2
2,394,657 - ABZR86_RS10765 0.72 +0.8
2,394,657 - ABZR86_RS10765 0.72 -0.2
2,394,657 - ABZR86_RS10765 0.72 +0.6
2,394,703 + ABZR86_RS10765 0.82 -0.4
2,394,703 + ABZR86_RS10765 0.82 +0.4
2,394,704 - ABZR86_RS10765 0.82 -0.3
2,394,925 + +0.3
2,394,925 + -0.1
2,394,925 + -0.5
2,394,925 + -1.7
2,394,926 - +0.4
2,394,983 + +0.8
2,394,984 - -0.0
2,395,004 + +0.1
2,395,004 + -0.0
2,395,004 + -0.5
2,395,004 + -0.7
2,395,004 + +1.0
2,395,004 + +0.4
2,395,004 + +0.1
2,395,005 - +0.2
2,395,005 - +0.3
2,395,241 - ABZR86_RS10770 0.65 +0.8
2,395,271 + ABZR86_RS10770 0.74 +0.6
2,395,506 + ABZR86_RS10775 0.23 +0.4
2,395,506 + ABZR86_RS10775 0.23 -0.3
2,395,506 + ABZR86_RS10775 0.23 -0.2
2,395,539 + ABZR86_RS10775 0.32 -0.4
2,395,539 + ABZR86_RS10775 0.32 -0.0
2,395,549 - ABZR86_RS10775 0.34 +0.3
2,395,549 - ABZR86_RS10775 0.34 +1.3
2,395,560 + ABZR86_RS10775 0.37 +0.5
2,395,560 + ABZR86_RS10775 0.37 +0.2
2,395,560 + ABZR86_RS10775 0.37 -0.2
2,395,561 - ABZR86_RS10775 0.38 +0.2
2,395,561 - ABZR86_RS10775 0.38 -0.4
2,395,561 - ABZR86_RS10775 0.38 +2.1
2,395,561 - ABZR86_RS10775 0.38 -0.0
2,395,561 - ABZR86_RS10775 0.38 +0.5
2,395,563 + ABZR86_RS10775 0.38 +0.4
2,395,563 + ABZR86_RS10775 0.38 -0.2
2,395,563 + ABZR86_RS10775 0.38 -0.1
2,395,563 + ABZR86_RS10775 0.38 -0.7
2,395,563 + ABZR86_RS10775 0.38 +2.8
2,395,563 + ABZR86_RS10775 0.38 +0.2
2,395,563 + ABZR86_RS10775 0.38 +0.2
2,395,564 - ABZR86_RS10775 0.39 +0.1
2,395,564 - ABZR86_RS10775 0.39 -0.0
2,395,564 - ABZR86_RS10775 0.39 +0.7
2,395,575 + ABZR86_RS10775 0.42 +0.2
2,395,575 + ABZR86_RS10775 0.42 -0.1
2,395,575 + ABZR86_RS10775 0.42 +1.1
2,395,576 - ABZR86_RS10775 0.42 +0.8
2,395,578 + ABZR86_RS10775 0.42 +0.5
2,395,578 + ABZR86_RS10775 0.42 -1.7
2,395,579 - ABZR86_RS10775 0.43 -0.2
2,395,579 - ABZR86_RS10775 0.43 -0.0
2,395,608 + ABZR86_RS10775 0.51 +0.2
2,395,609 - ABZR86_RS10775 0.51 +0.7
2,395,775 + -0.2
2,395,776 - +0.1

Or see this region's nucleotide sequence