Experiment: D-Fructose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS05840 and ABZR86_RS05845 are separated by 32 nucleotides ABZR86_RS05845 and ABZR86_RS05850 are separated by 107 nucleotides ABZR86_RS05850 and ABZR86_RS05855 are separated by 228 nucleotides
ABZR86_RS05840: ABZR86_RS05840 - serine hydrolase domain-containing protein, at 1,310,497 to 1,311,744
_RS05840
ABZR86_RS05845: ABZR86_RS05845 - DUF2884 family protein, at 1,311,777 to 1,312,322
_RS05845
ABZR86_RS05850: ABZR86_RS05850 - dihydrofolate reductase family protein, at 1,312,430 to 1,313,011
_RS05850
ABZR86_RS05855: ABZR86_RS05855 - class II fumarate hydratase, at 1,313,240 to 1,314,637
_RS05855
Position (kb)
1311
1312
1313 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1310.785 kb on + strand, within ABZR86_RS05840 at 1310.785 kb on + strand, within ABZR86_RS05840 at 1310.786 kb on - strand, within ABZR86_RS05840 at 1310.786 kb on - strand, within ABZR86_RS05840 at 1310.879 kb on - strand, within ABZR86_RS05840 at 1310.965 kb on + strand, within ABZR86_RS05840 at 1310.966 kb on - strand, within ABZR86_RS05840 at 1310.966 kb on - strand, within ABZR86_RS05840 at 1310.989 kb on + strand, within ABZR86_RS05840 at 1310.989 kb on + strand, within ABZR86_RS05840 at 1310.989 kb on + strand, within ABZR86_RS05840 at 1310.990 kb on - strand, within ABZR86_RS05840 at 1310.990 kb on - strand, within ABZR86_RS05840 at 1310.990 kb on - strand, within ABZR86_RS05840 at 1311.017 kb on - strand, within ABZR86_RS05840 at 1311.017 kb on - strand, within ABZR86_RS05840 at 1311.044 kb on - strand, within ABZR86_RS05840 at 1311.044 kb on - strand, within ABZR86_RS05840 at 1311.595 kb on + strand, within ABZR86_RS05840 at 1311.595 kb on + strand, within ABZR86_RS05840 at 1311.596 kb on - strand, within ABZR86_RS05840 at 1311.596 kb on - strand, within ABZR86_RS05840 at 1311.596 kb on - strand, within ABZR86_RS05840 at 1311.596 kb on - strand, within ABZR86_RS05840 at 1311.596 kb on - strand, within ABZR86_RS05840 at 1311.601 kb on + strand, within ABZR86_RS05840 at 1311.601 kb on + strand, within ABZR86_RS05840 at 1311.601 kb on + strand, within ABZR86_RS05840 at 1311.602 kb on - strand, within ABZR86_RS05840 at 1311.635 kb on - strand at 1311.635 kb on - strand at 1311.657 kb on + strand at 1311.664 kb on + strand at 1311.665 kb on - strand at 1311.774 kb on + strand at 1311.774 kb on + strand at 1311.774 kb on + strand at 1311.774 kb on + strand at 1311.774 kb on + strand at 1311.774 kb on + strand at 1311.774 kb on + strand at 1311.774 kb on + strand at 1311.775 kb on - strand at 1311.775 kb on - strand at 1311.775 kb on - strand at 1311.775 kb on - strand at 1311.775 kb on - strand at 1311.846 kb on + strand, within ABZR86_RS05845 at 1311.846 kb on + strand, within ABZR86_RS05845 at 1311.846 kb on + strand, within ABZR86_RS05845 at 1311.847 kb on - strand, within ABZR86_RS05845 at 1311.847 kb on - strand, within ABZR86_RS05845 at 1311.847 kb on - strand, within ABZR86_RS05845 at 1311.847 kb on - strand, within ABZR86_RS05845 at 1311.847 kb on - strand, within ABZR86_RS05845 at 1311.847 kb on - strand, within ABZR86_RS05845 at 1311.847 kb on - strand, within ABZR86_RS05845 at 1311.847 kb on - strand, within ABZR86_RS05845 at 1311.848 kb on + strand, within ABZR86_RS05845 at 1311.848 kb on + strand, within ABZR86_RS05845 at 1311.848 kb on + strand, within ABZR86_RS05845 at 1311.848 kb on + strand, within ABZR86_RS05845 at 1311.849 kb on - strand, within ABZR86_RS05845 at 1311.849 kb on - strand, within ABZR86_RS05845 at 1312.006 kb on - strand, within ABZR86_RS05845 at 1312.008 kb on + strand, within ABZR86_RS05845 at 1312.008 kb on + strand, within ABZR86_RS05845 at 1312.009 kb on - strand, within ABZR86_RS05845 at 1312.009 kb on - strand, within ABZR86_RS05845 at 1312.009 kb on - strand, within ABZR86_RS05845 at 1312.421 kb on + strand at 1312.421 kb on + strand at 1312.421 kb on + strand at 1312.421 kb on + strand at 1312.431 kb on + strand at 1312.848 kb on + strand, within ABZR86_RS05850 at 1312.848 kb on + strand, within ABZR86_RS05850 at 1312.849 kb on - strand, within ABZR86_RS05850 at 1312.968 kb on + strand at 1312.968 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Fructose (C) remove 1,310,785 + ABZR86_RS05840 0.23 +2.4 1,310,785 + ABZR86_RS05840 0.23 -0.1 1,310,786 - ABZR86_RS05840 0.23 +0.4 1,310,786 - ABZR86_RS05840 0.23 -0.7 1,310,879 - ABZR86_RS05840 0.31 +0.8 1,310,965 + ABZR86_RS05840 0.38 +0.3 1,310,966 - ABZR86_RS05840 0.38 +0.6 1,310,966 - ABZR86_RS05840 0.38 +0.5 1,310,989 + ABZR86_RS05840 0.39 -1.6 1,310,989 + ABZR86_RS05840 0.39 -0.3 1,310,989 + ABZR86_RS05840 0.39 -1.2 1,310,990 - ABZR86_RS05840 0.40 -0.5 1,310,990 - ABZR86_RS05840 0.40 -0.2 1,310,990 - ABZR86_RS05840 0.40 -0.7 1,311,017 - ABZR86_RS05840 0.42 -0.4 1,311,017 - ABZR86_RS05840 0.42 +0.4 1,311,044 - ABZR86_RS05840 0.44 -0.6 1,311,044 - ABZR86_RS05840 0.44 -0.2 1,311,595 + ABZR86_RS05840 0.88 +0.3 1,311,595 + ABZR86_RS05840 0.88 +0.0 1,311,596 - ABZR86_RS05840 0.88 +0.2 1,311,596 - ABZR86_RS05840 0.88 +0.2 1,311,596 - ABZR86_RS05840 0.88 +0.6 1,311,596 - ABZR86_RS05840 0.88 +0.7 1,311,596 - ABZR86_RS05840 0.88 +0.8 1,311,601 + ABZR86_RS05840 0.88 +0.7 1,311,601 + ABZR86_RS05840 0.88 +0.2 1,311,601 + ABZR86_RS05840 0.88 +0.3 1,311,602 - ABZR86_RS05840 0.89 +0.8 1,311,635 - +1.6 1,311,635 - +0.5 1,311,657 + -2.0 1,311,664 + -0.2 1,311,665 - -0.8 1,311,774 + +0.8 1,311,774 + +0.7 1,311,774 + +0.6 1,311,774 + +0.1 1,311,774 + -0.5 1,311,774 + -0.3 1,311,774 + +0.0 1,311,774 + +0.4 1,311,775 - +0.8 1,311,775 - +0.3 1,311,775 - +0.2 1,311,775 - +0.8 1,311,775 - +0.4 1,311,846 + ABZR86_RS05845 0.13 +0.2 1,311,846 + ABZR86_RS05845 0.13 -0.1 1,311,846 + ABZR86_RS05845 0.13 +0.5 1,311,847 - ABZR86_RS05845 0.13 +0.7 1,311,847 - ABZR86_RS05845 0.13 -0.7 1,311,847 - ABZR86_RS05845 0.13 +0.6 1,311,847 - ABZR86_RS05845 0.13 +2.4 1,311,847 - ABZR86_RS05845 0.13 +0.0 1,311,847 - ABZR86_RS05845 0.13 -1.2 1,311,847 - ABZR86_RS05845 0.13 -0.8 1,311,847 - ABZR86_RS05845 0.13 -0.2 1,311,848 + ABZR86_RS05845 0.13 -0.7 1,311,848 + ABZR86_RS05845 0.13 -0.0 1,311,848 + ABZR86_RS05845 0.13 -0.1 1,311,848 + ABZR86_RS05845 0.13 -0.3 1,311,849 - ABZR86_RS05845 0.13 +0.1 1,311,849 - ABZR86_RS05845 0.13 +1.6 1,312,006 - ABZR86_RS05845 0.42 -0.4 1,312,008 + ABZR86_RS05845 0.42 -0.3 1,312,008 + ABZR86_RS05845 0.42 +0.3 1,312,009 - ABZR86_RS05845 0.42 +0.5 1,312,009 - ABZR86_RS05845 0.42 -0.7 1,312,009 - ABZR86_RS05845 0.42 -0.2 1,312,421 + +0.5 1,312,421 + -0.3 1,312,421 + +0.4 1,312,421 + +1.6 1,312,431 + -0.2 1,312,848 + ABZR86_RS05850 0.72 +0.4 1,312,848 + ABZR86_RS05850 0.72 +0.5 1,312,849 - ABZR86_RS05850 0.72 -0.2 1,312,968 + -0.4 1,312,968 + +1.0
Or see this region's nucleotide sequence