Experiment: D-Fructose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS05230 and ABZR86_RS05235 are separated by 92 nucleotides ABZR86_RS05235 and ABZR86_RS05240 are separated by 43 nucleotides ABZR86_RS05240 and ABZR86_RS05245 are separated by 211 nucleotides ABZR86_RS05245 and ABZR86_RS05250 overlap by 32 nucleotides
ABZR86_RS05230: ABZR86_RS05230 - TetR family transcriptional regulator, at 1,178,805 to 1,179,437
_RS05230
ABZR86_RS05235: ABZR86_RS05235 - O-methyltransferase, at 1,179,530 to 1,180,186
_RS05235
ABZR86_RS05240: ABZR86_RS05240 - hypothetical protein, at 1,180,230 to 1,180,463
_RS05240
ABZR86_RS05245: ABZR86_RS05245 - cupin domain-containing protein, at 1,180,675 to 1,181,418
_RS05245
ABZR86_RS05250: ABZR86_RS05250 - hypothetical protein, at 1,181,387 to 1,182,085
_RS05250
Position (kb)
1180
1181 Strain fitness (log2 ratio)
-1
0
1 at 1179.253 kb on + strand, within ABZR86_RS05230 at 1179.253 kb on + strand, within ABZR86_RS05230 at 1179.253 kb on + strand, within ABZR86_RS05230 at 1179.254 kb on - strand, within ABZR86_RS05230 at 1179.254 kb on - strand, within ABZR86_RS05230 at 1179.260 kb on - strand, within ABZR86_RS05230 at 1179.260 kb on - strand, within ABZR86_RS05230 at 1179.503 kb on + strand at 1179.542 kb on - strand at 1179.547 kb on + strand at 1179.548 kb on - strand at 1179.665 kb on + strand, within ABZR86_RS05235 at 1179.665 kb on + strand, within ABZR86_RS05235 at 1179.734 kb on + strand, within ABZR86_RS05235 at 1179.734 kb on + strand, within ABZR86_RS05235 at 1179.734 kb on + strand, within ABZR86_RS05235 at 1179.734 kb on + strand, within ABZR86_RS05235 at 1179.734 kb on + strand, within ABZR86_RS05235 at 1179.735 kb on - strand, within ABZR86_RS05235 at 1179.735 kb on - strand, within ABZR86_RS05235 at 1180.133 kb on + strand at 1180.254 kb on - strand, within ABZR86_RS05240 at 1180.348 kb on - strand, within ABZR86_RS05240 at 1180.348 kb on - strand, within ABZR86_RS05240 at 1180.348 kb on - strand, within ABZR86_RS05240 at 1180.498 kb on + strand at 1180.498 kb on + strand at 1180.499 kb on - strand at 1180.506 kb on + strand at 1180.602 kb on + strand at 1180.645 kb on - strand at 1180.662 kb on + strand at 1180.662 kb on + strand at 1180.663 kb on - strand at 1180.688 kb on + strand at 1180.825 kb on + strand, within ABZR86_RS05245 at 1180.826 kb on - strand, within ABZR86_RS05245 at 1180.873 kb on + strand, within ABZR86_RS05245 at 1180.873 kb on + strand, within ABZR86_RS05245 at 1180.874 kb on - strand, within ABZR86_RS05245 at 1180.888 kb on - strand, within ABZR86_RS05245 at 1180.888 kb on - strand, within ABZR86_RS05245 at 1180.888 kb on - strand, within ABZR86_RS05245 at 1180.951 kb on + strand, within ABZR86_RS05245 at 1180.951 kb on + strand, within ABZR86_RS05245 at 1180.952 kb on - strand, within ABZR86_RS05245 at 1181.068 kb on + strand, within ABZR86_RS05245 at 1181.068 kb on + strand, within ABZR86_RS05245 at 1181.068 kb on + strand, within ABZR86_RS05245 at 1181.068 kb on + strand, within ABZR86_RS05245 at 1181.068 kb on + strand, within ABZR86_RS05245 at 1181.069 kb on - strand, within ABZR86_RS05245 at 1181.069 kb on - strand, within ABZR86_RS05245 at 1181.069 kb on - strand, within ABZR86_RS05245 at 1181.069 kb on - strand, within ABZR86_RS05245 at 1181.069 kb on - strand, within ABZR86_RS05245 at 1181.137 kb on + strand, within ABZR86_RS05245 at 1181.137 kb on + strand, within ABZR86_RS05245 at 1181.137 kb on + strand, within ABZR86_RS05245 at 1181.137 kb on + strand, within ABZR86_RS05245 at 1181.137 kb on + strand, within ABZR86_RS05245 at 1181.137 kb on + strand, within ABZR86_RS05245 at 1181.138 kb on - strand, within ABZR86_RS05245 at 1181.138 kb on - strand, within ABZR86_RS05245 at 1181.138 kb on - strand, within ABZR86_RS05245 at 1181.138 kb on - strand, within ABZR86_RS05245 at 1181.138 kb on - strand, within ABZR86_RS05245 at 1181.239 kb on - strand, within ABZR86_RS05245 at 1181.240 kb on - strand, within ABZR86_RS05245 at 1181.388 kb on + strand at 1181.388 kb on + strand at 1181.389 kb on - strand at 1181.389 kb on - strand at 1181.389 kb on - strand at 1181.389 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Fructose (C) remove 1,179,253 + ABZR86_RS05230 0.71 -1.4 1,179,253 + ABZR86_RS05230 0.71 -0.0 1,179,253 + ABZR86_RS05230 0.71 -0.0 1,179,254 - ABZR86_RS05230 0.71 -0.5 1,179,254 - ABZR86_RS05230 0.71 +1.1 1,179,260 - ABZR86_RS05230 0.72 +0.0 1,179,260 - ABZR86_RS05230 0.72 -0.7 1,179,503 + +0.9 1,179,542 - +1.3 1,179,547 + -0.5 1,179,548 - +0.5 1,179,665 + ABZR86_RS05235 0.21 -0.8 1,179,665 + ABZR86_RS05235 0.21 -0.8 1,179,734 + ABZR86_RS05235 0.31 +0.2 1,179,734 + ABZR86_RS05235 0.31 +0.1 1,179,734 + ABZR86_RS05235 0.31 +0.3 1,179,734 + ABZR86_RS05235 0.31 +0.1 1,179,734 + ABZR86_RS05235 0.31 -0.3 1,179,735 - ABZR86_RS05235 0.31 +1.0 1,179,735 - ABZR86_RS05235 0.31 +0.7 1,180,133 + -0.0 1,180,254 - ABZR86_RS05240 0.10 -0.5 1,180,348 - ABZR86_RS05240 0.50 -0.2 1,180,348 - ABZR86_RS05240 0.50 +0.7 1,180,348 - ABZR86_RS05240 0.50 +0.3 1,180,498 + +0.5 1,180,498 + +0.6 1,180,499 - +0.5 1,180,506 + -0.0 1,180,602 + -0.2 1,180,645 - +0.3 1,180,662 + -1.0 1,180,662 + -0.1 1,180,663 - +1.3 1,180,688 + +0.5 1,180,825 + ABZR86_RS05245 0.20 +0.2 1,180,826 - ABZR86_RS05245 0.20 +1.4 1,180,873 + ABZR86_RS05245 0.27 -0.2 1,180,873 + ABZR86_RS05245 0.27 +0.3 1,180,874 - ABZR86_RS05245 0.27 +0.0 1,180,888 - ABZR86_RS05245 0.29 +0.3 1,180,888 - ABZR86_RS05245 0.29 -0.1 1,180,888 - ABZR86_RS05245 0.29 +1.2 1,180,951 + ABZR86_RS05245 0.37 +0.7 1,180,951 + ABZR86_RS05245 0.37 -0.1 1,180,952 - ABZR86_RS05245 0.37 -0.4 1,181,068 + ABZR86_RS05245 0.53 +0.5 1,181,068 + ABZR86_RS05245 0.53 -0.0 1,181,068 + ABZR86_RS05245 0.53 -0.8 1,181,068 + ABZR86_RS05245 0.53 -0.5 1,181,068 + ABZR86_RS05245 0.53 -0.1 1,181,069 - ABZR86_RS05245 0.53 +0.3 1,181,069 - ABZR86_RS05245 0.53 +0.1 1,181,069 - ABZR86_RS05245 0.53 +0.0 1,181,069 - ABZR86_RS05245 0.53 -0.4 1,181,069 - ABZR86_RS05245 0.53 +0.1 1,181,137 + ABZR86_RS05245 0.62 -0.3 1,181,137 + ABZR86_RS05245 0.62 -0.3 1,181,137 + ABZR86_RS05245 0.62 +0.5 1,181,137 + ABZR86_RS05245 0.62 +1.2 1,181,137 + ABZR86_RS05245 0.62 +0.3 1,181,137 + ABZR86_RS05245 0.62 -0.0 1,181,138 - ABZR86_RS05245 0.62 -0.6 1,181,138 - ABZR86_RS05245 0.62 -0.1 1,181,138 - ABZR86_RS05245 0.62 +0.3 1,181,138 - ABZR86_RS05245 0.62 -0.1 1,181,138 - ABZR86_RS05245 0.62 -0.8 1,181,239 - ABZR86_RS05245 0.76 +1.1 1,181,240 - ABZR86_RS05245 0.76 +0.6 1,181,388 + +0.8 1,181,388 + +0.2 1,181,389 - +0.1 1,181,389 - +1.5 1,181,389 - +1.7 1,181,389 - -0.1
Or see this region's nucleotide sequence