Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2239

Experiment: MoYLS4 with nitrite 1.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MoYLS4 with nitrite 1.25 mg/ml
2,801,204	-		DvMF_2237	0.83	-0.2
2,801,409	-				-0.2
2,801,478	+				-0.2
2,801,496	-				-0.7
2,801,921	+		DvMF_2238	0.56	+0.0
2,801,986	-		DvMF_2238	0.69	-0.4
2,802,012	+		DvMF_2238	0.74	-0.5
2,802,028	+		DvMF_2238	0.77	-0.4
2,802,061	-		DvMF_2238	0.84	-0.2
2,802,076	+		DvMF_2238	0.87	-0.7
2,802,076	-		DvMF_2238	0.87	+0.1
2,802,107	+				-0.4
2,802,271	-				-0.2
2,802,304	+				-0.3
2,802,367	+				-0.3
2,802,597	-		DvMF_2239	0.12	+0.1
2,802,617	+		DvMF_2239	0.12	-0.0
2,802,617	+		DvMF_2239	0.12	-1.0
2,802,642	+		DvMF_2239	0.13	-0.3
2,802,798	-		DvMF_2239	0.17	-0.4
2,802,854	+		DvMF_2239	0.18	-0.4
2,802,864	+		DvMF_2239	0.19	-0.5
2,803,041	-		DvMF_2239	0.24	-0.2
2,803,044	+		DvMF_2239	0.24	-0.7
2,803,457	+		DvMF_2239	0.35	-0.1
2,803,524	-		DvMF_2239	0.37	+0.2
2,803,683	-		DvMF_2239	0.41	-0.1
2,803,826	-		DvMF_2239	0.45	+0.0
2,803,828	+		DvMF_2239	0.45	+0.2
2,803,843	+		DvMF_2239	0.45	+0.4
2,803,876	-		DvMF_2239	0.46	-0.4
2,803,979	-		DvMF_2239	0.49	-0.1
2,804,009	-		DvMF_2239	0.50	-0.1
2,804,067	+		DvMF_2239	0.51	+0.4
2,804,111	+		DvMF_2239	0.52	+0.1
2,804,252	-		DvMF_2239	0.56	-0.6
2,804,270	+		DvMF_2239	0.57	+0.6
2,804,278	-		DvMF_2239	0.57	-0.2
2,804,304	-		DvMF_2239	0.58	-0.1
2,804,435	+		DvMF_2239	0.61	-0.1
2,804,513	+		DvMF_2239	0.63	+0.2
2,804,521	-		DvMF_2239	0.63	-0.9
2,804,566	-		DvMF_2239	0.65	-0.2
2,804,590	-		DvMF_2239	0.65	-0.2
2,804,654	-		DvMF_2239	0.67	-0.2
2,804,814	+		DvMF_2239	0.71	+0.6
2,804,814	+		DvMF_2239	0.71	+0.0
2,804,814	+		DvMF_2239	0.71	-0.4
2,804,814	+		DvMF_2239	0.71	-0.0
2,804,820	-		DvMF_2239	0.72	+0.2
2,804,822	-		DvMF_2239	0.72	-0.3
2,804,822	-		DvMF_2239	0.72	-0.2
2,805,158	+		DvMF_2239	0.81	-0.2
2,805,215	+		DvMF_2239	0.82	+0.1
2,805,277	-		DvMF_2239	0.84	-0.4
2,805,552	+				-0.3
2,805,579	+				-0.4
2,805,625	-				-0.1
2,805,856	-				-0.2
2,805,959	-				-0.4
2,805,982	+				-0.5
2,805,997	+				-0.6
2,806,097	+				+0.4
2,806,442	+				+0.2