Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_0788
Experiment: MoYLS4 with nitrite 1.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with nitrite 1.25 mg/ml |
---|---|---|---|---|---|
remove | |||||
946,399 | - | DvMF_0787 | 0.84 | -0.6 | |
946,530 | + | -2.0 | |||
946,584 | + | -4.4 | |||
946,621 | - | -3.0 | |||
947,009 | + | -0.7 | |||
947,084 | - | +0.0 | |||
947,108 | - | +0.0 | |||
947,394 | - | DvMF_0788 | 0.18 | -0.3 | |
947,667 | - | DvMF_0788 | 0.34 | -0.4 | |
947,832 | - | DvMF_0788 | 0.44 | -0.0 | |
948,111 | + | DvMF_0788 | 0.60 | -0.1 | |
948,234 | - | DvMF_0788 | 0.67 | +0.2 | |
948,250 | - | DvMF_0788 | 0.68 | -0.3 | |
948,311 | - | DvMF_0788 | 0.71 | -0.4 | |
948,334 | - | DvMF_0788 | 0.73 | +0.2 | |
948,409 | - | DvMF_0788 | 0.77 | -0.0 | |
948,463 | + | DvMF_0788 | 0.80 | -0.5 | |
948,465 | + | DvMF_0788 | 0.80 | -0.3 | |
948,767 | - | -0.5 | |||
948,767 | - | +0.5 | |||
948,829 | + | -0.1 |
Or see this region's nucleotide sequence