Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5380

Experiment: D-Galactose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Galactose (C)
6,180,498	+		Pf6N2E2_5379	0.20	+2.2
6,180,498	+		Pf6N2E2_5379	0.20	+1.9
6,180,498	+		Pf6N2E2_5379	0.20	+1.7
6,180,498	+		Pf6N2E2_5379	0.20	-0.1
6,180,498	+		Pf6N2E2_5379	0.20	+1.5
6,180,498	+		Pf6N2E2_5379	0.20	+0.9
6,180,499	-		Pf6N2E2_5379	0.20	+0.5
6,180,567	+		Pf6N2E2_5379	0.26	-0.1
6,180,567	+		Pf6N2E2_5379	0.26	+1.2
6,180,568	-		Pf6N2E2_5379	0.26	+0.3
6,180,973	-		Pf6N2E2_5379	0.61	+0.6
6,180,973	-		Pf6N2E2_5379	0.61	+1.2
6,181,110	+		Pf6N2E2_5379	0.72	+1.5
6,181,110	+		Pf6N2E2_5379	0.72	+2.2
6,181,110	+		Pf6N2E2_5379	0.72	+1.6
6,181,111	-		Pf6N2E2_5379	0.72	+0.3
6,181,167	+		Pf6N2E2_5379	0.77	+1.8
6,181,168	-		Pf6N2E2_5379	0.77	-0.0
6,181,168	-		Pf6N2E2_5379	0.77	+0.6
6,181,224	+		Pf6N2E2_5379	0.82	+0.8
6,181,225	-		Pf6N2E2_5379	0.82	+0.5
6,181,410	+				+2.1
6,181,410	+				+1.1
6,181,411	-				+2.1
6,181,421	+				+1.6
6,181,460	+				+0.8
6,181,460	+				+1.1
6,181,461	-				-0.5
6,181,461	-				-3.2
6,181,461	-				+0.7
6,181,461	-				+0.2
6,181,542	-				+1.5
6,181,565	+				+1.0
6,181,602	-				-0.7
6,181,730	+		Pf6N2E2_5380	0.18	+0.3
6,181,730	+		Pf6N2E2_5380	0.18	+0.7
6,181,766	+		Pf6N2E2_5380	0.20	+0.7
6,181,766	+		Pf6N2E2_5380	0.20	+0.6
6,181,766	+		Pf6N2E2_5380	0.20	-2.0
6,181,766	+		Pf6N2E2_5380	0.20	+1.1
6,181,766	+		Pf6N2E2_5380	0.20	+1.3
6,181,766	+		Pf6N2E2_5380	0.20	+0.2
6,181,767	-		Pf6N2E2_5380	0.20	+0.0
6,181,859	+		Pf6N2E2_5380	0.26	-0.1
6,181,859	+		Pf6N2E2_5380	0.26	+0.5
6,181,860	-		Pf6N2E2_5380	0.26	-1.7
6,181,860	-		Pf6N2E2_5380	0.26	-1.1
6,181,860	-		Pf6N2E2_5380	0.26	+0.7
6,182,030	+		Pf6N2E2_5380	0.37	+0.3
6,182,030	+		Pf6N2E2_5380	0.37	+0.9
6,182,030	+		Pf6N2E2_5380	0.37	+1.1
6,182,030	+		Pf6N2E2_5380	0.37	+0.9
6,182,030	+		Pf6N2E2_5380	0.37	+1.6
6,182,031	-		Pf6N2E2_5380	0.37	-0.2
6,182,031	-		Pf6N2E2_5380	0.37	+0.6
6,182,031	-		Pf6N2E2_5380	0.37	+0.6
6,182,031	-		Pf6N2E2_5380	0.37	-2.3
6,182,090	+		Pf6N2E2_5380	0.41	+0.9
6,182,091	-		Pf6N2E2_5380	0.41	+1.0
6,182,132	+		Pf6N2E2_5380	0.44	+1.1
6,182,132	+		Pf6N2E2_5380	0.44	+0.7
6,182,132	+		Pf6N2E2_5380	0.44	+3.0
6,182,132	+		Pf6N2E2_5380	0.44	+1.5
6,182,132	+		Pf6N2E2_5380	0.44	+0.5
6,182,132	+		Pf6N2E2_5380	0.44	+0.3
6,182,133	-		Pf6N2E2_5380	0.44	+0.3
6,182,133	-		Pf6N2E2_5380	0.44	+0.7
6,182,133	-		Pf6N2E2_5380	0.44	+0.9
6,182,133	-		Pf6N2E2_5380	0.44	+0.9
6,182,133	-		Pf6N2E2_5380	0.44	-0.1
6,182,133	-		Pf6N2E2_5380	0.44	+0.6
6,182,139	-		Pf6N2E2_5380	0.44	+2.1
6,182,139	-		Pf6N2E2_5380	0.44	+0.7
6,182,207	+		Pf6N2E2_5380	0.49	+1.2
6,182,207	+		Pf6N2E2_5380	0.49	+1.4
6,182,208	-		Pf6N2E2_5380	0.49	+1.8
6,182,208	-		Pf6N2E2_5380	0.49	+1.8
6,182,208	-		Pf6N2E2_5380	0.49	+1.6
6,182,294	+		Pf6N2E2_5380	0.54	+0.5
6,182,308	-		Pf6N2E2_5380	0.55	+1.0
6,182,309	+		Pf6N2E2_5380	0.55	+1.3
6,182,310	-		Pf6N2E2_5380	0.55	+0.9
6,182,310	-		Pf6N2E2_5380	0.55	+2.9
6,182,466	+		Pf6N2E2_5380	0.65	+0.9
6,182,606	+		Pf6N2E2_5380	0.74	+1.6
6,182,606	+		Pf6N2E2_5380	0.74	+0.7
6,182,607	-		Pf6N2E2_5380	0.74	+1.3
6,182,607	-		Pf6N2E2_5380	0.74	+1.3
6,182,607	-		Pf6N2E2_5380	0.74	+0.4
6,182,607	-		Pf6N2E2_5380	0.74	+1.7
6,182,607	-		Pf6N2E2_5380	0.74	+2.2
6,182,607	-		Pf6N2E2_5380	0.74	+1.1
6,182,607	-		Pf6N2E2_5380	0.74	+0.8
6,182,627	+		Pf6N2E2_5380	0.75	+1.4
6,182,627	+		Pf6N2E2_5380	0.75	+0.9
6,182,627	+		Pf6N2E2_5380	0.75	+3.2
6,182,627	+		Pf6N2E2_5380	0.75	-0.1
6,182,738	+		Pf6N2E2_5380	0.82	+0.2
6,182,738	+		Pf6N2E2_5380	0.82	+0.8
6,182,738	+		Pf6N2E2_5380	0.82	+1.1
6,182,837	+		Pf6N2E2_5380	0.89	+1.1
6,182,838	-		Pf6N2E2_5380	0.89	-0.7
6,182,838	-		Pf6N2E2_5380	0.89	+0.2
6,182,838	-		Pf6N2E2_5380	0.89	+0.5
6,182,894	+				+0.2
6,182,894	+				+0.5
6,182,894	+				+0.8
6,182,895	-				-0.2
6,182,895	-				+1.3
6,182,895	-				+2.3
6,182,895	-				+0.5
6,182,903	+				+1.1
6,182,903	+				+0.3
6,182,903	+				-0.1
6,182,951	+				+0.8
6,182,951	+				+1.5
6,182,952	-				+0.4
6,182,952	-				+1.4
6,182,952	-				+1.1
6,182,954	+				+0.4
6,182,954	+				+0.8
6,182,954	+				+1.6
6,182,955	-				-0.4
6,182,955	-				+1.3
6,183,007	+				-0.3
6,183,007	+				+0.9
6,183,008	-				+0.1
6,183,088	+				+0.5
6,183,088	+				+0.3
6,183,089	-				+2.0
6,183,103	+				+2.6
6,183,103	+				+0.4
6,183,103	+				-0.6
6,183,103	+				+0.9
6,183,103	+				+2.0
6,183,103	+				+0.2
6,183,103	+				+1.2
6,183,103	+				+1.2
6,183,103	+				+0.8
6,183,104	-				+0.2
6,183,104	-				+1.2
6,183,104	-				+0.2
6,183,104	-				+1.2
6,183,104	-				+1.4
6,183,104	-				+0.7
6,183,258	+				+0.3
6,183,345	+		Pf6N2E2_5381	0.11	+1.2
6,183,345	+		Pf6N2E2_5381	0.11	+0.3
6,183,346	-		Pf6N2E2_5381	0.11	-0.7
6,183,564	+		Pf6N2E2_5381	0.30	+1.2
6,183,564	+		Pf6N2E2_5381	0.30	+0.5
6,183,564	+		Pf6N2E2_5381	0.30	+0.3
6,183,564	+		Pf6N2E2_5381	0.30	+1.1
6,183,564	+		Pf6N2E2_5381	0.30	+1.6
6,183,564	+		Pf6N2E2_5381	0.30	-0.1
6,183,564	+		Pf6N2E2_5381	0.30	+0.5
6,183,564	+		Pf6N2E2_5381	0.30	+1.6
6,183,564	+		Pf6N2E2_5381	0.30	+0.8
6,183,651	+		Pf6N2E2_5381	0.38	-3.8
6,183,651	+		Pf6N2E2_5381	0.38	-0.2
6,183,651	+		Pf6N2E2_5381	0.38	-0.9
6,183,876	+		Pf6N2E2_5381	0.58	+0.3
6,183,876	+		Pf6N2E2_5381	0.58	+0.2
6,183,876	+		Pf6N2E2_5381	0.58	-0.9
6,183,877	-		Pf6N2E2_5381	0.58	-1.3
6,183,877	-		Pf6N2E2_5381	0.58	-0.1
6,183,877	-		Pf6N2E2_5381	0.58	-0.1
6,183,877	-		Pf6N2E2_5381	0.58	-0.2
6,183,877	-		Pf6N2E2_5381	0.58	-2.4