Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5377

Experiment: D-Galactose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Galactose (C)
6,177,192	-		Pf6N2E2_5375	0.86	+0.6
6,177,192	-		Pf6N2E2_5375	0.86	-0.6
6,177,529	+		Pf6N2E2_5376	0.40	+0.8
6,177,530	-		Pf6N2E2_5376	0.40	+0.4
6,177,530	-		Pf6N2E2_5376	0.40	-0.3
6,177,627	-		Pf6N2E2_5376	0.61	+0.8
6,177,628	+		Pf6N2E2_5376	0.62	+0.2
6,177,628	+		Pf6N2E2_5376	0.62	+0.8
6,177,628	+		Pf6N2E2_5376	0.62	-0.6
6,177,628	+		Pf6N2E2_5376	0.62	+0.1
6,177,628	+		Pf6N2E2_5376	0.62	+0.2
6,177,628	+		Pf6N2E2_5376	0.62	+0.1
6,177,628	+		Pf6N2E2_5376	0.62	+0.3
6,177,628	+		Pf6N2E2_5376	0.62	-1.1
6,177,628	+		Pf6N2E2_5376	0.62	+0.7
6,177,629	-		Pf6N2E2_5376	0.62	-0.3
6,177,629	-		Pf6N2E2_5376	0.62	-0.5
6,177,629	-		Pf6N2E2_5376	0.62	-1.9
6,177,629	-		Pf6N2E2_5376	0.62	+1.1
6,177,629	-		Pf6N2E2_5376	0.62	-1.8
6,177,629	-		Pf6N2E2_5376	0.62	+1.9
6,177,629	-		Pf6N2E2_5376	0.62	+0.7
6,177,629	-		Pf6N2E2_5376	0.62	+0.3
6,177,629	-		Pf6N2E2_5376	0.62	-2.1
6,177,633	+		Pf6N2E2_5376	0.63	+0.4
6,177,956	+				+0.7
6,177,956	+				+0.3
6,177,956	+				+0.4
6,177,956	+				+1.6
6,177,957	-				+0.3
6,177,957	-				+1.3
6,177,957	-				+0.9
6,177,957	-				-1.7
6,177,957	-				-1.9
6,177,980	-				+0.2
6,178,033	+				+0.5
6,178,033	+				+1.1
6,178,033	+				+2.1
6,178,034	-				-0.2
6,178,034	-				+0.3
6,178,034	-				-0.1
6,178,072	+				+1.6
6,178,072	+				+3.2
6,178,073	-				+0.9
6,178,153	+		Pf6N2E2_5377	0.12	+1.1
6,178,153	+		Pf6N2E2_5377	0.12	+1.0
6,178,153	+		Pf6N2E2_5377	0.12	-0.8
6,178,153	+		Pf6N2E2_5377	0.12	-0.1
6,178,153	+		Pf6N2E2_5377	0.12	+1.6
6,178,154	-		Pf6N2E2_5377	0.12	-0.3
6,178,154	-		Pf6N2E2_5377	0.12	+0.3
6,178,154	-		Pf6N2E2_5377	0.12	+2.1
6,178,331	-		Pf6N2E2_5377	0.24	+2.0
6,178,331	-		Pf6N2E2_5377	0.24	+1.2
6,178,331	-		Pf6N2E2_5377	0.24	+0.8
6,178,349	-		Pf6N2E2_5377	0.26	+0.1
6,178,682	-		Pf6N2E2_5377	0.48	+0.9
6,178,730	+		Pf6N2E2_5377	0.52	+0.3
6,178,731	-		Pf6N2E2_5377	0.52	+1.3
6,178,731	-		Pf6N2E2_5377	0.52	+0.0
6,178,783	+		Pf6N2E2_5377	0.55	+1.0
6,178,783	+		Pf6N2E2_5377	0.55	+0.2
6,178,783	+		Pf6N2E2_5377	0.55	+2.5
6,178,783	+		Pf6N2E2_5377	0.55	+1.5
6,178,783	+		Pf6N2E2_5377	0.55	+1.6
6,178,783	+		Pf6N2E2_5377	0.55	+1.9
6,178,784	-		Pf6N2E2_5377	0.56	+0.7
6,178,784	-		Pf6N2E2_5377	0.56	+1.7
6,178,784	-		Pf6N2E2_5377	0.56	+1.2
6,178,784	-		Pf6N2E2_5377	0.56	+1.4
6,178,784	-		Pf6N2E2_5377	0.56	+0.7
6,178,784	-		Pf6N2E2_5377	0.56	+1.7
6,178,784	-		Pf6N2E2_5377	0.56	+0.5
6,178,784	-		Pf6N2E2_5377	0.56	+0.9
6,178,861	+		Pf6N2E2_5377	0.61	+1.9
6,178,972	+		Pf6N2E2_5377	0.68	+2.7
6,178,972	+		Pf6N2E2_5377	0.68	+1.1
6,178,972	+		Pf6N2E2_5377	0.68	+1.7
6,178,972	+		Pf6N2E2_5377	0.68	+1.4
6,178,973	-		Pf6N2E2_5377	0.69	+1.9
6,179,219	+		Pf6N2E2_5377	0.85	+0.9
6,179,219	+		Pf6N2E2_5377	0.85	+1.1
6,179,219	+		Pf6N2E2_5377	0.85	+0.6
6,179,219	+		Pf6N2E2_5377	0.85	+0.8
6,179,220	-		Pf6N2E2_5377	0.86	+1.0
6,179,360	+				+1.7
6,179,403	-				+0.2
6,179,436	+				+0.5
6,179,436	+				+0.3
6,179,437	-				+0.7
6,179,460	+				+0.8
6,179,461	-				-0.2
6,179,467	-				-1.2
6,179,467	-				+1.3
6,179,467	-				-0.0
6,179,467	-				+1.9
6,179,467	-				+0.5
6,179,541	-				-0.6
6,179,541	-				+1.0
6,179,561	+				+0.7
6,179,561	+				+1.2
6,179,561	+				+1.9
6,179,582	-				-2.6
6,179,582	-				+0.3
6,179,582	-				+0.2
6,179,582	-				-0.3
6,179,644	+				+1.0
6,179,644	+				+1.8
6,179,644	+				+0.7
6,179,644	+				+1.1
6,179,644	+				+1.8
6,179,926	+		Pf6N2E2_5378	0.52	+1.3
6,179,926	+		Pf6N2E2_5378	0.52	-0.1
6,179,926	+		Pf6N2E2_5378	0.52	+1.4
6,179,926	+		Pf6N2E2_5378	0.52	+0.6
6,179,926	+		Pf6N2E2_5378	0.52	+1.7
6,179,926	+				+1.9
6,179,926	+		Pf6N2E2_5378	0.52	+0.9
6,179,926	+		Pf6N2E2_5378	0.52	+0.4
6,179,926	+		Pf6N2E2_5378	0.52	+1.8
6,179,926	+		Pf6N2E2_5378	0.52	+0.7
6,179,926	+		Pf6N2E2_5378	0.52	+1.7
6,179,926	+		Pf6N2E2_5378	0.52	+1.5
6,179,926	+		Pf6N2E2_5378	0.52	+0.9
6,179,926	+		Pf6N2E2_5378	0.52	+0.3
6,179,927	-		Pf6N2E2_5378	0.52	+1.8
6,179,927	-		Pf6N2E2_5378	0.52	+0.0
6,179,927	-		Pf6N2E2_5378	0.52	+0.1
6,179,927	-		Pf6N2E2_5378	0.52	+0.7
6,179,927	-		Pf6N2E2_5378	0.52	-0.2
6,179,929	+		Pf6N2E2_5378	0.52	+1.1
6,179,929	+		Pf6N2E2_5378	0.52	+1.0
6,179,930	-		Pf6N2E2_5378	0.53	-0.3
6,179,930	-		Pf6N2E2_5378	0.53	+1.0
6,179,930	-		Pf6N2E2_5378	0.53	-2.1
6,179,983	+		Pf6N2E2_5378	0.61	+0.9
6,179,983	+		Pf6N2E2_5378	0.61	+0.2
6,180,088	+		Pf6N2E2_5378	0.76	+0.7
6,180,088	+		Pf6N2E2_5378	0.76	-0.2
6,180,088	+		Pf6N2E2_5378	0.76	+0.3
6,180,088	+		Pf6N2E2_5378	0.76	+0.2
6,180,088	+		Pf6N2E2_5378	0.76	+1.4
6,180,089	-		Pf6N2E2_5378	0.76	+1.6
6,180,089	-		Pf6N2E2_5378	0.76	+0.2
6,180,089	-		Pf6N2E2_5378	0.76	-0.1
6,180,089	-		Pf6N2E2_5378	0.76	+0.3
6,180,092	+		Pf6N2E2_5378	0.77	+0.6
6,180,092	+		Pf6N2E2_5378	0.77	+1.7
6,180,092	+		Pf6N2E2_5378	0.77	+1.2
6,180,092	+		Pf6N2E2_5378	0.77	+1.1
6,180,092	+		Pf6N2E2_5378	0.77	+1.1
6,180,092	+		Pf6N2E2_5378	0.77	+0.4
6,180,092	+		Pf6N2E2_5378	0.77	+1.6
6,180,092	+		Pf6N2E2_5378	0.77	-0.1
6,180,093	-		Pf6N2E2_5378	0.77	+0.9
6,180,093	-		Pf6N2E2_5378	0.77	+1.3
6,180,093	-		Pf6N2E2_5378	0.77	+1.0
6,180,093	-		Pf6N2E2_5378	0.77	-0.4
6,180,093	-		Pf6N2E2_5378	0.77	+2.3
6,180,093	-		Pf6N2E2_5378	0.77	+0.0
6,180,093	-		Pf6N2E2_5378	0.77	+0.9
6,180,093	-		Pf6N2E2_5378	0.77	+0.5
6,180,096	+		Pf6N2E2_5378	0.77	+1.0
6,180,096	+		Pf6N2E2_5378	0.77	+1.2
6,180,096	+		Pf6N2E2_5378	0.77	+0.8
6,180,097	-		Pf6N2E2_5378	0.78	+0.2
6,180,097	-		Pf6N2E2_5378	0.78	+1.5
6,180,097	-		Pf6N2E2_5378	0.78	+0.6
6,180,097	-		Pf6N2E2_5378	0.78	+1.0
6,180,130	+		Pf6N2E2_5378	0.83	+2.5
6,180,230	+				-0.4
6,180,230	+				+1.3
6,180,231	-				+0.2
6,180,231	-				+1.5
6,180,231	-				+0.2
6,180,231	-				+1.1
6,180,390	+		Pf6N2E2_5379	0.11	-0.2
6,180,391	-		Pf6N2E2_5379	0.11	-0.3
6,180,391	-		Pf6N2E2_5379	0.11	-0.6