Experiment: D-Galactose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_5232 and Pf6N2E2_5233 are separated by 13 nucleotides Pf6N2E2_5233 and Pf6N2E2_5234 are separated by 119 nucleotides
Pf6N2E2_5232 - Cell division inhibitor, at 6,030,031 to 6,030,930
_5232
Pf6N2E2_5233 - Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1), at 6,030,944 to 6,031,969
_5233
Pf6N2E2_5234 - Uracil permease, at 6,032,089 to 6,033,363
_5234
Position (kb)
6030
6031
6032 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 6029.944 kb on + strand at 6029.945 kb on - strand at 6029.981 kb on + strand at 6029.989 kb on + strand at 6029.994 kb on + strand at 6029.994 kb on + strand at 6030.038 kb on + strand at 6030.038 kb on + strand at 6030.038 kb on + strand at 6030.038 kb on + strand at 6030.038 kb on + strand at 6030.038 kb on + strand at 6030.038 kb on + strand at 6030.038 kb on + strand at 6030.038 kb on + strand at 6030.038 kb on + strand at 6030.038 kb on + strand at 6030.038 kb on + strand at 6030.038 kb on + strand at 6030.038 kb on + strand at 6030.038 kb on + strand at 6030.038 kb on + strand at 6030.039 kb on - strand at 6030.039 kb on - strand at 6030.039 kb on - strand at 6030.039 kb on - strand at 6030.039 kb on - strand at 6030.039 kb on - strand at 6030.039 kb on - strand at 6030.039 kb on - strand at 6030.039 kb on - strand at 6030.039 kb on - strand at 6030.039 kb on - strand at 6030.039 kb on - strand at 6030.039 kb on - strand at 6030.164 kb on + strand, within Pf6N2E2_5232 at 6030.164 kb on + strand, within Pf6N2E2_5232 at 6030.164 kb on + strand, within Pf6N2E2_5232 at 6030.164 kb on + strand, within Pf6N2E2_5232 at 6030.164 kb on + strand, within Pf6N2E2_5232 at 6030.164 kb on + strand, within Pf6N2E2_5232 at 6030.165 kb on - strand, within Pf6N2E2_5232 at 6030.165 kb on - strand, within Pf6N2E2_5232 at 6030.165 kb on - strand, within Pf6N2E2_5232 at 6030.165 kb on - strand, within Pf6N2E2_5232 at 6030.494 kb on + strand, within Pf6N2E2_5232 at 6030.495 kb on - strand, within Pf6N2E2_5232 at 6030.591 kb on + strand, within Pf6N2E2_5232 at 6030.627 kb on + strand, within Pf6N2E2_5232 at 6030.627 kb on + strand, within Pf6N2E2_5232 at 6030.628 kb on - strand, within Pf6N2E2_5232 at 6030.688 kb on + strand, within Pf6N2E2_5232 at 6030.688 kb on + strand, within Pf6N2E2_5232 at 6030.688 kb on + strand, within Pf6N2E2_5232 at 6030.688 kb on + strand, within Pf6N2E2_5232 at 6030.688 kb on + strand, within Pf6N2E2_5232 at 6030.689 kb on - strand, within Pf6N2E2_5232 at 6030.689 kb on - strand, within Pf6N2E2_5232 at 6030.689 kb on - strand, within Pf6N2E2_5232 at 6030.690 kb on + strand, within Pf6N2E2_5232 at 6030.690 kb on + strand, within Pf6N2E2_5232 at 6030.690 kb on + strand, within Pf6N2E2_5232 at 6030.690 kb on + strand, within Pf6N2E2_5232 at 6030.690 kb on + strand, within Pf6N2E2_5232 at 6030.690 kb on + strand, within Pf6N2E2_5232 at 6030.690 kb on + strand, within Pf6N2E2_5232 at 6030.749 kb on + strand, within Pf6N2E2_5232 at 6030.749 kb on + strand, within Pf6N2E2_5232 at 6030.749 kb on + strand, within Pf6N2E2_5232 at 6030.749 kb on + strand, within Pf6N2E2_5232 at 6030.749 kb on + strand, within Pf6N2E2_5232 at 6030.749 kb on + strand, within Pf6N2E2_5232 at 6030.749 kb on + strand, within Pf6N2E2_5232 at 6030.749 kb on + strand, within Pf6N2E2_5232 at 6031.967 kb on + strand at 6031.967 kb on + strand at 6031.967 kb on + strand at 6031.970 kb on + strand at 6031.971 kb on - strand at 6032.072 kb on + strand at 6032.072 kb on + strand at 6032.072 kb on + strand at 6032.073 kb on - strand at 6032.073 kb on - strand at 6032.073 kb on - strand at 6032.090 kb on + strand at 6032.090 kb on + strand at 6032.090 kb on + strand at 6032.090 kb on + strand at 6032.090 kb on + strand at 6032.091 kb on - strand at 6032.091 kb on - strand at 6032.091 kb on - strand at 6032.091 kb on - strand at 6032.091 kb on - strand at 6032.091 kb on - strand at 6032.093 kb on - strand at 6032.469 kb on - strand, within Pf6N2E2_5234 at 6032.507 kb on + strand, within Pf6N2E2_5234 at 6032.507 kb on + strand, within Pf6N2E2_5234 at 6032.507 kb on + strand, within Pf6N2E2_5234 at 6032.508 kb on - strand, within Pf6N2E2_5234 at 6032.508 kb on - strand, within Pf6N2E2_5234 at 6032.508 kb on - strand, within Pf6N2E2_5234 at 6032.508 kb on - strand, within Pf6N2E2_5234 at 6032.508 kb on - strand, within Pf6N2E2_5234 at 6032.508 kb on - strand, within Pf6N2E2_5234 at 6032.601 kb on - strand, within Pf6N2E2_5234 at 6032.907 kb on - strand, within Pf6N2E2_5234
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose (C) remove 6,029,944 + -0.8 6,029,945 - +0.1 6,029,981 + -1.7 6,029,989 + +0.1 6,029,994 + +0.1 6,029,994 + -0.5 6,030,038 + +0.0 6,030,038 + -1.1 6,030,038 + -1.5 6,030,038 + -0.1 6,030,038 + +0.4 6,030,038 + -0.7 6,030,038 + -0.1 6,030,038 + +0.1 6,030,038 + +0.0 6,030,038 + -1.0 6,030,038 + -1.9 6,030,038 + -1.0 6,030,038 + +0.7 6,030,038 + -0.7 6,030,038 + -0.1 6,030,038 + -0.3 6,030,039 - -0.4 6,030,039 - +0.4 6,030,039 - +1.1 6,030,039 - +0.6 6,030,039 - +0.1 6,030,039 - -0.0 6,030,039 - +0.6 6,030,039 - -0.0 6,030,039 - +1.5 6,030,039 - -0.1 6,030,039 - +0.1 6,030,039 - +0.5 6,030,039 - +0.3 6,030,164 + Pf6N2E2_5232 0.15 -1.3 6,030,164 + Pf6N2E2_5232 0.15 -0.7 6,030,164 + Pf6N2E2_5232 0.15 -1.5 6,030,164 + Pf6N2E2_5232 0.15 -0.4 6,030,164 + Pf6N2E2_5232 0.15 +0.7 6,030,164 + Pf6N2E2_5232 0.15 -0.8 6,030,165 - Pf6N2E2_5232 0.15 +1.4 6,030,165 - Pf6N2E2_5232 0.15 +0.5 6,030,165 - Pf6N2E2_5232 0.15 +0.9 6,030,165 - Pf6N2E2_5232 0.15 +1.3 6,030,494 + Pf6N2E2_5232 0.51 -1.4 6,030,495 - Pf6N2E2_5232 0.52 +0.9 6,030,591 + Pf6N2E2_5232 0.62 +0.3 6,030,627 + Pf6N2E2_5232 0.66 +2.6 6,030,627 + Pf6N2E2_5232 0.66 +0.2 6,030,628 - Pf6N2E2_5232 0.66 +1.6 6,030,688 + Pf6N2E2_5232 0.73 -0.6 6,030,688 + Pf6N2E2_5232 0.73 +0.6 6,030,688 + Pf6N2E2_5232 0.73 -2.5 6,030,688 + Pf6N2E2_5232 0.73 -0.1 6,030,688 + Pf6N2E2_5232 0.73 -2.1 6,030,689 - Pf6N2E2_5232 0.73 +1.5 6,030,689 - Pf6N2E2_5232 0.73 -0.4 6,030,689 - Pf6N2E2_5232 0.73 +0.5 6,030,690 + Pf6N2E2_5232 0.73 -2.4 6,030,690 + Pf6N2E2_5232 0.73 -3.3 6,030,690 + Pf6N2E2_5232 0.73 -0.0 6,030,690 + Pf6N2E2_5232 0.73 -3.5 6,030,690 + Pf6N2E2_5232 0.73 -0.7 6,030,690 + Pf6N2E2_5232 0.73 -1.2 6,030,690 + Pf6N2E2_5232 0.73 -0.8 6,030,749 + Pf6N2E2_5232 0.80 -0.0 6,030,749 + Pf6N2E2_5232 0.80 -1.2 6,030,749 + Pf6N2E2_5232 0.80 -1.0 6,030,749 + Pf6N2E2_5232 0.80 +0.4 6,030,749 + Pf6N2E2_5232 0.80 -2.4 6,030,749 + Pf6N2E2_5232 0.80 -0.1 6,030,749 + Pf6N2E2_5232 0.80 -1.5 6,030,749 + Pf6N2E2_5232 0.80 +2.0 6,031,967 + -2.8 6,031,967 + +0.4 6,031,967 + +0.1 6,031,970 + +0.0 6,031,971 - +1.4 6,032,072 + +0.5 6,032,072 + -1.2 6,032,072 + +2.9 6,032,073 - +0.4 6,032,073 - +1.7 6,032,073 - +0.2 6,032,090 + -1.1 6,032,090 + +0.5 6,032,090 + -0.0 6,032,090 + +1.2 6,032,090 + +0.3 6,032,091 - +1.8 6,032,091 - +2.0 6,032,091 - -0.8 6,032,091 - +0.7 6,032,091 - -0.3 6,032,091 - -0.2 6,032,093 - -0.8 6,032,469 - Pf6N2E2_5234 0.30 -1.7 6,032,507 + Pf6N2E2_5234 0.33 +1.7 6,032,507 + Pf6N2E2_5234 0.33 -0.0 6,032,507 + Pf6N2E2_5234 0.33 -0.6 6,032,508 - Pf6N2E2_5234 0.33 +0.3 6,032,508 - Pf6N2E2_5234 0.33 -0.4 6,032,508 - Pf6N2E2_5234 0.33 -0.5 6,032,508 - Pf6N2E2_5234 0.33 +0.5 6,032,508 - Pf6N2E2_5234 0.33 -0.4 6,032,508 - Pf6N2E2_5234 0.33 +0.8 6,032,601 - Pf6N2E2_5234 0.40 +2.0 6,032,907 - Pf6N2E2_5234 0.64 -0.3
Or see this region's nucleotide sequence