Experiment: D-Galactose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_5219 and Pf6N2E2_5220 are separated by 250 nucleotides Pf6N2E2_5220 and Pf6N2E2_5221 overlap by 4 nucleotides
Pf6N2E2_5219 - FIG140336: TPR domain protein, at 6,016,736 to 6,018,442
_5219
Pf6N2E2_5220 - Glutamyl-tRNA reductase (EC 1.2.1.70), at 6,018,693 to 6,019,922
_5220
Pf6N2E2_5221 - Peptide chain release factor 1, at 6,019,919 to 6,021,001
_5221
Position (kb)
6018
6019
6020 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 6018.043 kb on - strand, within Pf6N2E2_5219 at 6018.043 kb on - strand, within Pf6N2E2_5219 at 6018.043 kb on - strand, within Pf6N2E2_5219 at 6018.043 kb on - strand, within Pf6N2E2_5219 at 6018.043 kb on - strand, within Pf6N2E2_5219 at 6018.043 kb on - strand, within Pf6N2E2_5219 at 6018.043 kb on - strand, within Pf6N2E2_5219 at 6018.043 kb on - strand, within Pf6N2E2_5219 at 6018.061 kb on - strand, within Pf6N2E2_5219 at 6018.175 kb on - strand, within Pf6N2E2_5219 at 6018.241 kb on - strand, within Pf6N2E2_5219 at 6018.241 kb on - strand, within Pf6N2E2_5219 at 6018.241 kb on - strand, within Pf6N2E2_5219 at 6018.241 kb on - strand, within Pf6N2E2_5219 at 6018.241 kb on - strand, within Pf6N2E2_5219 at 6018.331 kb on - strand at 6018.455 kb on - strand at 6018.455 kb on - strand at 6018.455 kb on - strand at 6018.455 kb on - strand at 6018.455 kb on - strand at 6018.455 kb on - strand at 6018.455 kb on - strand at 6018.455 kb on - strand at 6018.461 kb on - strand at 6018.461 kb on - strand at 6018.461 kb on - strand at 6018.463 kb on - strand at 6018.463 kb on - strand at 6018.463 kb on - strand at 6018.463 kb on - strand at 6018.521 kb on + strand at 6018.538 kb on + strand at 6018.539 kb on - strand at 6018.539 kb on - strand at 6018.592 kb on + strand at 6018.592 kb on + strand at 6018.618 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose (C) remove 6,018,043 - Pf6N2E2_5219 0.77 -1.1 6,018,043 - Pf6N2E2_5219 0.77 -0.8 6,018,043 - Pf6N2E2_5219 0.77 -0.3 6,018,043 - Pf6N2E2_5219 0.77 -0.3 6,018,043 - Pf6N2E2_5219 0.77 -2.7 6,018,043 - Pf6N2E2_5219 0.77 +1.2 6,018,043 - Pf6N2E2_5219 0.77 +0.1 6,018,043 - Pf6N2E2_5219 0.77 -0.8 6,018,061 - Pf6N2E2_5219 0.78 -2.3 6,018,175 - Pf6N2E2_5219 0.84 -2.5 6,018,241 - Pf6N2E2_5219 0.88 -0.8 6,018,241 - Pf6N2E2_5219 0.88 -2.9 6,018,241 - Pf6N2E2_5219 0.88 -2.0 6,018,241 - Pf6N2E2_5219 0.88 -3.0 6,018,241 - Pf6N2E2_5219 0.88 -3.6 6,018,331 - -2.5 6,018,455 - -1.6 6,018,455 - -2.9 6,018,455 - -0.5 6,018,455 - -1.3 6,018,455 - -2.0 6,018,455 - -2.4 6,018,455 - -0.9 6,018,455 - -0.9 6,018,461 - -0.6 6,018,461 - -0.0 6,018,461 - +1.5 6,018,463 - +0.8 6,018,463 - -1.5 6,018,463 - -2.1 6,018,463 - -0.9 6,018,521 + -1.0 6,018,538 + -1.4 6,018,539 - +2.1 6,018,539 - +1.5 6,018,592 + -0.4 6,018,592 + -0.3 6,018,618 + -1.5
Or see this region's nucleotide sequence