Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2888

Experiment: D-Galactose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Galactose (C)
3,375,251	+		Pf6N2E2_2887	0.40	+0.1
3,375,280	-		Pf6N2E2_2887	0.44	+0.0
3,375,513	+		Pf6N2E2_2887	0.71	-1.7
3,375,513	+		Pf6N2E2_2887	0.71	+0.3
3,375,514	-		Pf6N2E2_2887	0.71	-0.3
3,375,514	-		Pf6N2E2_2887	0.71	-2.0
3,375,514	-		Pf6N2E2_2887	0.71	-1.1
3,375,744	-				-1.6
3,375,787	+				+0.8
3,375,787	+				+0.5
3,375,788	-				+0.8
3,375,788	-				+1.5
3,375,788	-				+2.2
3,375,795	+				+1.0
3,375,795	+				+2.1
3,375,795	+				+0.1
3,375,795	+				+1.2
3,375,795	+				+1.5
3,375,795	+				+0.1
3,375,795	+				+0.5
3,375,795	+				+0.8
3,375,795	+				+1.6
3,375,796	-				+0.4
3,375,796	-				+1.3
3,375,796	-				+0.8
3,375,796	-				-0.1
3,375,796	-				+0.5
3,375,796	-				-0.4
3,375,796	-				+0.7
3,375,799	+				-0.2
3,375,799	+				+0.6
3,375,799	+				+0.6
3,375,799	+				+2.2
3,375,799	+				+0.9
3,375,799	+				+2.6
3,375,800	-				+1.9
3,375,800	-				+2.6
3,375,800	-				+0.6
3,375,800	-				+0.6
3,375,800	-				+2.3
3,375,800	-				+2.6
3,375,800	-				+1.7
3,375,800	-				+1.4
3,375,800	-				+2.5
3,375,807	+				+0.7
3,375,807	+				+1.2
3,375,808	-				-1.3
3,375,808	-				+0.0
3,375,808	-				+0.9
3,375,961	+				+1.0
3,375,961	+				+1.7
3,375,961	+				+0.7
3,375,962	-				+1.4
3,375,962	-				+1.5
3,375,962	-				+0.6
3,376,004	+				+3.1
3,376,004	+				+4.1
3,376,004	+				+2.7
3,376,004	+				+3.1
3,376,005	-				+4.4
3,376,014	+				+2.8
3,376,014	+				+3.6
3,376,015	-				+4.3
3,376,015	-				+4.2
3,376,015	-				+4.2
3,376,015	-				+3.6
3,376,015	-				+4.9
3,376,015	-				+4.2
3,376,027	-				+3.7
3,376,041	-				+3.6
3,376,115	+				+1.5
3,376,115	+				+0.3
3,376,115	+				+1.1
3,376,115	+				-0.7
3,376,115	+				+0.7
3,376,115	+				+1.3
3,376,115	+				-0.4
3,376,115	+				+1.5
3,376,115	+				+1.7
3,376,115	+				+1.3
3,376,115	+				+1.6
3,376,115	+				+0.4
3,376,115	+				+2.3
3,376,116	-				+1.4
3,376,116	-				+2.1
3,376,116	-				-0.1
3,376,116	-				+1.3
3,376,116	-				+1.7
3,376,116	-				+2.2
3,376,116	-				+1.2
3,376,116	-				+0.5
3,376,116	-				-0.6
3,376,116	-				+1.1
3,376,116	-				+1.8
3,376,163	+				+2.1
3,376,163	+				+1.6
3,376,164	-				+1.8
3,376,164	-				+2.2
3,376,164	-				+1.4
3,376,164	-				+0.3
3,376,175	+		Pf6N2E2_2888	0.10	+1.2
3,376,175	+		Pf6N2E2_2888	0.10	+1.2
3,376,175	+		Pf6N2E2_2888	0.10	+0.5
3,376,175	+		Pf6N2E2_2888	0.10	-0.6
3,376,175	+		Pf6N2E2_2888	0.10	+1.1
3,376,176	-		Pf6N2E2_2888	0.10	+2.1
3,376,176	-		Pf6N2E2_2888	0.10	+0.7
3,376,181	+		Pf6N2E2_2888	0.11	-1.1
3,376,181	+		Pf6N2E2_2888	0.11	-0.3
3,376,182	-		Pf6N2E2_2888	0.11	+0.4
3,376,182	-		Pf6N2E2_2888	0.11	+1.8
3,376,182	-		Pf6N2E2_2888	0.11	+1.0
3,376,220	+		Pf6N2E2_2888	0.13	+0.3
3,376,221	-		Pf6N2E2_2888	0.14	+1.3
3,376,221	-		Pf6N2E2_2888	0.14	+1.5
3,376,221	-		Pf6N2E2_2888	0.14	+0.9
3,376,343	+		Pf6N2E2_2888	0.23	+3.7
3,376,344	-		Pf6N2E2_2888	0.23	+3.3
3,376,344	-		Pf6N2E2_2888	0.23	+4.0
3,376,344	-		Pf6N2E2_2888	0.23	+3.9
3,376,364	+		Pf6N2E2_2888	0.24	+2.9
3,376,364	+		Pf6N2E2_2888	0.24	+1.4
3,376,364	+		Pf6N2E2_2888	0.24	+2.2
3,376,364	+		Pf6N2E2_2888	0.24	+2.4
3,376,365	-		Pf6N2E2_2888	0.24	+1.2
3,376,365	-		Pf6N2E2_2888	0.24	+2.6
3,376,492	-		Pf6N2E2_2888	0.34	+2.6
3,376,580	+		Pf6N2E2_2888	0.40	+1.4
3,376,580	+		Pf6N2E2_2888	0.40	+1.5
3,376,580	+		Pf6N2E2_2888	0.40	+1.6
3,376,580	+		Pf6N2E2_2888	0.40	+1.1
3,376,580	+		Pf6N2E2_2888	0.40	+1.5
3,376,580	+		Pf6N2E2_2888	0.40	+1.9
3,376,580	+		Pf6N2E2_2888	0.40	+2.5
3,376,580	+		Pf6N2E2_2888	0.40	+1.5
3,376,580	+		Pf6N2E2_2888	0.40	+1.4
3,376,581	-		Pf6N2E2_2888	0.40	+2.2
3,376,581	-		Pf6N2E2_2888	0.40	+2.0
3,376,581	-		Pf6N2E2_2888	0.40	+1.2
3,376,581	-		Pf6N2E2_2888	0.40	+1.4
3,376,581	-		Pf6N2E2_2888	0.40	+1.9
3,376,581	-		Pf6N2E2_2888	0.40	+1.7
3,376,581	-		Pf6N2E2_2888	0.40	+1.4
3,376,581	-		Pf6N2E2_2888	0.40	+2.5
3,376,581	-		Pf6N2E2_2888	0.40	+2.6
3,376,581	-		Pf6N2E2_2888	0.40	+2.2
3,376,581	-		Pf6N2E2_2888	0.40	+3.5
3,376,595	+		Pf6N2E2_2888	0.41	+0.7
3,376,595	+		Pf6N2E2_2888	0.41	-3.2
3,376,663	-		Pf6N2E2_2888	0.46	+2.8
3,376,739	+		Pf6N2E2_2888	0.52	+3.6
3,376,739	+		Pf6N2E2_2888	0.52	+1.7
3,376,740	-		Pf6N2E2_2888	0.52	+3.0
3,376,740	-		Pf6N2E2_2888	0.52	+3.1
3,376,760	+		Pf6N2E2_2888	0.54	+2.8
3,376,761	-		Pf6N2E2_2888	0.54	+3.5
3,376,761	-		Pf6N2E2_2888	0.54	+3.1
3,376,761	-		Pf6N2E2_2888	0.54	+2.8
3,376,761	-		Pf6N2E2_2888	0.54	+3.9
3,376,799	+		Pf6N2E2_2888	0.56	+3.5
3,376,806	+		Pf6N2E2_2888	0.57	+2.8
3,376,806	+		Pf6N2E2_2888	0.57	+2.1
3,376,806	+		Pf6N2E2_2888	0.57	+3.2
3,376,807	-		Pf6N2E2_2888	0.57	+3.6
3,376,807	-		Pf6N2E2_2888	0.57	+4.2
3,376,899	-		Pf6N2E2_2888	0.64	+3.4
3,376,982	+		Pf6N2E2_2888	0.70	+4.1
3,376,982	+		Pf6N2E2_2888	0.70	+5.1
3,376,983	-		Pf6N2E2_2888	0.70	+4.1
3,377,055	+		Pf6N2E2_2888	0.75	+4.1
3,377,089	-		Pf6N2E2_2888	0.78	+3.6
3,377,358	+				+4.1
3,377,359	-				+2.7
3,377,359	-				+5.1
3,377,359	-				+3.9
3,377,359	-				+3.4
3,377,359	-				+3.6
3,377,370	+				+4.8
3,377,371	-				+4.3
3,377,389	+				+3.7
3,377,389	+				+3.3
3,377,389	+				+4.2
3,377,404	-				+4.1
3,377,404	-				+2.8
3,377,404	-				+4.0
3,377,409	+				+3.9
3,377,410	-				+2.3
3,377,410	-				+1.9
3,377,410	-				+1.8
3,377,412	+				+3.5
3,377,412	+				+3.5
3,377,412	+				+3.1
3,377,412	+				+3.2
3,377,412	+				+3.8
3,377,413	-				+2.1
3,377,413	-				+3.1
3,377,413	-				+2.1
3,377,413	-				+2.1
3,377,423	-				+2.0
3,377,437	-				+1.6
3,377,473	+				+4.0
3,377,474	-				-0.1
3,377,474	-				+0.2
3,377,474	-				-0.1
3,377,609	+				+0.6
3,377,609	+				+0.7
3,377,609	+				+0.8
3,377,609	+				+0.0
3,378,006	+		Pf6N2E2_2889	0.42	+0.8
3,378,006	+		Pf6N2E2_2889	0.42	-0.4
3,378,006	+		Pf6N2E2_2889	0.42	+0.1
3,378,006	+		Pf6N2E2_2889	0.42	+0.9
3,378,006	+		Pf6N2E2_2889	0.42	+0.5
3,378,006	+		Pf6N2E2_2889	0.42	+0.5
3,378,006	+		Pf6N2E2_2889	0.42	+0.1
3,378,006	+		Pf6N2E2_2889	0.42	+0.7
3,378,006	+		Pf6N2E2_2889	0.42	+0.4
3,378,006	+		Pf6N2E2_2889	0.42	+0.8
3,378,007	-		Pf6N2E2_2889	0.42	-0.8
3,378,007	-		Pf6N2E2_2889	0.42	-2.1
3,378,007	-		Pf6N2E2_2889	0.42	-1.1
3,378,007	-		Pf6N2E2_2889	0.42	-1.4
3,378,007	-		Pf6N2E2_2889	0.42	-1.0
3,378,007	-		Pf6N2E2_2889	0.42	-1.4
3,378,007	-		Pf6N2E2_2889	0.42	-0.8
3,378,007	-		Pf6N2E2_2889	0.42	-0.8
3,378,007	-		Pf6N2E2_2889	0.42	+2.7
3,378,007	-		Pf6N2E2_2889	0.42	-0.5
3,378,007	-		Pf6N2E2_2889	0.42	-0.7
3,378,105	+		Pf6N2E2_2889	0.51	+0.7
3,378,105	+		Pf6N2E2_2889	0.51	+1.0
3,378,105	+		Pf6N2E2_2889	0.51	-0.1
3,378,105	+		Pf6N2E2_2889	0.51	-1.8
3,378,106	-		Pf6N2E2_2889	0.51	-0.1
3,378,106	-		Pf6N2E2_2889	0.51	-0.7
3,378,106	-		Pf6N2E2_2889	0.51	-0.1
3,378,207	+		Pf6N2E2_2889	0.60	+0.4
3,378,208	-		Pf6N2E2_2889	0.60	-0.1
3,378,208	-		Pf6N2E2_2889	0.60	+1.1